CF835105

Overview
NameCF835105
Unique NameCF835105
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length633
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CF835105_ssr108 microsatellite CF835105_ssr108:108..119. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig4437 contig Csv1_Contig4437:157..789. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835105 vs. ExPASy Swiss-Prot
Match: DNAJ_FRAP2 (Chaperone protein dnaJ OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.069e-11
Identity = 48/161 (29.81%), Postives = 72/161 (44.72%), Query Frame = 3
Query:  141 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD---------------AGLYDPLEEEDEDFYGFVQEMVSMMNNVKDEGDSFEDLQRMFVEMVDGMSFDFNYDPTDAQRACVNTSKGKAAKRGTSRC 578
            YY IL + K AS  +I+ AY KLAMK+HPDR+  +     EA+ +F++I EAY +LSD+ KRS YD               AG +   E+  + F+G      S  +      D    ++    E   G+  + N    ++  +C  T      K     C
Sbjct:    6 YYEILNVSKTASGVEIKRAYRKLAMKYHPDRNPDDK----EAEIKFKEISEAYEILSDDGKRSRYDQFGHAGVNQQGGAGSAGGFGGFEDIFDTFFGGGTSRGSNRSRASRGSDLEYTIEISLEEAFFGVEKEINIPRMESCDSCDGTGSKSKTKTTCHAC 162          
BLAST of CF835105 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLTR (Chaperone protein dnaJ OS=Chlamydia trachomatis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.069e-11
Identity = 36/66 (54.55%), Postives = 46/66 (69.70%), Query Frame = 3
Query:  141 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 338
            YY ILG+ K A+  +I+ AY KLA+K+HPD   KNPG A EA+ RF+++ EAY VL D  KR  YD
Sbjct:    3 YYTILGVAKTATPEEIKKAYRKLAVKYHPD---KNPGDA-EAERRFKEVSEAYEVLGDAQKRESYD 64          
BLAST of CF835105 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLTB (Chaperone protein dnaJ OS=Chlamydia trachomatis (strain L2b/UCH-1/proctitis) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.069e-11
Identity = 36/66 (54.55%), Postives = 46/66 (69.70%), Query Frame = 3
Query:  141 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 338
            YY ILG+ K A+  +I+ AY KLA+K+HPD   KNPG A EA+ RF+++ EAY VL D  KR  YD
Sbjct:    3 YYTILGVAKTATPEEIKKAYRKLAVKYHPD---KNPGDA-EAERRFKEVSEAYEVLGDAQKRESYD 64          
BLAST of CF835105 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLTA (Chaperone protein dnaJ OS=Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.069e-11
Identity = 36/66 (54.55%), Postives = 46/66 (69.70%), Query Frame = 3
Query:  141 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 338
            YY ILG+ K A+  +I+ AY KLA+K+HPD   KNPG A EA+ RF+++ EAY VL D  KR  YD
Sbjct:    3 YYTILGVAKTATPEEIKKAYRKLAVKYHPD---KNPGDA-EAERRFKEVSEAYEVLGDAQKRESYD 64          
BLAST of CF835105 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLT2 (Chaperone protein dnaJ OS=Chlamydia trachomatis (strain L2/434/Bu / ATCC VR-902B) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.069e-11
Identity = 36/66 (54.55%), Postives = 46/66 (69.70%), Query Frame = 3
Query:  141 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 338
            YY ILG+ K A+  +I+ AY KLA+K+HPD   KNPG A EA+ RF+++ EAY VL D  KR  YD
Sbjct:    3 YYTILGVAKTATPEEIKKAYRKLAVKYHPD---KNPGDA-EAERRFKEVSEAYEVLGDAQKRESYD 64          
BLAST of CF835105 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLMU (Chaperone protein dnaJ OS=Chlamydia muridarum GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.069e-11
Identity = 36/66 (54.55%), Postives = 46/66 (69.70%), Query Frame = 3
Query:  141 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 338
            YY ILG+ K A+  +I+ AY KLA+K+HPD   KNPG A EA+ RF+++ EAY VL D  KR  YD
Sbjct:    3 YYTILGVAKTATPEEIKKAYRKLAVKYHPD---KNPGDA-EAERRFKEVSEAYEVLGDAQKRESYD 64          
BLAST of CF835105 vs. ExPASy Swiss-Prot
Match: TID_DROME (Protein tumorous imaginal discs, mitochondrial OS=Drosophila melanogaster GN=l(2)tid PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.396e-11
