CF835140

Overview
NameCF835140
Unique NameCF835140
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length765
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME_PETIN (Pectinesterase OS=Petunia integrifolia GN=PPE1 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 9.229e-17
Identity = 51/127 (40.16%), Postives = 73/127 (57.48%), Query Frame = 1
Query:  388 VSPHGTDNFTTIGDAIAFSPN-NSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFEG 765
            V+  G+  + TI +A+   P  N++P    F               PK   N++LIG+G  +T ITGN SV DG +TF+++T  V+G  FVA ++ F+NTAGP K QAVALR +AD +  Y C  +G
Sbjct:   61 VALDGSGQYKTIKEALDAVPKKNTEP----FIIFIKAGVYKEYIDIPKSMTNVVLIGEGPTKTKITGNKSVKDGPSTFHTTTVGVNGANFVAKNIGFENTAGPEKEQAVALRVSADKAIIYNCQIDG 183          
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME45_ARATH (Putative pectinesterase/pectinesterase inhibitor 45 OS=Arabidopsis thaliana GN=PME45 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.574e-16
Identity = 53/148 (35.81%), Postives = 75/148 (50.68%), Query Frame = 1
Query:  322 HKGERNLGEVESNGILVNQSVIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFEG 765
            +K  R L  V+   +  N +V  +  G+ NFTTI  A+   P   +   G +                K K N+ ++GDG  +T++TGN S      TF ++TF   GE F+A  + F+NTAGP  HQAVA+R  +D S F  C FEG
Sbjct:  279 NKERRMLKAVDVKALKPNATV--AKDGSGNFTTINAALKAMPAKYQ---GRYTIYIKHGIYDESVIIDKKKPNVTMVGDGSQKTIVTGNKSHAKKIRTFLTATFVAQGEGFMAQSMGFRNTAGPEGHQAVAIRVQSDRSVFLNCRFEG 421          
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME13_ARATH (Probable pectinesterase/pectinesterase inhibitor 13 OS=Arabidopsis thaliana GN=PME13 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.056e-16
Identity = 57/173 (32.95%), Postives = 83/173 (47.98%), Query Frame = 1
Query:  262 FREPLETLIKDIRK-----APCHDCHKGERNLGEVESNGILVNQSVIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFEG 765
            F E L  ++K + +      P    +   R L  V+   +  N +V  +  G+ +FTTI DA+   P      +G +                K K NL ++GDG  +T++TGN S      TF ++TF   GE F+A  + F+NTAG   HQAVA+R  +D S F  C FEG
Sbjct:  259 FTENLSPVMKVVERHLLDGIPSWVSNDDRRMLRAVDVKALKPNATV--AKDGSGDFTTINDALRAMPEKY---EGRYIIYVKQGIYDEYVTVDKKKANLTMVGDGSQKTIVTGNKSHAKKIRTFLTATFVAQGEGFMAQSMGFRNTAGSEGHQAVAIRVQSDRSIFLNCRFEG 426          
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME37_ARATH (Probable pectinesterase/pectinesterase inhibitor VGDH2 OS=Arabidopsis thaliana GN=VGDH2 PE=2 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 7.813e-16
Identity = 52/148 (35.14%), Postives = 73/148 (49.32%), Query Frame = 1
Query:  328 GERNLGEVESNGILVNQSVIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSV--IDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFEG 765
            G+  +GE    G  +  + +V+  G+  F TI +A+   P+ +    G                 PK K N+ + GDG  +T+IT + SV    G TT  S T  V  E F+A  + FKNTAGP  HQAVALR N D +  + C F+G
Sbjct:  259 GDDGIGEGGGGGGKIKATHVVAKDGSGQFKTISEAVMACPDKNP---GRCIIHIKAGIYNEQVRIPKKKNNIFMFGDGATQTIITFDRSVKLSPGTTTSLSGTVQVESEGFMAKWIGFKNTAGPLGHQAVALRVNGDRAVIFNCRFDG 403          
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME4_ARATH (Pectinesterase 4 OS=Arabidopsis thaliana GN=PME4 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.128e-14
Identity = 49/137 (35.77%), Postives = 68/137 (49.64%), Query Frame = 1
Query:  361 GILVNQSVIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVI--DGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFEG 765
            G  V  + +V+  G+  F T+  A+   P N++   G                 PK K N+ + GDG  +TVI+ N SV    G TT  S+T  V  E F+A  + FKNTAGP  HQA A+R N D +  + C F+G
Sbjct:  270 GARVRTNFVVAKDGSGQFKTVQQAVDACPENNR---GRCIIYIKAGLYREQVIIPKKKNNIFMFGDGARKTVISYNRSVALSRGTTTSLSATVQVESEGFMAKWMGFKNTAGPMGHQAAAIRVNGDRAVIFNCRFDG 403          
