CF835127
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835127 vs. ExPASy Swiss-Prot
Match: EXB15_ORYSJ (Expansin-B15 OS=Oryza sativa subsp. japonica GN=EXPB15 PE=3 SV=2) HSP 1 Score: 117.087 bits (292), Expect = 9.796e-26 Identity = 76/254 (29.92%), Postives = 128/254 (50.39%), Query Frame = 2 Query: 5 QMALYQYYLLSVMLLLPALCYS----HYTSTYSR--ATYYGSPDSLGTPTGACGF--GEYGRTVNDANVAGVSRLWKNGTGCGACYQVRCKVPQLCXXXXXXXXXXXXXXXXK-----TDFILSPRAYGRMALPDKSAELYSYGVVNVEFRRVPCWYKGYNLQFKVHENSRYPHYLAIAILYVAGQNDVLAVEIWQEDY-QEWVAMRRAFGAVFDISSPPEGAISLRFQVSGSAGLTWVVANNAIPSDWKAGVA 724 Q+ L + +++ + +LP C S S++S AT+YG+ + G+ GACG+ + + AG ++K+G GCG+CYQV+C C F LS A+G MA P ++ +L + GV+ +++ RVPC + G L F V S P+Y A+ + Y G D+ VE+ Q W M++++GAV+ +++ +++ S+G T +VA+N IPS WK G++ Sbjct: 6 QLILSTFVVIAAVTMLPRPCASIEFHRKLSSWSNGGATWYGAANGAGSDGGACGYQGAVFQAPFSSMIAAGSPSIYKSGLGCGSCYQVKCTGNSACSGNPVTVVLTDECPGGPCLSEPVHFDLSGTAFGAMANPGQADQLRAAGVLQIQYNRVPCNWGGVKLTFVVDVGSN-PNYFAVLVKYENGDGDLSGVELMQTGAGAAWTQMQQSWGAVWKLNAGSALQAPFSIRLTSSSGKT-LVASNVIPSGWKPGMS 257
BLAST of CF835127 vs. ExPASy Swiss-Prot
Match: EXPB7_ORYSJ (Expansin-B7 OS=Oryza sativa subsp. japonica GN=EXPB7 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.279e-25 Identity = 74/225 (32.89%), Postives = 116/225 (51.56%), Query Frame = 2 Query: 89 SRATYYGSPDSLGTPT--GACGFGEYGRTVNDANVA-GVSRLWKNGTGCGACYQVRCKVPQLCXXXXXXXXXXXXXXXXKT--DFILSPRAYGRMALPDKSAELYSYGVVNVEFRRVPCWYKGYNLQFKVHENSRYPHYLAIAILYVAGQNDVLAVEIWQEDYQE----------WVAMRRAFGAVF--DISSPPEGAISLRFQVSGSAGLTWVVANNAIPSDWK 712 +RAT+YG+P+ G GACGF A + G L+K+G GCG+CYQ+RC C + F LS A+G MA +++ EL G+++++FRRVPC Y G + F V + S P Y+AI + Y G DV+ V++ + Y W MR ++G+++ D + P +G SLR ++ +G T ++A+ IP+DW+ Sbjct: 95 ARATWYGAPNGAGPDDNGGACGFKNVNLPPFSAMTSCGNEPLFKDGKGCGSCYQIRCVGHPACSGLPETVIITDMNYYPVSLYHFDLSGTAFGAMAKDNRNDELRHAGIIDIQFRRVPCQYPGLTVTFHVEQGSN-PVYMAILVEYENGDGDVVQVDLMESRYSTGGVDGTPTGVWTPMRESWGSIWRLDTNHPLQGPFSLR--ITNESGKT-LIADQVIPADWQ 315
BLAST of CF835127 vs. ExPASy Swiss-Prot
Match: EXB18_ORYSJ (Expansin-B18 OS=Oryza sativa subsp. japonica GN=EXPB18 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.671e-25 Identity = 80/257 (31.13%), Postives = 127/257 (49.42%), Query Frame = 2 Query: 5 QMALYQYYLLSVMLLLPALCYS----HYTSTYSR--ATYYGSPDSLGTPTGACGFGEYGRTVNDAN-----VAGVSRLWKNGTGCGACYQVRCKVPQLCXXXXXXXXXXXXXXXXK-----TDFILSPRAYGRMALPDKSAELYSYGVVNVEFRRVPCWYKGYNLQFKVHENSRYPHYLAIAILYVAGQNDVLAVEIWQEDY-QEWVAMRRAFGAVFDISSPPEGAISLRFQVSGSAGLTWVVANNAIPSDWKAGVA 