CF835140

Overview
NameCF835140
Unique NameCF835140
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length765
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME3_PHAVU (Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.065e-20
Identity = 74/244 (30.33%), Postives = 113/244 (46.31%), Query Frame = 1
Query:   46 LSGIVTNQQTCFDELVDSKS----GIAAVLYEPLSNVTRLYSVSLGLVTHALDRNLXXXXXXXXXXXXWFLKNTNRFREPLETLIKDIRKAPCHDCHKGERNLGEVESNGILVNQSVIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFEG 765
            LS  +T+Q TC D + +  S    G    +   + N T   S SL +VT  L                      +RF  P+    + +   P       ER L E ++N        +V+  G+  F TIG+A+      S+     F                K+  N+++ GDG ++T + G+ + +DG  TF ++TFAV G+ F+A D+ F N AG +KHQAVALR+ +D S F+RCSF+G
Sbjct:  182 LSAALTDQDTCLDAVGELNSTAARGALQEIETAMRNSTEFASNSLAIVTKILGL-------------------LSRFETPIHH--RRLLGFP-EWLGAAERRLLEEKNNDS--TPDAVVAKDGSGQFKTIGEALKLVKKKSEER---FSVYVKEGRYVENIDLDKNTWNVMIYGDGKDKTFVVGSRNFMDGTPTFETATFAVKGKGFIAKDIGFVNNAGASKHQAVALRSGSDRSVFFRCSFDG 398          
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME1_SOLLC (Pectinesterase 1 OS=Solanum lycopersicum GN=PME1.9 PE=1 SV=5)

HSP 1 Score: 98.9821 bits (245), Expect = 3.065e-20
Identity = 52/138 (37.68%), Postives = 81/138 (58.70%), Query Frame = 1
Query:  349 VESNGILVNQSVIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFE 762
            +ES+G  +  + +V+  GT ++ T+ +A+A +P+ SK     +                 +K NL+++GDG+  T ITG+ +V+DG TTF S+T A  G+ F+  D+  +NTAGPAK QAVALR  AD+S   RC  +
Sbjct:  223 MESSGKDIIANAVVAQDGTGDYQTLAEAVAAAPDKSKTR---YVIYVKRGTYKENVEVASNKMNLMIVGDGMYATTITGSLNVVDGSTTFRSATLAAVGQGFILQDICIQNTAGPAKDQAVALRVGADMSVINRCRID 357          
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME38_ARATH (Putative pectinesterase/pectinesterase inhibitor 38 OS=Arabidopsis thaliana GN=PME38 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.003e-20
Identity = 51/128 (39.84%), Postives = 75/128 (58.59%), Query Frame = 1
Query:  382 VIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFEG 765
            V+V+  G+ ++ TI +A+  +    K    Y                 K   N+++ GDGI +T+ITG+ S   G++T+ S+TF   G+ FV  D+T +NTAGP  HQAVALR+N+D+S FYRCS EG
Sbjct:  165 VVVAQDGSGDYKTIQEAVNGAGERLKGSPRYVIHVKQGVYEEYVNVGIK-SNNIMITGDGIGKTIITGDKSKGRGFSTYKSATFVAEGDGFVGRDITIRNTAGPENHQAVALRSNSDMSVFYRCSIEG 291          
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME17_ARATH (Probable pectinesterase/pectinesterase inhibitor 17 OS=Arabidopsis thaliana GN=PME17 PE=2 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 6.828e-20
Identity = 56/128 (43.75%), Postives = 77/128 (60.16%), Query Frame = 1
Query:  379 SVIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFE 762
            + +V+  G+ NF TI +AI     ++    G F                  KKN++L GDGI +T+ITG+ SV  G TTFNS+T A  G+ F+A  +TF+NTAG +  QAVALR+ +DLS FY+CSFE
Sbjct:  206 NAVVAKDGSGNFKTIKEAI-----DAASGSGRFVIYVKQGVYSENLEI--RKKNVMLRGDGIGKTIITGSKSVGGGTTTFNSATVAAVGDGFIARGITFRNTAGASNEQAVALRSGSDLSVFYQCSFE 326          
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME61_ARATH (Probable pectinesterase/pectinesterase inhibitor 61 OS=Arabidopsis thaliana GN=PME61 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.521e-19
Identity = 53/132 (40.15%), Postives = 73/132 (55.30%), Query Frame = 1
Query:  370 VNQSVIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFEG 765
            +   + VS  G+  F TI +AI  +P +S     +                 + K NL+ IGDG  +TVITG  S+ D  TTF+++TFA +G  F+  D+TF+N AGPAKHQAVALR   D +  YRC+  G
