CF835140

Overview
NameCF835140
Unique NameCF835140
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length765
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME30_ARATH (Probable pectinesterase 30 OS=Arabidopsis thaliana GN=PME30 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.288e-18
Identity = 53/128 (41.41%), Postives = 73/128 (57.03%), Query Frame = 1
Query:  382 VIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFEG 765
            V+V+  GT  ++T+  AIA +P +S+     F                  K NL LIGDG + T+ITGN S  +   T+N++T A +G  F+ VD+ F+NTAGPAK  AVALR + D+S  YRC  EG
Sbjct:  189 VVVAKDGTGKYSTVNAAIAAAPQHSQKR---FVIYIKTGIYDEIVVIENTKPNLTLIGDGQDLTIITGNLSASNVRRTYNTATVASNGNGFIGVDMCFRNTAGPAKGPAVALRVSGDMSVIYRCRVEG 313          
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME28_ARATH (Putative pectinesterase/pectinesterase inhibitor 28 OS=Arabidopsis thaliana GN=PME28 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.288e-18
Identity = 65/240 (27.08%), Postives = 108/240 (45.00%), Query Frame = 1
Query:   46 LSGIVTNQQTCFDELVDSKSGIAAVLYEPLSNVTRLYSVSLGLVTHALDRNLXXXXXXXXXXXXWFLKNTNRFREPLETLIKDIRKAPCHDCHKGERNLGEVESNGILVNQSVIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFEG 765
            LS  ++++QTC D    ++      + + L    +L    L +VT     N               L  +  F   ++   + +  AP  +                 V   ++V+  G+  + TI +A+ F P   K ++  F                +   +L+ IGDG ++TVI+G+ S  DG TT+ ++T A+ G+ F+A ++ F+NTAG  KHQAVA+R  AD S FY C F+G
Sbjct:  162 LSATISHEQTCLDGFQGTQGNAGETIKKALKTAVQLTHNGLAMVTEM--SNYLGQMQIPEMNSRRLL--SQEFPSWMDARARRLLNAPMSE-----------------VKPDIVVAQDGSGQYKTINEALNFVP---KKKNTTFVVHIKEGIYKEYVQVNRSMTHLVFIGDGPDKTVISGSKSYKDGITTYKTATVAIVGDHFIAKNIAFENTAGAIKHQAVAIRVLADESIFYNCKFDG 377          
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME24_ARATH (Putative pectinesterase/pectinesterase inhibitor 24 OS=Arabidopsis thaliana GN=PME24 PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.288e-18
Identity = 74/243 (30.45%), Postives = 113/243 (46.50%), Query Frame = 1
Query:   37 RPLLSGIVTNQQTCFDELVDSKSGIAAVLYEPLSNVTRLYSVSLGLVTHALDRNLXXXXXXXXXXXXWFLKNTNRF---REPLETLIKDIRKAPCHDCHKGERNLGEVESNGILVNQSVIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCS 756
            R  LS   T Q+TC + L              L N T L S +L ++T                   W  K  + F   R  L T   ++      D H G R L   +S  +     ++V+  G+  + TI  A+   P  S+     +                K   N++++GDG ++++++G  +VIDG  TF ++TFAV G+ F+A D+ F NTAGP+KHQAVAL  +ADL++FYRC+
Sbjct:  169 RTWLSSAGTYQRTCVETLAPDMRPFGE---SHLKNSTELTSNALAIIT-------------------WLGKIADSFKLRRRLLTTADVEV------DFHAGRRLL---QSTDLRKVADIVVAKDGSGKYRTIKRALQDVPEKSEKRTIIYVKKGVYFENVKVE---KKMWNVIVVGDGESKSIVSGRLNVIDGTPTFKTATFAVFGKGFMARDMGFINTAGPSKHQAVALMVSADLTAFYRCT 377          
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME1_ARATH (Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.288e-18
Identity = 73/252 (28.97%), Postives = 111/252 (44.05%), Query Frame = 1
Query:   46 LSGIVTNQQTCFDELVDSK--------SGIAAVLYEPLSNVTRLYSVSLGLVTHALDRNLXXXXXXXXXXXXWFLKNTNRFREPLETLIKDIRKAPCHDCHKGERNLGEVESNGIL----VNQSVIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFEG 765