724 Q+ L + +++ LLP C S S++S AT+YG+ + G+ GACG Y V+ A AG ++K+G GCG+CYQV+C C F LS A+G MA P ++ +L + GV+ +++ RVPC + G L F V S P Y A+ + Y G D+ +++ Q W M++++GAV+ +S+ L +++ S+G T +VA+N IPS WK G + Sbjct: 6 QLILSTFVVIAAFTLLPRPCASIEFHRKLSSWSNGGATWYGAANGAGSDGGACG---YQAAVDQAPFSSMIAAGSPSIYKSGLGCGSCYQVKCSGNSACSGNPVTVVLTDECPGGPCLSEPVHFDLSGTAFGAMANPGQADQLRAAGVLQIQYNRVPCNWGGVMLTFAVDAGSN-PSYFAVLVKYENGDGDLSGMDLMQTGAGAAWTPMQQSWGAVWKLSAGAALQAPLSIRLTSSSGKT-LVASNVIPSGWKPGAS 257
BLAST of CF835127 vs. ExPASy Swiss-Prot
Match: EXPB3_ORYSJ (Expansin-B3 OS=Oryza sativa subsp. japonica GN=EXPB3 PE=2 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 6.350e-25 Identity = 65/212 (30.66%), Postives = 108/212 (50.94%), Query Frame = 2 Query: 89 SRATYYGSPDSLGTPT--GACGFGEYGR-TVNDANVAGVSRLWKNGTGCGACYQVRCKVPQLCXXXXXXXXXXXXXXXX--KTDFILSPRAYGRMALPDKSAELYSYGVVNVEFRRVPCWYKGYNLQFKVHENSRYPHYLAIAILYVAGQNDVLAVEIWQEDYQEWVAMRRAFGAVFDISSPPEGAISLRFQVSGSAGLTWVVANNAIPSDW 709 +RAT+YG+P G GACGF + + G ++K+G GCG+CYQ+RC C K F LS A+G MA P ++ +L G+++++F+RVPC + G + F V E S P Y A+ + Y G DV+ V++ + + Q W MR ++G+++ + S +++ +G +VA+ IP++W Sbjct: 45 ARATWYGAPTGAGPDDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRCVNHPACSGNPETVIITDMNYYPVSKYHFDLSGTAFGAMAKPGQNDQLRHAGIIDIQFKRVPCNFPGLKVTFHVEEGSN-PVYFAVLVEYEDGDGDVVQVDLMEANSQSWTPMRESWGSIWRLDSNHRLTAPFSLRITNESG-KQLVASQVIPANW 254
BLAST of CF835127 vs. ExPASy Swiss-Prot
Match: EXPB5_ORYSJ (Expansin-B5 OS=Oryza sativa subsp. japonica GN=EXPB5 PE=2 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 1.848e-24 Identity = 75/218 (34.40%), Postives = 110/218 (50.46%), Query Frame = 2 Query: 95 ATYYGSPDSLGTPTGACGFGEY--GRTVNDANVAGVSRLWKNGTGCGACYQVRCKVPQLC-----XXXXXXXXXXXXXXXXKTDFILSPRAYGRMALPDKSAELYSYGVVNVEFRRVPCWYKGYNLQFKVHENSRYPHYLAIAILYVAGQNDVLAVEIWQ-EDYQEWVAMRRAFGAVFDISSPPEGAISLRFQVSGSAGLTWV-VANNAIPSDWKAGV 721 AT+YG P G+ GACG+ R + AG L+KNG GCG+CYQ++C + C F +S A+G MA L S GV+ ++++RVPC + N+ FKV S P+YLAI + Y G D+ AV I + W AM++++GA + ++S +S F + ++G V VANN IPS W+AG+ Sbjct: 50 ATWYGGPQGDGSEGGACGYQSAVGQRPFSSMIAAGGPSLFKNGKGCGSCYQIKCTGNRACSGRPVTVVITDSCPGGVCLNEAAHFDMSGTAFGAMANRGMGDRLRSAGVLKIQYKRVPCRF-AMNVAFKVDAGSN-PYYLAILVQYANGDGDLAAVHIMEARGGGGWKAMQQSWGATWRLNSNTGKPLSPPFSIRLTSGSGKVLVANNVIPSGWQAGL 265
BLAST of CF835127 vs. ExPASy Swiss-Prot