Identity = 33/66 (50.00%), Postives = 47/66 (71.21%), Query Frame = 3
Query:  141 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 338
            YYA LG+ K+A+  DI+ AY++LA K+HPD + ++P    +A  +FQ++ EAY VLSDE KR  YD
Sbjct:   66 YYATLGVAKNANGKDIKKAYYQLAKKYHPDTNKEDP----DAGRKFQEVSEAYEVLSDEQKRREYD 127          
BLAST of CF835105 vs. ExPASy Swiss-Prot
Match: DNAJ_WOLSU (Chaperone protein dnaJ OS=Wolinella succinogenes GN=dnaJ PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.396e-11
Identity = 45/114 (39.47%), Postives = 63/114 (55.26%), Query Frame = 3
Query:  141 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDAGLYDPLEEEDEDFYGFVQEMVSMMNNVKDEGDSFEDLQRMFVEMVDG 482
            YY IL I + AS  +I+ AY K+AMK+HPDR   N G + EA+  F+++ EAY VLSDE KR +YD   Y     E + + GF         + +   D F+DL  +F  +  G
Sbjct:    6 YYEILEIERSASGEEIKKAYRKMAMKYHPDR---NEG-SSEAEEMFKRVNEAYQVLSDEGKRQLYDR--YGKQGLESQGYSGF---------SGRGFEDVFDDLGSIFDSVFGG 104          
BLAST of CF835105 vs. ExPASy Swiss-Prot
Match: DNAJ_ALHEH (Chaperone protein dnaJ OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.396e-11
Identity = 34/66 (51.52%), Postives = 48/66 (72.73%), Query Frame = 3
Query:  141 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 338
            YY  LG+ ++AS S+I+ AY ++AMK+HPDR   NPG   EA+ RF++ +EAY +LSD  KR+ YD
Sbjct:    6 YYEALGVARNASDSEIKKAYRRMAMKYHPDR---NPG-DKEAEARFKEAKEAYEILSDPQKRAAYD 67          
BLAST of CF835105 vs. ExPASy Swiss-Prot
Match: DJC21_HUMAN (DnaJ homolog subfamily C member 21 OS=Homo sapiens GN=DNAJC21 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.396e-11
Identity = 33/66 (50.00%), Postives = 46/66 (69.70%), Query Frame = 3
Query:  141 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 338
            +Y  LG+R+DAS  +++ AY KLA+KWHPD++  N   A EA  +F+ IQ AY VLSD  +R+ YD
Sbjct:    4 HYEALGVRRDASEEELKKAYRKLALKWHPDKNLDN---AAEAAEQFKLIQAAYDVLSDPQERAWYD 66          
The following BLAST results are available for this feature:
BLAST of CF835105 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 188
Match NameE-valueIdentityDescription
DNAJ_FRAP21.069e-1129.81Chaperone protein dnaJ OS=Francisella philomiragia... [more]
DNAJ_CHLTR1.069e-1154.55Chaperone protein dnaJ OS=Chlamydia trachomatis GN... [more]
DNAJ_CHLTB1.069e-1154.55Chaperone protein dnaJ OS=Chlamydia trachomatis (s... [more]
DNAJ_CHLTA1.069e-1154.55Chaperone protein dnaJ OS=Chlamydia trachomatis (s... [more]
DNAJ_CHLT21.069e-1154.55Chaperone protein dnaJ OS=Chlamydia trachomatis (s... [more]
DNAJ_CHLMU1.069e-1154.55Chaperone protein dnaJ OS=Chlamydia muridarum GN=d... [more]
TID_DROME1.396e-1150.00Protein tumorous imaginal discs, mitochondrial OS=... [more]
DNAJ_WOLSU1.396e-1139.47Chaperone protein dnaJ OS=Wolinella succinogenes G... [more]
DNAJ_ALHEH1.396e-1151.52Chaperone protein dnaJ OS=Alkalilimnicola ehrliche... [more]
DJC21_HUMAN1.396e-1150.00DnaJ homolog subfamily C member 21 OS=Homo sapiens... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06K24_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06K24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835105 ID=CF835105; Name=CF835105; organism=Citrus sinensis; type=EST; length=633bp
TCTAATGCTCCCTTATAACAGTTTGTTTCCGTTTCTTCATATGATTTTAT
CTTGACAAGCATATTACATCCTTATTGCTGTTTTCTTTTTTGGTTGCTGT
GATGGATGGAGGAGGAGGATCCAACGGCGGATCTTTGAGCTACTACGCGA
TTCTTGGGATTCGCAAGGACGCCTCCTTCTCTGACATTCGCTCCGCTTAT
CACAAGCTCGCCATGAAATGGCATCCGGATAGGAGTGCGAAGAACCCGGG
AGTGGCCGGGGAAGCCAAATGCCGGTTTCAGCAAATTCAAGAAGCTTACT
CCGTCCTCTCTGATGAGAACAAGAGGTCAATGTACGATGCTGGACTCTAT
GATCCCCTTGAGGAAGAAGATGAGGACTTCTATGGTTTTGTGCAAGAGAT
GGTCTCCATGATGAATAATGTTAAAGACGAGGGGGACAGTTTTGAGGACC
TCCAAAGGATGTTCGTGGAAATGGTGGATGGGATGAGCTTCGACTTTAAT
TATGATCCTACGGACGCGCAAAGAGCATGTGTCAACACATCAAAGGGTAA
AGCGGCCAAGCGCGGTACTTCTCGTTGCTGACAATCGCTCTGGATCATCT
CTGATCATTCAAGCTAATGATGATGTTGTTGAT
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