CF835114

Overview
NameCF835114
Unique NameCF835114
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length607
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835114 vs. ExPASy Swiss-Prot
Match: PLAS_ENTPR (Plastocyanin OS=Enteromorpha prolifera GN=PETE PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.085e-26
Identity = 58/96 (60.42%), Postives = 68/96 (70.83%), Query Frame = -3
Query:  177 VLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSLYCSPHQGAGMVGQVTV 464
            V LGGDDGSLAFVP++ +V +GE I F NNAGFPHN+VFDED +P+GVD   I  S ED LN  G+T    LT  GTY +YC PH GAGM   +TV
Sbjct:    4 VKLGGDDGSLAFVPNNITVGAGESIEFINNAGFPHNIVFDEDAVPAGVDADAI--SAEDYLNSKGQTVVRKLTTPGTYGVYCDPHSGAGMKMTITV 97          
BLAST of CF835114 vs. ExPASy Swiss-Prot
Match: PLAS_ULVPE (Plastocyanin OS=Ulva pertusa GN=PETE PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 4.121e-26
Identity = 58/96 (60.42%), Postives = 67/96 (69.79%), Query Frame = -3
Query:  177 VLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSLYCSPHQGAGMVGQVTV 464
            V LGGDDGSLAFVPS  SV++GE I F NNAGFPHN+VFDED +P+GVD   IS   +D LN  GET    L+  G Y +YC PH GAGM   +TV
Sbjct:    4 VKLGGDDGSLAFVPSKISVAAGEAIEFVNNAGFPHNIVFDEDAVPAGVDADAISY--DDYLNSKGETVVRKLSTPGVYGVYCEPHAGAGMKMTITV 97          
BLAST of CF835114 vs. ExPASy Swiss-Prot
Match: PLAS_ULVAR (Plastocyanin OS=Ulva arasakii GN=PETE PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 9.181e-26
Identity = 57/96 (59.38%), Postives = 67/96 (69.79%), Query Frame = -3
Query:  177 VLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSLYCSPHQGAGMVGQVTV 464
            V LGGDDG+LAFVPS  SV++GE I F NNAGFPHN+VFDED +P+GVD   IS   +D LN  GET    L+  G Y +YC PH GAGM   +TV
Sbjct:    4 VKLGGDDGALAFVPSKISVAAGEAIEFVNNAGFPHNIVFDEDAVPAGVDADAISY--DDYLNSKGETVVRKLSTPGVYGVYCEPHAGAGMKMTITV 97          
BLAST of CF835114 vs. ExPASy Swiss-Prot
Match: PLAS_CHLFU (Plastocyanin OS=Chlorella fusca GN=petE PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 9.181e-26
Identity = 52/98 (53.06%), Postives = 68/98 (69.39%), Query Frame = -3
Query:  177 IEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSLYCSPHQGAGMVGQVTV 470
            + V LG D G+L F PSS ++ +GE + + NNAGFPHN+VFDEDE+PSG +    ++S ED LN PGE+Y+      GTY  +C PHQGAGM G +TV
Sbjct:    2 VTVKLGADSGALVFEPSSVTIKAGETVTWVNNAGFPHNIVFDEDEVPSGANAE--ALSHEDYLNAPGESYSAKFDTAGTYGYFCEPHQGAGMKGTITV 97          
BLAST of CF835114 vs. ExPASy Swiss-Prot
Match: PLAS_SCEOB (Plastocyanin, chloroplastic OS=Scenedesmus obliquus GN=PETE PE=1 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 2.500e-23
Identity = 47/96 (48.96%), Postives = 66/96 (68.75%), Query Frame = -3
Query:  177 VLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSLYCSPHQGAGMVGQVTV 464
            V LG D G+L F P++ ++ +G+ + + NNAGFPHN+VFDED +P+GV+    ++S +D LN PGE+Y       G Y  +C PHQGAGMVG+V V
Sbjct:   51 VKLGADSGALVFEPATVTIKAGDSVTWTNNAGFPHNIVFDEDAVPAGVNAD--ALSHDDYLNAPGESYTAKFDTAGEYGYFCEPHQGAGMVGKVIV 144          
BLAST of CF835114 vs. ExPASy Swiss-Prot
Match: PLAS_CYAP7 (Plastocyanin OS=Cyanothece sp. (strain PCC 7424) GN=petE PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 5.395e-18
Identity = 42/96 (43.75%), Postives = 58/96 (60.42%), Query Frame = -3
Query:  177 VLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSLYCSPHQGAGMVGQVTV 464
            V +G D G L F P   ++ +G+ + + NN   PHN VFD  ++P  V  +KIS     L+  PGE++  T  E GTY+ YC PH+GAGMVG +TV
Sbjct:   33 VKMGSDQGLLKFDPPQLTIKAGDTVKWVNNKLAPHNAVFDNSKVPDSVSATKISHKA--LVFSPGESFTTTFDEPGTYTYYCEPHRGAGMVGTITV 126          
BLAST of CF835114 vs. ExPASy Swiss-Prot
Match: PLAS_SYNY3 (Plastocyanin OS=Synechocystis sp. (strain PCC 6803) GN=petE PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.960e-16
Identity = 43/97 (44.33%), Postives = 61/97 (62.89%), Query Frame = -3
Query:  177 VLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIPSGVDVSKIS-MSTEDLLNGPGETYAVTLTEKGTYSLYCSPHQGAGMVGQVTV 464
