CF835140
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME30_ARATH (Probable pectinesterase 30 OS=Arabidopsis thaliana GN=PME30 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.288e-18 Identity = 53/128 (41.41%), Postives = 73/128 (57.03%), Query Frame = 1 Query: 382 VIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFEG 765 V+V+ GT ++T+ AIA +P +S+ F K NL LIGDG + T+ITGN S + T+N++T A +G F+ VD+ F+NTAGPAK AVALR + D+S YRC EG Sbjct: 189 VVVAKDGTGKYSTVNAAIAAAPQHSQKR---FVIYIKTGIYDEIVVIENTKPNLTLIGDGQDLTIITGNLSASNVRRTYNTATVASNGNGFIGVDMCFRNTAGPAKGPAVALRVSGDMSVIYRCRVEG 313
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME28_ARATH (Putative pectinesterase/pectinesterase inhibitor 28 OS=Arabidopsis thaliana GN=PME28 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.288e-18 Identity = 65/240 (27.08%), Postives = 108/240 (45.00%), Query Frame = 1 Query: 46 LSGIVTNQQTCFDELVDSKSGIAAVLYEPLSNVTRLYSVSLGLVTHALDRNLXXXXXXXXXXXXWFLKNTNRFREPLETLIKDIRKAPCHDCHKGERNLGEVESNGILVNQSVIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFEG 765 LS ++++QTC D ++ + + L +L L +VT N L + F ++ + + AP + V ++V+ G+ + TI +A+ F P K ++ F + +L+ IGDG ++TVI+G+ S DG TT+ ++T A+ G+ F+A ++ F+NTAG KHQAVA+R AD S FY C F+G Sbjct: 162 LSATISHEQTCLDGFQGTQGNAGETIKKALKTAVQLTHNGLAMVTEM--SNYLGQMQIPEMNSRRLL--SQEFPSWMDARARRLLNAPMSE-----------------VKPDIVVAQDGSGQYKTINEALNFVP---KKKNTTFVVHIKEGIYKEYVQVNRSMTHLVFIGDGPDKTVISGSKSYKDGITTYKTATVAIVGDHFIAKNIAFENTAGAIKHQAVAIRVLADESIFYNCKFDG 377
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME24_ARATH (Putative pectinesterase/pectinesterase inhibitor 24 OS=Arabidopsis thaliana GN=PME24 PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.288e-18 Identity = 74/243 (30.45%), Postives = 113/243 (46.50%), Query Frame = 1 Query: 37 RPLLSGIVTNQQTCFDELVDSKSGIAAVLYEPLSNVTRLYSVSLGLVTHALDRNLXXXXXXXXXXXXWFLKNTNRF---REPLETLIKDIRKAPCHDCHKGERNLGEVESNGILVNQSVIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCS 756 R LS T Q+TC + L L N T L S +L ++T W K + F R L T ++ D H G R L +S + ++V+ G+ + TI A+ P S+ + K N++++GDG ++++++G +VIDG TF ++TFAV G+ F+A D+ F NTAGP+KHQAVAL +ADL++FYRC+ Sbjct: 169 RTWLSSAGTYQRTCVETLAPDMRPFGE---SHLKNSTELTSNALAIIT-------------------WLGKIADSFKLRRRLLTTADVEV------DFHAGRRLL---QSTDLRKVADIVVAKDGSGKYRTIKRALQDVPEKSEKRTIIYVKKGVYFENVKVE---KKMWNVIVVGDGESKSIVSGRLNVIDGTPTFKTATFAVFGKGFMARDMGFINTAGPSKHQAVALMVSADLTAFYRCT 377
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME1_ARATH (Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.288e-18 Identity = 73/252 (28.97%), Postives = 111/252 (44.05%), Query Frame = 1 Query: 46 LSGIVTNQQTCFDELVDSK--------SGIAAVLYEPLSNVTRLYSVSLGLVTHALDRNLXXXXXXXXXXXXWFLKNTNRFREPLETLIKDIRKAPCHDCHKGERNLGEVESNGIL----VNQSVIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFEG 765 LS VT+ +TCFD L + K S I L +S T S SL +V+ L L I R+ H H+ + + +L + V V+ GT + T+ +A+A P S F K K N+++ GDG +T+I+G+ + +DG T+ ++TFA+ G+ F+ D+ NTAG AKHQAVA R+ +D S +Y+CSF+G Sbjct: 181 LSATVTDHETCFDSLDELKQNKTEYANSTITQNLKSAMSRSTEFTSNSLAIVSKILSA-----------------------LSDLGIPIHRRRRLMSHH-HQQSVDFEKWARRRLLQTAGLKPDVTVAGDGTGDVLTVNEAVAKVPKKSLK---MFVIYVKSGTYVENVVMDKSKWNVMIYGDGKGKTIISGSKNFVDGTPTYETATFAIQGKGFIMKDIGIINTAGAAKHQAVAFRSGSDFSVYYQCSFDG 405
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME56_ARATH (Probable pectinesterase 56 OS=Arabidopsis thaliana GN=PME56 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.197e-18 Identity = 52/128 (40.62%), Postives = 75/128 (58.59%), Query Frame = 1 Query: 382 VIVSPHGTDNFTTIGDAIAFSPNNS-KPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFE 762 +IV+ G+ NFTT+ +A+A +P N KP F K K NL L+GDG + TV++G+ + +DG TF+S+T AV F+A D+ +NTAGP K QAVALR + D++ YRC + Sbjct: 46 LIVAKDGSGNFTTVNEAVAAAPENGVKP----FVIYIKEGLYKEVIRIGKKKTNLTLVGDGRDLTVLSGDLNGVDGIKTFDSATLAVDESGFMAQDLCIRNTAGPEKRQAVALRISTDMTIIYRCRID 169
