CF835140

Overview
NameCF835140
Unique NameCF835140
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length765
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME22_ARATH (Putative pectinesterase/pectinesterase inhibitor 22 OS=Arabidopsis thaliana GN=PME22 PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 8.618e-23
Identity = 55/133 (41.35%), Postives = 82/133 (61.65%), Query Frame = 1
Query:  367 LVNQSVIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFEG 765
            +++ + +V+  G   + TI +AI  +PN+S      +                K K N++L+GDGI +T+ITG+ + + G TTF ++T AVSG  F+A D+TF+NTAGP   QAVALR ++D S+FYRCS EG
Sbjct:  236 VMHPNTVVAIDGKGKYRTINEAINEAPNHSTKR---YVIYVKKGVYKENIDLKKKKTNIMLVGDGIGQTIITGDRNFMQGLTTFRTATVAVSGRGFIAKDITFRNTAGPQNRQAVALRVDSDQSAFYRCSVEG 365          
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME46_ARATH (Probable pectinesterase/pectinesterase inhibitor 46 OS=Arabidopsis thaliana GN=PME46 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.470e-22
Identity = 83/255 (32.55%), Postives = 128/255 (50.20%), Query Frame = 1
Query:   16 MNSWTESRPLLSGIVTNQQTCFDELVDS-KSGIAAVLYEPLSNVTRLYSVSLGLVTHALDRNLXXXXXXXXXXXXWFLK--NTNRFREP--LETLIKDIRKAPCHDCHKGERNLGEVESNGILVNQSVIVSPHGTDNFTTIGDAIA-FSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFE 762
            + ++ + R  LS + T Q+TC D LV++ K  +       L N T + S +L ++T                   W  K  +T +FR    LET    +  A      +G R L   ES  +    +++V+  G+  + TIG+A+A     N KP   Y                 K K N++++GDG ++T+++   + IDG  TF ++TFAV G+ F+A D+ F NTAGPAKHQAVAL  +ADLS FY+C+ +
Sbjct:  154 LKNFDDLRTWLSSVGTYQETCMDALVEANKPSLTTFGENHLKNSTEMTSNALAIIT-------------------WLGKIADTVKFRRRRLLETGNAKVVVADL-PMMEGRRLL---ESGDLKKKATIVVAKDGSGKYRTIGEALAEVEEKNEKPTIIYVKKGVYLENVRVE----KTKWNVVMVGDGQSKTIVSAGLNFIDGTPTFETATFAVFGKGFMARDMGFINTAGPAKHQAVALMVSADLSVFYKCTMD 381          
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME21_SOLLC (Pectinesterase 2.1 OS=Solanum lycopersicum GN=PME2.1 PE=2 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 1.920e-22
Identity = 77/240 (32.08%), Postives = 115/240 (47.92%), Query Frame = 1
Query:   46 LSGIVTNQQTCFDELVD-SKSGIAAVLYEPLSNVTRLYSVSLGLVTHALDRNLXXXXXXXXXXXXWFLKNTNRFREPLETLIKDIRKAPCHDCHKGERNLGEVESNGILVNQSVIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFE 762
            LSG++TN  TC DEL   +K+ I     + L +  ++    L  VT   D                            E L   + K P     + +R L  +ES+G  +  + +V+  GT  + T+ +A+A +P+ SK     +                  K NL++IGDG+  T+ITG+ +V+DG TTF+S+T A  G+ F+  D+  +NTAGPAKHQAVALR  AD S   RC  +
Sbjct:  156 LSGVLTNHVTCLDELDSFTKAMINGTNLDELISRAKVALAMLASVTTPND----------------------------EVLRPGLGKMPSWVSSR-DRKL--MESSGKDIGANAVVAKDGTGKYRTLAEAVAAAPDKSKTR---YVIYVKRGTYKENVEVSSRKMNLMIIGDGMYATIITGSLNVVDGSTTFHSATLAAVGKGFILQDICIQNTAGPAKHQAVALRVGADKSVINRCRID 361          
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME22_SOLLC (Pectinesterase 2.2 OS=Solanum lycopersicum GN=PME2.2 PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.275e-22
Identity = 75/240 (31.25%), Postives = 115/240 (47.92%), Query Frame = 1
Query:   46 LSGIVTNQQTCFDELVD-SKSGIAAVLYEPLSNVTRLYSVSLGLVTHALDRNLXXXXXXXXXXXXWFLKNTNRFREPLETLIKDIRKAPCHDCHKGERNLGEVESNGILVNQSVIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFE 762
            LSG++TN  TC DEL   +K+ I     + L +  ++    L  VT   D                            + L   + K P     + +R L  +ES+G  +  + +V+  GT  + T+ +A+A +P+ SK     +                  K  L+++GDG++ T+ITGN +V+DG TTF+S+T A  G+ F+  D+  +NTAGPAKHQAVALR  AD S   RC  +