Sbjct:  270 IQADITVSKDGSGTFKTIAEAIKKAPEHSSRR--FVIYVKAGRYEEENLKVGRKKTNLMFIGDGKGKTVITGGKSIADDLTTFHTATFAATGAGFIVRDMTFENYAGPAKHQAVALRVGGDHAVVYRCNIIG 399          
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME34_ARATH (Probable pectinesterase/pectinesterase inhibitor 34 OS=Arabidopsis thaliana GN=PME34 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.521e-19
Identity = 72/243 (29.63%), Postives = 108/243 (44.44%), Query Frame = 1
Query:   46 LSGIVTNQQTC---FDELVDSKSGIAAVLYEPLSNVTRLYSVSLGLVTHALDRNLXXXXXXXXXXXXWFLKNTNRFREPLETLIKDIRKAPCHDCHKGERNLGEVESNGILVNQSVIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFEG 765
            LS  +TN  TC   FD + D   G+   +   L N++ L S  L + + + D +                +   +F   +    ++I + P                    +   +IVS  G     TI +AI  +P NS                       + K NL+ +GDG  +TVI+G  S+ D  TTF++++FA +G  F+A D+TF+N AGPAKHQAVALR  AD +  YRC+  G
Sbjct:  189 LSAALTNHDTCTEGFDGVDDG--GVKDHMTAALQNLSELVSNCLAIFSASHDGDDFAGVPIQNRRLLGVEEREEKFPRWMRPKEREILEMPVSQ-----------------IQADIIVSKDGNGTCKTISEAIKKAPQNSTRR--IIIYVKAGRYEENNLKVGRKKINLMFVGDGKGKTVISGGKSIFDNITTFHTASFAATGAGFIARDITFENWAGPAKHQAVALRIGADHAVIYRCNIIG 410          
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME42_ARATH (Probable pectinesterase/pectinesterase inhibitor 42 OS=Arabidopsis thaliana GN=PME42 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.389e-19
Identity = 76/251 (30.28%), Postives = 116/251 (46.22%), Query Frame = 1
Query:   16 MNSWTESRPLLSGIVTNQQTCFDELVDSKSGIAAVLYEP-LSNVTRLYSVSLGLVTHALDRNLXXXXXXXXXXXXWFLKNTNRFREPLETLIKDIRKAPCHDCHKGERNLGEVESNGILVNQSVIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFEG 765
            + S+      LSG++T+  TC DE+ D   G      EP L ++     V+L L                      F+  + R    L +++ +   +P    H  +++L  + +  +     V+V+  GT  + T+  AIA +P +S      F                  K NL LIGDG + T+ITGN S  +   TF ++TFA +G+ F+ VD+ F+NT GPAK  AVALR + D+S  YRC  EG
Sbjct:  122 LGSYENIHTWLSGVLTSYITCIDEIGD---GAYKRRVEPQLQDLISKAKVALAL----------------------FISISPRDNTELNSVVPN---SPSWLSHVDKKDL-YLNAEALKKIADVVVAKDGTGKYNTVNAAIAAAPQHSHKR---FIIYIKTGIYDEIVAIENTKPNLTLIGDGQDSTIITGNLSASNVRRTFYTATFASNGKGFIGVDMCFRNTVGPAKGPAVALRVSGDMSVIYRCRVEG 340          
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME26_ARATH (Putative pectinesterase/pectinesterase inhibitor 26 OS=Arabidopsis thaliana GN=PME26 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.389e-19
Identity = 74/242 (30.58%), Postives = 111/242 (45.87%), Query Frame = 1
Query:   46 LSGIVTNQQTCFDELVDSK--SGIAAVLYEPLSNVTRLYSVSLGLVTHALDRNLXXXXXXXXXXXXWFLKNTNRFREPLETLIKDIRKAPCHDCHKGERNLGEVESNGILVNQSVIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFEG 765
            LS  VT+  TC D L +    S I   L   + N T   S SL +V   L +                L N+N F   +   ++ + +A         +NL             V V+  G+ +  T+ +A+   P   K     F                K K N+ + GDG ++T+I+G+ +++DG  TFN+STFA  G+ F+  D+   NTAGP KHQAVA R+++D S +YRCSF+G
Sbjct:  570 LSSAVTDIGTCGDTLDEDNYNSPIPQKLKSAMVNSTEFTSNSLAIVAQVLKKPSKSRIPVQGRR----LLNSNSFPNWVRPGVRRLLQA---------KNL----------TPHVTVAADGSGDVRTVNEAVWRVPKKGKT---MFVIYVKAGTYVENVLMKKDKWNVFIYGDGRDKTIISGSTNMVDGVRTFNTSTFATEGKGFMMKDMGIINTAGPEKHQAVAFRSDSDRSVYYRCSFDG 785          
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME16_ARATH (Probable pectinesterase/pectinesterase inhibitor 16 OS=Arabidopsis thaliana GN=PME16 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.781e-19