            LS  VT+ +TCFD L + K        S I   L   +S  T   S SL +V+  L                            L   I   R+   H  H+   +  +     +L    +   V V+  GT +  T+ +A+A  P  S      F                K K N+++ GDG  +T+I+G+ + +DG  T+ ++TFA+ G+ F+  D+   NTAG AKHQAVA R+ +D S +Y+CSF+G
Sbjct:  181 LSATVTDHETCFDSLDELKQNKTEYANSTITQNLKSAMSRSTEFTSNSLAIVSKILSA-----------------------LSDLGIPIHRRRRLMSHH-HQQSVDFEKWARRRLLQTAGLKPDVTVAGDGTGDVLTVNEAVAKVPKKSLK---MFVIYVKSGTYVENVVMDKSKWNVMIYGDGKGKTIISGSKNFVDGTPTYETATFAIQGKGFIMKDIGIINTAGAAKHQAVAFRSGSDFSVYYQCSFDG 405          
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME56_ARATH (Probable pectinesterase 56 OS=Arabidopsis thaliana GN=PME56 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.197e-18
Identity = 52/128 (40.62%), Postives = 75/128 (58.59%), Query Frame = 1
Query:  382 VIVSPHGTDNFTTIGDAIAFSPNNS-KPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFE 762
            +IV+  G+ NFTT+ +A+A +P N  KP    F                K K NL L+GDG + TV++G+ + +DG  TF+S+T AV    F+A D+  +NTAGP K QAVALR + D++  YRC  +
Sbjct:   46 LIVAKDGSGNFTTVNEAVAAAPENGVKP----FVIYIKEGLYKEVIRIGKKKTNLTLVGDGRDLTVLSGDLNGVDGIKTFDSATLAVDESGFMAQDLCIRNTAGPEKRQAVALRISTDMTIIYRCRID 169          
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME19_ARATH (Probable pectinesterase/pectinesterase inhibitor 19 OS=Arabidopsis thaliana GN=PME19 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.197e-18
Identity = 59/161 (36.65%), Postives = 85/161 (52.80%), Query Frame = 1
Query:  283 LIKDIRKAPCHDCHKGERNLGEVESNGILVNQSVIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFEG 765
            LI  I  +P    H  +++L  + +  +     V+V+  GT  ++T+  AIA +P +S+     F                  K NL LIGDG + T+IT N S  +   TFN++T A +G  F+ VD+ F+NTAGPAK  AVALR + D+S  YRC  EG
Sbjct:  184 LISVIPNSPSWLFHVDKKDL-YLNAEALKKIADVVVAKDGTGKYSTVNAAIAAAPQHSQKR---FVIYIKTGIYDEIVVIENTKPNLTLIGDGQDLTIITSNLSASNVRRTFNTATVASNGNGFIGVDMCFRNTAGPAKGPAVALRVSGDMSVIYRCRVEG 340          
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME21_ARATH (Probable pectinesterase/pectinesterase inhibitor 21 OS=Arabidopsis thaliana GN=PME21 PE=2 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 2.429e-17
Identity = 47/132 (35.61%), Postives = 74/132 (56.06%), Query Frame = 1
Query:  370 VNQSVIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFEG 765
            V   ++V+  G+  + TI +A+ F P   K  +  F                K   +L+ IGDG ++T+I+GN +  DG TT+ ++T A+ G  F+A ++ F+NTAG  KHQAVA+R  +D S F+ C F+G
Sbjct:  252 VKPDIVVAQDGSGQYKTINEALQFVP---KKRNTTFVVHIKAGLYKEYVQVNKTMSHLVFIGDGPDKTIISGNKNYKDGITTYRTATVAIVGNYFIAKNIGFENTAGAIKHQAVAVRVQSDESIFFNCRFDG 380          
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME51_ARATH (Probable pectinesterase/pectinesterase inhibitor 51 OS=Arabidopsis thaliana GN=PME51 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.410e-17
Identity = 52/136 (38.24%), Postives = 76/136 (55.88%), Query Frame = 1
Query:  370 VNQSVIVSPHGTDNFTTIGDAIAFSPNNSKPEDG---YFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGN-HSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFEG 765
            + + V V   G   + T+ DA+     N+ PED     F               P  KKN++ IGDG+ +TVITG+ ++ + G TT+N++T  V G+ F+A D+TF+NTAGP  HQAVA R+++D S    C F G
