CF835105

Overview
NameCF835105
Unique NameCF835105
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length633
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF835105 vs. ExPASy Swiss-Prot
Match: DNAJ_ECO55 (Chaperone protein dnaJ OS=Escherichia coli (strain 55989 / EAEC) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.047e-11
Identity = 32/66 (48.48%), Postives = 46/66 (69.70%), Query Frame = 3 
Query:  141 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 338
            YY ILG+ K A   +I+ AY +LAMK+HPDR+  +     EA+ +F++I+EAY VL+D  KR+ YD
Sbjct:    6 YYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDK----EAEAKFKEIKEAYEVLTDSQKRAAYD 67
[Close]
BLAST of CF835105 vs. ExPASy Swiss-Prot
Match: DNAJ_ECO45 (Chaperone protein dnaJ OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.047e-11
Identity = 32/66 (48.48%), Postives = 46/66 (69.70%), Query Frame = 3 
Query:  141 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 338
            YY ILG+ K A   +I+ AY +LAMK+HPDR+  +     EA+ +F++I+EAY VL+D  KR+ YD
Sbjct:    6 YYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDK----EAEAKFKEIKEAYEVLTDSQKRAAYD 67
[Close]
BLAST of CF835105 vs. ExPASy Swiss-Prot
Match: DNAJ_ECO27 (Chaperone protein dnaJ OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.047e-11
Identity = 32/66 (48.48%), Postives = 46/66 (69.70%), Query Frame = 3 
Query:  141 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 338
            YY ILG+ K A   +I+ AY +LAMK+HPDR+  +     EA+ +F++I+EAY VL+D  KR+ YD
Sbjct:    6 YYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDK----EAEAKFKEIKEAYEVLTDSQKRAAYD 67
[Close]
BLAST of CF835105 vs. ExPASy Swiss-Prot
Match: DNAJ_ECO24 (Chaperone protein dnaJ OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.047e-11
Identity = 32/66 (48.48%), Postives = 46/66 (69.70%), Query Frame = 3 
Query:  141 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 338
            YY ILG+ K A   +I+ AY +LAMK+HPDR+  +     EA+ +F++I+EAY VL+D  KR+ YD
Sbjct:    6 YYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDK----EAEAKFKEIKEAYEVLTDSQKRAAYD 67
[Close]
BLAST of CF835105 vs. ExPASy Swiss-Prot
Match: DNAJ_BURVG (Chaperone protein dnaJ OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.047e-11
Identity = 32/66 (48.48%), Postives = 46/66 (69.70%), Query Frame = 3 
Query:  141 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 338
            YY +LG+ K+AS  +I+ AY KLAMK+HPDR+  N     +A+  F++ +EAY +LSD  KR+ YD
Sbjct:    6 YYEVLGVAKNASDDEIKKAYRKLAMKYHPDRNPDNK----DAEEHFKEAKEAYEMLSDGQKRAAYD 67
[Close]
BLAST of CF835105 vs. ExPASy Swiss-Prot
Match: DNAJ_BURS3 (Chaperone protein dnaJ OS=Burkholderia sp. (strain 383) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.047e-11
Identity = 31/66 (46.97%), Postives = 46/66 (69.70%), Query Frame = 3 
Query:  141 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 338
            YY +LG+ K+A   +I+ AY KLAMK+HPDR+  N     +A+  F++++EAY +LSD  KR+ YD
Sbjct:    6 YYEVLGVAKNAGDDEIKKAYRKLAMKYHPDRNPDNK----DAEEHFKEVKEAYEMLSDGQKRAAYD 67
[Close]
BLAST of CF835105 vs. ExPASy Swiss-Prot
Match: DNAJ_BACCN (Chaperone protein dnaJ OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.047e-11
Identity = 32/66 (48.48%), Postives = 44/66 (66.67%), Query Frame = 3 
Query:  141 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 338
            YY +LG+ K AS  +I+ AY +LA K+HPD S +   V      +F+++QEAY VLSDE KR+ YD
Sbjct:    6 YYEVLGVSKSASKDEIKKAYRRLAKKYHPDVSKEENAVE-----KFKEVQEAYEVLSDEQKRAQYD 66
[Close]
BLAST of CF835105 vs. ExPASy Swiss-Prot
Match: DNAJ_AZOSB (Chaperone protein dnaJ OS=Azoarcus sp. (strain BH72) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.047e-11
Identity = 33/66 (50.00%), Postives = 46/66 (69.70%), Query Frame = 3 
Query:  141 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 338
            YY +LG+ +DA   +I+ AY KLAMK+HPDR   NP  + EA+ +F++ +EAY VLSD  K+  YD
Sbjct:    6 YYEVLGVNRDAGDDEIKKAYRKLAMKYHPDR---NPD-SKEAEEKFKEAKEAYEVLSDAQKKGAYD 67
The following BLAST results are available for this feature:
BLAST of CF835105 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 188
Match NameE-valueIdentityDescription
DNAJ_ECO559.047e-1148.48Chaperone protein dnaJ OS=Escherichia coli (strain... [more]
DNAJ_ECO459.047e-1148.48Chaperone protein dnaJ OS=Escherichia coli O45:K1 ... [more]
DNAJ_ECO279.047e-1148.48Chaperone protein dnaJ OS=Escherichia coli O127:H6... [more]
DNAJ_ECO249.047e-1148.48Chaperone protein dnaJ OS=Escherichia coli O139:H2... [more]
DNAJ_BURVG9.047e-1148.48Chaperone protein dnaJ OS=Burkholderia vietnamiens... [more]
DNAJ_BURS39.047e-1146.97Chaperone protein dnaJ OS=Burkholderia sp. (strain... [more]
DNAJ_BACCN9.047e-1148.48Chaperone protein dnaJ OS=Bacillus cereus subsp. c... [more]
DNAJ_AZOSB9.047e-1150.00Chaperone protein dnaJ OS=Azoarcus sp. (strain BH7... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06K24_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06K24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835105 ID=CF835105; Name=CF835105; organism=Citrus sinensis; type=EST; length=633bp
TCTAATGCTCCCTTATAACAGTTTGTTTCCGTTTCTTCATATGATTTTAT
CTTGACAAGCATATTACATCCTTATTGCTGTTTTCTTTTTTGGTTGCTGT
GATGGATGGAGGAGGAGGATCCAACGGCGGATCTTTGAGCTACTACGCGA
TTCTTGGGATTCGCAAGGACGCCTCCTTCTCTGACATTCGCTCCGCTTAT
CACAAGCTCGCCATGAAATGGCATCCGGATAGGAGTGCGAAGAACCCGGG
AGTGGCCGGGGAAGCCAAATGCCGGTTTCAGCAAATTCAAGAAGCTTACT
CCGTCCTCTCTGATGAGAACAAGAGGTCAATGTACGATGCTGGACTCTAT
GATCCCCTTGAGGAAGAAGATGAGGACTTCTATGGTTTTGTGCAAGAGAT
GGTCTCCATGATGAATAATGTTAAAGACGAGGGGGACAGTTTTGAGGACC
TCCAAAGGATGTTCGTGGAAATGGTGGATGGGATGAGCTTCGACTTTAAT
TATGATCCTACGGACGCGCAAAGAGCATGTGTCAACACATCAAAGGGTAA
AGCGGCCAAGCGCGGTACTTCTCGTTGCTGACAATCGCTCTGGATCATCT
CTGATCATTCAAGCTAATGATGATGTTGTTGAT
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