Sbjct:  156 LSGVLTNHVTCLDELDSFTKAMINGTNLDELISRAKVALAMLASVTTPND----------------------------DVLRPGLGKMPSWVSSR-DRKL--MESSGKDIGANAVVAKDGTGKYRTLAEAVAAAPDKSKTR---YVIYVKRGIYKENVEVSSRKMKLMIVGDGMHATIITGNLNVVDGSTTFHSATLAAVGKGFILQDICIQNTAGPAKHQAVALRVGADKSVINRCRID 361          
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME2_CITSI (Pectinesterase 2 OS=Citrus sinensis GN=PECS-2.1 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 7.295e-22
Identity = 56/129 (43.41%), Postives = 77/129 (59.69%), Query Frame = 1
Query:  379 SVIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFEG 765
            +++V+  G+ N  TI +A+A     +    G                     KN++ +GDGI +T+ITG+ SV  G TTF S+T AV G+ F+A D+T +NTAGP  HQAVALR+ +DLS FYRCSFEG
Sbjct:  202 NIVVAQDGSGNVKTIQEAVA-----AASRAGGSRYVIYIKAGTYNENIEVKLKNIMFVGDGIGKTIITGSKSVGGGATTFKSATVAVVGDNFIARDITIRNTAGPNNHQAVALRSGSDLSVFYRCSFEG 325          
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME1_FICAW (Pectinesterase/pectinesterase inhibitor OS=Ficus awkeotsang PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.123e-21
Identity = 71/240 (29.58%), Postives = 108/240 (45.00%), Query Frame = 1
Query:   46 LSGIVTNQQTCFDELVDSKSGIAAVLYEP-LSNVTRLYSVSLGLVTHALDRNLXXXXXXXXXXXXWFLKNTNRFREPLETLIKDIRKAPCHDCHKGERNLGEVESNGILVNQSVIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFE 762
            LSG++TN  TC D L +  +     L E  L+ +      SL +                     W      R    L+TL KDI                            ++V+  G+ ++ T+ +A+A  P+NSK                        KKN++L+G+G++ T+ITG+ +V+DG TTF+S+T A  G+ F+A D+ F+NTAGP K+QAVALR  AD +   RC  +
Sbjct:  148 LSGVLTNHVTCLDGLEEGSTDYIKTLMESHLNELILRARTSLAIFVTLFPAKSNVIEPVTGNFPTWVTAGDRRL---LQTLGKDI-------------------------EPDIVVAKDGSGDYETLNEAVAAIPDNSKKR---VIVLVRTGIYEENVDFGYQKKNVMLVGEGMDYTIITGSRNVVDGSTTFDSATVAAVGDGFIAQDICFQNTAGPEKYQAVALRIGADETVINRCRID 356          
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME59_ARATH (Probable pectinesterase/pectinesterase inhibitor 59 OS=Arabidopsis thaliana GN=PME59 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.621e-21
Identity = 53/132 (40.15%), Postives = 79/132 (59.85%), Query Frame = 1
Query:  370 VNQSVIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFEG 765
            V  +++V+  G+ +F T+  AI  +    K   G F                 +  +++L+GDG+  T+ITG  SV  G+TT+NS+T  + G  F+A  +TF+NTAGPAK QAVALR+++DLS FY+CS EG
Sbjct:  218 VRANLVVAKDGSGHFNTVQAAIDVA-GRRKVTSGRFVIYVKRGIYQENINVRLNNDDIMLVGDGMRSTIITGGRSVQGGYTTYNSATAGIEGLHFIAKGITFRNTAGPAKGQAVALRSSSDLSIFYKCSIEG 348          
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME60_ARATH (Probable pectinesterase/pectinesterase inhibitor 60 OS=Arabidopsis thaliana GN=PME60 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.729e-21
Identity = 57/145 (39.31%), Postives = 85/145 (58.62%), Query Frame = 1
Query:  331 ERNLGEVESNGILVNQSVIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFEG 765
            ER L +++S    V  +++V+  G+ +F T+  AI  +    K   G F                 +  N++L+GDG+  T+ITG  SV  G+TT++S+T  + G  F+A  + F+NTAGPAK QAVALR+++DLS FYRCS EG
Sbjct:  213 ERRLLQLQS----VRANLVVAKDGSGHFKTVQAAIDVA-GRRKVTSGRFVIYVKRGIYQENLNVRLNNDNIMLVGDGMRYTIITGGRSVKGGYTTYSSATAGIEGLHFIAKGIAFQNTAGPAKGQAVALRSSSDLSIFYRCSIEG 352          
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PMEU1_SOLLC (Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum GN=PMEU1 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.176e-21
Identity = 70/243 (28.81%), Postives = 120/243 (49.38%), Query Frame = 1
Query:   37 RPLLSGIVTNQQTCFDELVDSKSG--IAAVLYEPLSNVTRLYSVSLGLVTHALDRNLXXXXXXXXXXXXWFLKNTNRFREPLET--LIKDIRKAPCHDCHKGERNLGEVESNGILVNQSVIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRC 753