Match: EXPB2_ARATH (Putative expansin-B2 OS=Arabidopsis thaliana GN=EXPB2 PE=2 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 3.151e-24 Identity = 72/220 (32.73%), Postives = 118/220 (53.64%), Query Frame = 2 Query: 95 ATYYGSPDSLGTPTGACGFGE------YGRTVNDANVAGVSRLWKNGTGCGACYQVRCKVPQLC---XXXXXXXXXXXXXXXXKTDFILSPRAYGRMALPDKSAELYSYGVVNVEFRRVPCWYKGYNLQFKVHENSRYPHYLAIAILYVAGQNDVLAVEIWQE-DYQEWVAMRRAFGAVF--DISSPPEGAISLRFQVSGSAGLTWVVANNAIPSDWKAG 718 +T+YG+P G+ GACG+G + + V+ AG L+K+G GCGACYQV+C C F LS A+G MA+ + ++L + G + + +++V C Y G + F+V + S + A+ + YV G ++ +E+ Q D +W++M +++GAV+ D+SSP +SLR S +G T VVA+N IP++W+ G Sbjct: 52 STWYGNPTGYGSDGGACGYGNAVAQPPFSKMVS----AGGPSLFKSGKGCGACYQVKCTSKSACSKNPVTVVITDECPGCVKESVHFDLSGTAFGAMAISGQDSQLRNVGELQILYKKVECNYIGKTVTFQVDKGSN-ANSFAVLVAYVNGDGEIGRIELKQALDSDKWLSMSQSWGAVWKLDVSSPLRAPLSLRV-TSLESGKT-VVASNVIPANWQPG 264
BLAST of CF835127 vs. ExPASy Swiss-Prot
Match: MPAC1_CYNDA (Major pollen allergen Cyn d 1 OS=Cynodon dactylon GN=CYND1 PE=1 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 7.021e-24 Identity = 76/230 (33.04%), Postives = 117/230 (50.87%), Query Frame = 2 Query: 77 TSTY------SRATYYGS------PDSLGTPTGACGFGEYGRTVNDANVA-GVSRLWKNGTGCGACYQVRCKVPQLCXXXXXXXXXXXXXXXXKT--DFILSPRAYGRMALPDKSAELYSYGVVNVEFRRVPCWY-KGYNLQFKVHENSRYPHYLAIAILYVAGQNDVLAVEIWQEDYQEWVAMRRAFGAVF--DISSPPEGAISLRFQVSGSAGLTWVVANNAIPSDWK 712 T+TY +RAT+YGS PD G GACG+ + + D A G ++K+G GC ACY+++CK P C F LS +A+G MA + +L G + ++FRRV C Y G + F + + S HYLA+ + Y AG +++AV+I D E++ M+ ++GA++ D P +G S+R G A L V ++ IP++WK Sbjct: 11 TATYGSKWLEARATFYGSNPRGAAPDDHG---GACGYKDVDKPPFDGMTACGNEPIFKDGLGCRACYEIKCKEPVECSGEPVLVKITDKNYEHIAAYHFDLSGKAFGAMAKKGQEDKLRKAGELTLQFRRVKCKYPSGTKITFHIEKGSN-DHYLALLVKYAAGDGNIVAVDIKPRDSDEFIPMKSSWGAIWRIDPKKPLKGPFSIRLTSEGGAHL---VQDDVIPANWK 233
BLAST of CF835127 vs. ExPASy Swiss-Prot
Match: MPAP1_PHLPR (Pollen allergen Phl p 1 OS=Phleum pratense GN=PHLPI PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 9.169e-24 Identity = 69/227 (30.40%), Postives = 117/227 (51.54%), Query Frame = 2 Query: 77 TSTY------SRATYYGSPDSLGTPT--GACGFGEYGRT-VNDANVAGVSRLWKNGTGCGACYQVRCKVPQLCXXXXXXXXXXXXXXXXKTD--FILSPRAYGRMALPDKSAELYSYGVVNVEFRRVPCWY-KGYNLQFKVHENSRYPHYLAIAILYVAGQNDVLAVEIWQEDYQEWVAMRRAFGAVFDISSPPE--GAISLRFQVSGSAGLTWVVANNAIPSDWKA 715 T+TY +++T+YG P G GACG+ + + + G + ++K+G GCG+C++++C P+ C F LS A+G MA +L S G + ++FRRV C Y +G + F V + S P+YLA+ + YV G DV+AV+I ++ +W+ ++ ++GA++ I +P + G ++R+ G T A + IP WKA Sbjct: 34 TATYGDKWLDAKSTWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKSGRGCGSCFEIKCTKPEACSGEPVVVHITDDNEEPIAPYHFDLSGHAFGAMAKKGDEQKLRSAGELELQFRRVKCKYPEGTKVTFHVEKGSN-PNYLALLVKYVNGDGDVVAVDIKEKGKDKWIELKESWGAIWRIDTPDKLTGPFTVRYTTEGG---TKTEAEDVIPEGWKA 256