Identity = 53/132 (40.15%), Postives = 72/132 (54.55%), Query Frame = 1
Query:  370 VNQSVIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFEG 765
            +N   +V+P G+    TIG+A+  +   S    G                 P  +KN++L+GDG  +TVI G+ S   GWTT+ ++T A  GE F+A D+TF N AGP   QAVALR  AD S  +RCS EG
Sbjct:  210 LNVDAVVAPDGSGTHKTIGEALLSTSLASS--GGRTKIYLKAGTYHENINIPTKQKNVMLVGDGKGKTVIVGSRSNRGGWTTYKTATVAAMGEGFIARDMTFVNNAGPKSEQAVALRVGADKSVVHRCSVEG 339          
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME_MEDSA (Pectinesterase/pectinesterase inhibitor OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.288e-18
Identity = 72/243 (29.63%), Postives = 112/243 (46.09%), Query Frame = 1
Query:   46 LSGIVTNQQTCFDELVDSKSGIAAVLYEPLSNVTRLYSVSLGLVTHALDRNLXXXXXXXXXXXXWFLK--NTNRFREPLETLIKDIRKAPCHDCHKGERNLGEVESNGILVNQSVIVSPHGTDNFTTIGDAI-AFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFEG 765
            L+G +++QQTC D       G A    +    +T++   S+ L ++A+D                 LK  +T+++      L  D   +  +D H+     G V+ N +       V+  G+  F T+ DA+    P N+ P    F                K    + +IGDG  +T  TG+ +  DG  T+N++TF V+G  F+A D+ F+NTAG  KHQAVALR  AD + FY C  +G
Sbjct:   41 LTGTLSHQQTCLD-------GFANTTTKAGETMTKVLKTSMELSSNAIDM---------MDAVSRILKGFDTSQYSVSRRLLSDDGIPSWVNDGHRRLLAGGNVQPNAV-------VAQDGSGQFKTLTDALKTVPPKNAVP----FVIHVKAGVYKETVNVAKEMNYVTVIGDGPTKTKFTGSLNYADGINTYNTATFGVNGANFMAKDIGFENTAGTGKHQAVALRVTADQAIFYNCQMDG 256          
The following BLAST results are available for this feature:
BLAST of CF835140 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
PME3_PHAVU3.065e-2030.33Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=... [more]
PME1_SOLLC3.065e-2037.68Pectinesterase 1 OS=Solanum lycopersicum GN=PME1.9... [more]
PME38_ARATH4.003e-2039.84Putative pectinesterase/pectinesterase inhibitor 3... [more]
PME17_ARATH6.828e-2043.75Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME61_ARATH1.521e-1940.15Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME34_ARATH1.521e-1929.63Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME42_ARATH3.389e-1930.28Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME26_ARATH3.389e-1930.58Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME16_ARATH5.781e-1940.15Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME_MEDSA1.288e-1829.63Pectinesterase/pectinesterase inhibitor OS=Medicag... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06L22_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06L22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835140 ID=CF835140; Name=CF835140; organism=Citrus sinensis; type=EST; length=765bp
CTGAGTCGATGACGGATGAATTCGTGGACAGAGTCACGACCTCTGCTGAG
TGGGATCGTCACGAATCAGCAGACTTGCTTTGACGAGCTTGTGGATTCGA
AGAGCGGCATTGCTGCTGTGCTGTATGAGCCGCTGTCGAATGTGACTCGT
TTGTACAGTGTTTCGCTTGGGCTCGTGACCCACGCACTGGACCGGAATTT
GAGGCGGAATAAGAAGCGAAGCAAACGGTCCAAGAATTGGTTTTTGAAGA
ACACGAACCGGTTTCGTGAACCGCTCGAGACTCTTATCAAGGATATAAGA
AAGGCACCTTGCCATGATTGCCACAAAGGAGAAAGAAATCTTGGTGAAGT
GGAGAGCAATGGAATTCTTGTAAACCAAAGTGTGATAGTGAGCCCACATG
GGACTGATAATTTCACAACAATCGGGGATGCCATTGCATTTTCTCCCAAT
AACTCCAAGCCCGAAGATGGGTATTTTGTTATCTATGCACGAGAAGCTGT
TTACGAAGAATACGTGGTTGTTCCTAAGCATAAGAAGAATCTCTTGCTCA
TTGGTGATGGCATCAATCGGACTGTCATTACTGGAAATCACAGTGTCATT
GATGGCTGGACTACTTTCAATTCTTCAACTTTCGCTGTTTCTGGTGAGAG
ATTTGTAGCGGTAGATGTTACATTTAAGAACACAGCTGGTCCTGCAAAGC
ACCAAGCAGTAGCTCTGAGGAACAATGCTGATCTCTCATCATTCTACCGT
TGCAGTTTTGAAGGC
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