Sbjct:  237 LKEDVTVCKDGKCGYKTVQDAV-----NAAPEDNGMRKFVIKISEGVYEENVIVPFEKKNVVFIGDGMGKTVITGSLNAGMPGITTYNTATVGVVGDGFMARDLTFQNTAGPDAHQAVAFRSDSDFSLIENCEFLG 367          
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME35_ARATH (Probable pectinesterase/pectinesterase inhibitor 35 OS=Arabidopsis thaliana GN=PME35 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.410e-17
Identity = 41/81 (50.62%), Postives = 55/81 (67.90%), Query Frame = 1
Query:  523 PKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFEG 765
            P  +KN++L+GDG  +TVI G+ S   GW T+ S+T A  G+ F+A D+TF N+AGP   QAVALR  +D S  YRCS +G
Sbjct:  272 PSKQKNVMLVGDGKGKTVIVGSRSNRGGWNTYQSATVAAMGDGFIARDITFVNSAGPNSEQAVALRVGSDRSVVYRCSIDG 352          
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME33_ARATH (Probable pectinesterase/pectinesterase inhibitor 33 OS=Arabidopsis thaliana GN=PME33 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 7.066e-17
Identity = 41/76 (53.95%), Postives = 56/76 (73.68%), Query Frame = 1
Query:  538 NLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFEG 765
            N++L+GDG  +T+IT   SV  G+TT+NS+T    G+RFVA D+TF NTAGP + QAVA+R+++DLS FYR    G
Sbjct:  331 NIMLVGDGERKTIITSGRSVQHGYTTYNSATGGFGGQRFVAKDMTFINTAGPLRGQAVAVRSSSDLSVFYRVGIHG 406          
The following BLAST results are available for this feature:
BLAST of CF835140 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
PME30_ARATH1.288e-1841.41Probable pectinesterase 30 OS=Arabidopsis thaliana... [more]
PME28_ARATH1.288e-1827.08Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME24_ARATH1.288e-1830.45Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME1_ARATH1.288e-1828.97Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 P... [more]
PME56_ARATH2.197e-1840.63Probable pectinesterase 56 OS=Arabidopsis thaliana... [more]
PME19_ARATH2.197e-1836.65Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME21_ARATH2.429e-1735.61Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME51_ARATH5.410e-1738.24Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME35_ARATH5.410e-1750.62Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME33_ARATH7.066e-1753.95Probable pectinesterase/pectinesterase inhibitor 3... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06L22_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06L22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835140 ID=CF835140; Name=CF835140; organism=Citrus sinensis; type=EST; length=765bp
CTGAGTCGATGACGGATGAATTCGTGGACAGAGTCACGACCTCTGCTGAG
TGGGATCGTCACGAATCAGCAGACTTGCTTTGACGAGCTTGTGGATTCGA
AGAGCGGCATTGCTGCTGTGCTGTATGAGCCGCTGTCGAATGTGACTCGT
TTGTACAGTGTTTCGCTTGGGCTCGTGACCCACGCACTGGACCGGAATTT
GAGGCGGAATAAGAAGCGAAGCAAACGGTCCAAGAATTGGTTTTTGAAGA
ACACGAACCGGTTTCGTGAACCGCTCGAGACTCTTATCAAGGATATAAGA
AAGGCACCTTGCCATGATTGCCACAAAGGAGAAAGAAATCTTGGTGAAGT
GGAGAGCAATGGAATTCTTGTAAACCAAAGTGTGATAGTGAGCCCACATG
GGACTGATAATTTCACAACAATCGGGGATGCCATTGCATTTTCTCCCAAT
AACTCCAAGCCCGAAGATGGGTATTTTGTTATCTATGCACGAGAAGCTGT
TTACGAAGAATACGTGGTTGTTCCTAAGCATAAGAAGAATCTCTTGCTCA
TTGGTGATGGCATCAATCGGACTGTCATTACTGGAAATCACAGTGTCATT
GATGGCTGGACTACTTTCAATTCTTCAACTTTCGCTGTTTCTGGTGAGAG
ATTTGTAGCGGTAGATGTTACATTTAAGAACACAGCTGGTCCTGCAAAGC
ACCAAGCAGTAGCTCTGAGGAACAATGCTGATCTCTCATCATTCTACCGT
TGCAGTTTTGAAGGC
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