BLAST of CF835127 vs. ExPASy Swiss-Prot
Match: EXPB3_ARATH (Expansin-B3 OS=Arabidopsis thaliana GN=EXPB3 PE=2 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 9.169e-24 Identity = 81/255 (31.76%), Postives = 130/255 (50.98%), Query Frame = 2 Query: 8 MALYQYYLLSVMLLLPALCYSHYTSTYSR-----------ATYYGSPDSLGTPTGACGFGEYGRTVND-----ANVAGVSR-LWKNGTGCGACYQVRCKVPQLCXXXXXXXXXXXXXXXXK---TDFILSPRAYGRMALPDKSAELYSYGVVNVEFRRVPCWYKGYNLQFKVHENSRYPHYLAIAILYVAGQNDVLAVEIWQEDYQEWVAMRRAFGAVF-DISSPPEGAISLRFQVSGSAGLTWVVANNAIPSDW 709 M L+ L ++ ++L L S +T +R AT+YGSP+ G+ GACG+G T+ D A V V+ L+KNG GCGACY+VRC +C T F LS +GR+A+ +S L + G++ V +RR C Y+G N+ F V+E S +L++ + + G+ D+ ++ I Q +EW+ M+ +GA + I P +G S++ + SAG T + A + +P +W Sbjct: 1 MQLFPVMLATLCIVLQLLIGSSALATTNRHVSNSHWLPAVATWYGSPNGDGSDGGACGYG----TLVDVKPLHARVGAVNPILFKNGEGCGACYKVRCLDKSICSRRAVTVIITDECPGCSKTSTHFDLSGAVFGRLAIAGESGPLRNRGLIPVIYRRTACKYRGKNIAFHVNEGST-DFWLSLLVEFEDGEGDIGSMHIRQAGAREWLEMKHVWGANWCIIGGPLKGPFSIKL-TTLSAGKT-LSATDVVPRNW 248
BLAST of CF835127 vs. ExPASy Swiss-Prot
Match: EXB11_ORYSJ (Expansin-B11 OS=Oryza sativa subsp. japonica GN=EXPB11 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 9.169e-24 Identity = 71/218 (32.57%), Postives = 109/218 (50.00%), Query Frame = 2 Query: 95 ATYYGSPDSLGTPTGACGFGEY--GRTVNDANVAGVSRLWKNGTGCGACYQVRCKVPQLCXXXXXXXXXXXXXXXX-----KTDFILSPRAYGRMALPDKSAELYSYGVVNVEFRRVPCWYKGYNLQFKVHENSRYPHYLAIAILYVAGQNDVLAVEIWQEDYQEWVAMRRAFGAVFDISSPPEGAISLRF--QVSGSAGLTWVVANNAIPSDWKAGV 721 ATYYG+P+ G+ GACG+ R + AG L+K G GCGACY+V+C C F +S + G MA P + +L + G++ V++RRVPC Y G N+ F+V + + P Y + I + G D+ AV++ E W M + +GA++ +S A+ F +++ +G +VANN IP+ WK GV Sbjct: 69 ATYYGAPNGDGSDGGACGYQTAVGQRPFSSMIAAGSPSLYKGGKGCGACYEVKCTTNAACSGQPATVVITDECPGGICLAGAAHFDMSGTSMGAMAKPGMADKLRAAGILQVQYRRVPCKYSGVNIAFRVDQGAN-PFYFEVLIEFEDGDGDLNAVDL-MEAGCGWTPMVQNWGALWRYNSNTGKALKAPFSLRLTSDSGKV-LVANNVIPASWKPGV 283 The following BLAST results are available for this feature:
BLAST of CF835127 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 74
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835127 ID=CF835127; Name=CF835127; organism=Citrus sinensis; type=EST; length=725bpback to top |