            + L+S  +TNQ+TC D     ++   +  VL +   +V ++ S +L ++ +  D ++                N  +   P     L++D  + P      G+R L +  +    V   V+V+  G+ ++ T+ +A+  +P  S      +               PK K N++ +GDG + T+IT + +V DG TTF+S+T      + +A D+TF+NTAG +KHQAVAL   +DLS+FYRC
Sbjct:  174 KTLISSAITNQETCLDGFSHDEADKKVRKVLLKGQKHVEKMCSNALAMICNMTDTDIA---------------NEMKLSAPANNRKLVEDNGEWP-EWLSAGDRRLLQSST----VTPDVVVAADGSGDYKTVSEAVRKAPEKSSKR---YVIRIKAGVYRENVDVPKKKTNIMFMGDGKSNTIITASRNVQDGSTTFHSATVVRVAGKVLARDITFQNTAGASKHQAVALCVGSDLSAFYRC 393          
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME3_SOLLC (Pectinesterase 3 OS=Solanum lycopersicum GN=PME3 PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.376e-20
Identity = 74/240 (30.83%), Postives = 113/240 (47.08%), Query Frame = 1
Query:   46 LSGIVTNQQTCFDELVD-SKSGIAAVLYEPLSNVTRLYSVSLGLVTHALDRNLXXXXXXXXXXXXWFLKNTNRFREPLETLIKDIRKAPCHDCHKGERNLGEVESNGILVNQSVIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFE 762
            LSG++TN  TC DEL   S S     + + L    ++    L  VT   D                            E L + + K P +     +R L E     I+ N+  +V+  GT ++ T+ +A+A +P+ +K     +                K K NL+++GDG+N T+ITG+ +V+DG +TF S+T A  G+ F+  D+  +NTAGP K QAVALR  AD+S   RC  +
Sbjct:  151 LSGVLTNHVTCLDELTSFSLSTKNGTVLDELITRAKVALAMLASVTTPND----------------------------EVLRQGLGKMP-YWVSSRDRKLMESSGKDIIANR--VVAQDGTGDYQTLAEAVAAAPDKNKTR---YVIYVKMGIYKENVVVTKKKMNLMIVGDGMNATIITGSLNVVDG-STFPSNTLAAVGQGFILQDICIQNTAGPEKDQAVALRVGADMSVINRCRID 355          
The following BLAST results are available for this feature:
BLAST of CF835140 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
PME22_ARATH8.618e-2341.35Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME46_ARATH1.470e-2232.55Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME21_SOLLC1.920e-2232.08Pectinesterase 2.1 OS=Solanum lycopersicum GN=PME2... [more]
PME22_SOLLC3.275e-2231.25Pectinesterase 2.2 OS=Solanum lycopersicum GN=PME2... [more]
PME2_CITSI7.295e-2243.41Pectinesterase 2 OS=Citrus sinensis GN=PECS-2.1 PE... [more]
PME1_FICAW2.123e-2129.58Pectinesterase/pectinesterase inhibitor OS=Ficus a... [more]
PME59_ARATH3.621e-2140.15Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME60_ARATH4.729e-2139.31Probable pectinesterase/pectinesterase inhibitor 6... [more]
PMEU1_SOLLC6.176e-2128.81Pectinesterase/pectinesterase inhibitor U1 OS=Sola... [more]
PME3_SOLLC1.376e-2030.83Pectinesterase 3 OS=Solanum lycopersicum GN=PME3 P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06L22_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06L22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835140 ID=CF835140; Name=CF835140; organism=Citrus sinensis; type=EST; length=765bp
CTGAGTCGATGACGGATGAATTCGTGGACAGAGTCACGACCTCTGCTGAG
TGGGATCGTCACGAATCAGCAGACTTGCTTTGACGAGCTTGTGGATTCGA
AGAGCGGCATTGCTGCTGTGCTGTATGAGCCGCTGTCGAATGTGACTCGT
TTGTACAGTGTTTCGCTTGGGCTCGTGACCCACGCACTGGACCGGAATTT
GAGGCGGAATAAGAAGCGAAGCAAACGGTCCAAGAATTGGTTTTTGAAGA
ACACGAACCGGTTTCGTGAACCGCTCGAGACTCTTATCAAGGATATAAGA
AAGGCACCTTGCCATGATTGCCACAAAGGAGAAAGAAATCTTGGTGAAGT
GGAGAGCAATGGAATTCTTGTAAACCAAAGTGTGATAGTGAGCCCACATG
GGACTGATAATTTCACAACAATCGGGGATGCCATTGCATTTTCTCCCAAT
AACTCCAAGCCCGAAGATGGGTATTTTGTTATCTATGCACGAGAAGCTGT
TTACGAAGAATACGTGGTTGTTCCTAAGCATAAGAAGAATCTCTTGCTCA
TTGGTGATGGCATCAATCGGACTGTCATTACTGGAAATCACAGTGTCATT
GATGGCTGGACTACTTTCAATTCTTCAACTTTCGCTGTTTCTGGTGAGAG
ATTTGTAGCGGTAGATGTTACATTTAAGAACACAGCTGGTCCTGCAAAGC
ACCAAGCAGTAGCTCTGAGGAACAATGCTGATCTCTCATCATTCTACCGT
TGCAGTTTTGAAGGC
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