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME19_ARATH (Probable pectinesterase/pectinesterase inhibitor 19 OS=Arabidopsis thaliana GN=PME19 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.197e-18 Identity = 59/161 (36.65%), Postives = 85/161 (52.80%), Query Frame = 1 Query: 283 LIKDIRKAPCHDCHKGERNLGEVESNGILVNQSVIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFEG 765 LI I +P H +++L + + + V+V+ GT ++T+ AIA +P +S+ F K NL LIGDG + T+IT N S + TFN++T A +G F+ VD+ F+NTAGPAK AVALR + D+S YRC EG Sbjct: 184 LISVIPNSPSWLFHVDKKDL-YLNAEALKKIADVVVAKDGTGKYSTVNAAIAAAPQHSQKR---FVIYIKTGIYDEIVVIENTKPNLTLIGDGQDLTIITSNLSASNVRRTFNTATVASNGNGFIGVDMCFRNTAGPAKGPAVALRVSGDMSVIYRCRVEG 340
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME21_ARATH (Probable pectinesterase/pectinesterase inhibitor 21 OS=Arabidopsis thaliana GN=PME21 PE=2 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 2.429e-17 Identity = 47/132 (35.61%), Postives = 74/132 (56.06%), Query Frame = 1 Query: 370 VNQSVIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFEG 765 V ++V+ G+ + TI +A+ F P K + F K +L+ IGDG ++T+I+GN + DG TT+ ++T A+ G F+A ++ F+NTAG KHQAVA+R +D S F+ C F+G Sbjct: 252 VKPDIVVAQDGSGQYKTINEALQFVP---KKRNTTFVVHIKAGLYKEYVQVNKTMSHLVFIGDGPDKTIISGNKNYKDGITTYRTATVAIVGNYFIAKNIGFENTAGAIKHQAVAVRVQSDESIFFNCRFDG 380
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME51_ARATH (Probable pectinesterase/pectinesterase inhibitor 51 OS=Arabidopsis thaliana GN=PME51 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.410e-17 Identity = 52/136 (38.24%), Postives = 76/136 (55.88%), Query Frame = 1 Query: 370 VNQSVIVSPHGTDNFTTIGDAIAFSPNNSKPEDG---YFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGN-HSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFEG 765 + + V V G + T+ DA+ N+ PED F P KKN++ IGDG+ +TVITG+ ++ + G TT+N++T V G+ F+A D+TF+NTAGP HQAVA R+++D S C F G Sbjct: 237 LKEDVTVCKDGKCGYKTVQDAV-----NAAPEDNGMRKFVIKISEGVYEENVIVPFEKKNVVFIGDGMGKTVITGSLNAGMPGITTYNTATVGVVGDGFMARDLTFQNTAGPDAHQAVAFRSDSDFSLIENCEFLG 367
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME35_ARATH (Probable pectinesterase/pectinesterase inhibitor 35 OS=Arabidopsis thaliana GN=PME35 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.410e-17 Identity = 41/81 (50.62%), Postives = 55/81 (67.90%), Query Frame = 1 Query: 523 PKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFEG 765 P +KN++L+GDG +TVI G+ S GW T+ S+T A G+ F+A D+TF N+AGP QAVALR +D S YRCS +G Sbjct: 272 PSKQKNVMLVGDGKGKTVIVGSRSNRGGWNTYQSATVAAMGDGFIARDITFVNSAGPNSEQAVALRVGSDRSVVYRCSIDG 352
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME33_ARATH (Probable pectinesterase/pectinesterase inhibitor 33 OS=Arabidopsis thaliana GN=PME33 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 7.066e-17 Identity = 41/76 (53.95%), Postives = 56/76 (73.68%), Query Frame = 1 Query: 538 NLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFEG 765 N++L+GDG +T+IT SV G+TT+NS+T G+RFVA D+TF NTAGP + QAVA+R+++DLS FYR G Sbjct: 331 NIMLVGDGERKTIITSGRSVQHGYTTYNSATGGFGGQRFVAKDMTFINTAGPLRGQAVAVRSSSDLSVFYRVGIHG 406 The following BLAST results are available for this feature:
BLAST of CF835140 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835140 ID=CF835140; Name=CF835140; organism=Citrus sinensis; type=EST; length=765bpback to top |