            V +G D G+L F PS+ ++ +GE++ + NN   PHN+VF  D    GVD    + +S + L    GE++  T TE GTY+ YC PH+GAGMVG+V V
Sbjct:   33 VKMGSDSGALVFEPSTVTIKAGEEVKWVNNKLSPHNIVFAAD----GVDADTAAKLSHKGLAFAAGESFTSTFTEPGTYTYYCEPHRGAGMVGKVVV 125          
BLAST of CF835114 vs. ExPASy Swiss-Prot
Match: PLAS_PHOLA (Plastocyanin OS=Phormidium laminosum GN=petE PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.866e-16
Identity = 39/99 (39.39%), Postives = 61/99 (61.62%), Query Frame = -3
Query:  177 VLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTE---KGTYSLYCSPHQGAGMVGQVTV 464
            V +G D G L F P++ +V  G+ + + NN   PHN++FD+ ++P         +S   L+  PGE+Y +T +     GTY+ YC+PH+GAGMVG++TV
Sbjct:   39 VKMGADSGLLQFEPANVTVHPGDTVKWVNNKLPPHNILFDDKQVPGASKELADKLSHSQLMFSPGESYEITFSSDFPAGTYTYYCAPHRGAGMVGKITV 137          
BLAST of CF835114 vs. ExPASy Swiss-Prot
Match: PLAS_SYNP6 (Plastocyanin OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=petE PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 8.613e-16
Identity = 39/98 (39.80%), Postives = 59/98 (60.20%), Query Frame = -3
Query:  177 IEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSLYCSPHQGAGMVGQVTV 470
            + + +G D+G LAF PS+  + +G+ + + NN   PHNVV +           +  +S +DL   PGET+  T +E GTY+ YC PH+GAGMVG++ V
Sbjct:   37 VAIKMGADNGMLAFEPSTIEIQAGDTVQWVNNKLAPHNVVVE----------GQPELSHKDLAFSPGETFEATFSEPGTYTYYCEPHRGAGMVGKIVV 124          
BLAST of CF835114 vs. ExPASy Swiss-Prot
Match: PLAS_SYNE7 (Plastocyanin OS=Synechococcus elongatus (strain PCC 7942) GN=petE PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 8.613e-16
Identity = 39/98 (39.80%), Postives = 59/98 (60.20%), Query Frame = -3
Query:  177 IEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSLYCSPHQGAGMVGQVTV 470
            + + +G D+G LAF PS+  + +G+ + + NN   PHNVV +           +  +S +DL   PGET+  T +E GTY+ YC PH+GAGMVG++ V
Sbjct:   37 VAIKMGADNGMLAFEPSTIEIQAGDTVQWVNNKLAPHNVVVE----------GQPELSHKDLAFSPGETFEATFSEPGTYTYYCEPHRGAGMVGKIVV 124          
The following BLAST results are available for this feature:
BLAST of CF835114 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
PLAS_ENTPR1.085e-2660.42Plastocyanin OS=Enteromorpha prolifera GN=PETE PE=... [more]
PLAS_ULVPE4.121e-2660.42Plastocyanin OS=Ulva pertusa GN=PETE PE=1 SV=1[more]
PLAS_ULVAR9.181e-2659.38Plastocyanin OS=Ulva arasakii GN=PETE PE=1 SV=1[more]
PLAS_CHLFU9.181e-2653.06Plastocyanin OS=Chlorella fusca GN=petE PE=1 SV=1[more]
PLAS_SCEOB2.500e-2348.96Plastocyanin, chloroplastic OS=Scenedesmus obliquu... [more]
PLAS_CYAP75.395e-1843.75Plastocyanin OS=Cyanothece sp. (strain PCC 7424) G... [more]
PLAS_SYNY32.960e-1644.33Plastocyanin OS=Synechocystis sp. (strain PCC 6803... [more]
PLAS_PHOLA3.866e-1639.39Plastocyanin OS=Phormidium laminosum GN=petE PE=1 ... [more]
PLAS_SYNP68.613e-1639.80Plastocyanin OS=Synechococcus sp. (strain ATCC 271... [more]
PLAS_SYNE78.613e-1639.80Plastocyanin OS=Synechococcus elongatus (strain PC... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06L05_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06L05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835114 ID=CF835114; Name=CF835114; organism=Citrus sinensis; type=EST; length=607bp
TTTTTTTTTTTTTTTTTAATGGAAAATACAGAGGTTTATTGGNTCCCCCT
TATAAGTCCCACCACATAACATTCTCTCTCACCAAATGCCCTTATGTATG
ATACTCATAAAATGCAAAAAGAAGAGAACGATAACCAATGAGATGAGGCA
AACAAAGTCTGAATGTGAACTTAATTAACAGTCACTTGTCCAACCATGCC
AGCTCCTTGGTGAGGGGAACAGTACAAAGAGTAAGTGCCTTTTTCAGTCA
GAGTAACAGCATAAGTCTCTCCAGGACCATTGAGAAGGTCTTCTGTAGAC
ATGGAGATTTTTGAAACATCAACACCACTCGGAATCTCATCTTCATCGAA
AACAACGTTGTGTGGGAACCCAGCATTGTTCTTGAACACAATCTTTTCAC
CGGAGCTGACAGAGAAAGAGCTTGGAACAAAAGCCAAGGACCCATCATCA
CCACCAAGCAAAACCTCAATGGCCATGGCATTGCTAGCAAGCATTGCGCT
GGCAGCTGTGGCCGCAACGGCCACTCCAACATCTTTGAGTGTGGCCTTGA
TGCTGAGCTTTGGGACAGCAGAGGCTGAGGCCTTCATGGTGGAACCAACA
ACTCTGG
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