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME58_ARATH (Probable pectinesterase/pectinesterase inhibitor 58 OS=Arabidopsis thaliana GN=PME58 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.473e-14
Identity = 68/245 (27.76%), Postives = 109/245 (44.49%), Query Frame = 1
Query:   37 RPLLSGIVTNQQTCFDELVDSKSGIAAVLYEPLSNVTRLYSVSLGLVTHALDRNLXXXXXXXXXXXXWFLKNTNRFREPLETLIKDIRKAPCHDCHKGERNLGEVESNGILVNQSVIVSPHGTDNFTTIGDAIAFSPN-NSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWT-TFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFEG 765
            R  LSG +  QQTC D   ++ S ++  + +       L S  L ++T+    NL                +  ++   L +    I      +  +     G V++N       V+V+  G+  + TI +A+   P  N KP    F                K   ++  IGDG  +T ITG+ +   G   T+ ++T A++G+ F A ++ F+NTAGP  HQAVALR +ADL+ FY C  +G
Sbjct:  159 RVWLSGSIAYQQTCMDTFEETNSKLSQDMQKIFKTSRELTSNGLAMITNI--SNLLGEFNVTGVTG-----DLGKYARKLLSAEDGIPSWVGPNTRRLMATKGGVKAN-------VVVAHDGSGQYKTINEALNAVPKANQKP----FVIYIKQGVYNEKVDVTKKMTHVTFIGDGPTKTKITGSLNYYIGKVKTYLTATVAINGDNFTAKNIGFENTAGPEGHQAVALRVSADLAVFYNCQIDG 385          
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME43_ARATH (Putative pectinesterase/pectinesterase inhibitor 43 OS=Arabidopsis thaliana GN=PME43 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.282e-14
Identity = 48/138 (34.78%), Postives = 76/138 (55.07%), Query Frame = 1
Query:  355 SNGILVNQSVIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVI-DGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFEG 765
            +NGI  N  V+V+  G+    TI  A+A  P  +  +   F                K   +++ +GDG  +TVITG+ + + D   T+ +++ AV+G+ F+A D+ F+NTAG A+HQAVALR +AD + F+ C   G
Sbjct:  385 NNGIKAN--VVVAKDGSGKCKTIAQALAMVPMKNTKK---FVIHIKEGVYKEKVEVTKKMLHVMFVGDGPTKTVITGDIAFLPDQVGTYRTASVAVNGDYFMAKDIGFENTAGAARHQAVALRVSADFAVFFNCHMNG 517          
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME5_ARATH (Pectinesterase 5 OS=Arabidopsis thaliana GN=PME5 PE=2 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 4.287e-14
Identity = 48/137 (35.04%), Postives = 66/137 (48.18%), Query Frame = 1
Query:  361 GILVNQSVIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSV--IDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFEG 765
            G  +  + +V+  G+  F T+  A+   P  +    G                 PK K N+ + GDG  +TVI+ N SV    G TT  S T  V  E F+A  + FKNTAGP  HQAVA+R N D +  + C F+G
Sbjct:  277 GARIRATFVVAKDGSGQFKTVQQAVNACPEKNP---GRCIIHIKAGIYREQVIIPKKKNNIFMFGDGARKTVISYNRSVKLSPGTTTSLSGTVQVESEGFMAKWIGFKNTAGPMGHQAVAIRVNGDRAVIFNCRFDG 410          
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME64_ARATH (Probable pectinesterase/pectinesterase inhibitor 64 OS=Arabidopsis thaliana GN=PME64 PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 5.599e-14
Identity = 41/82 (50.00%), Postives = 55/82 (67.07%), Query Frame = 1
Query:  523 PKHKKNLLLIGDGINRTVITGNHSVID-GWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFEG 765
            P  KKN++ IGDG+ +TVITG+ +V   G TTF S+T  V G+ F+A D+T +NTAG   HQAVA R+++D S    C F G
Sbjct:  336 PFEKKNVVFIGDGMGKTVITGSLNVGQPGMTTFESATVGVLGDGFMARDLTIENTAGADAHQAVAFRSDSDFSVLENCEFLG 417          
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME57_ARATH (Putative pectinesterase 57 OS=Arabidopsis thaliana GN=PME57 PE=3 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 5.599e-14
Identity = 46/127 (36.22%), Postives = 65/127 (51.18%), Query Frame = 1
Query:  382 VIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFE 762
            ++V+   T N+  +  AIA +P +S+     F                  K NL LI DG + T+IT N S  +   TFN++TFA +G+ F+ VD+ F+NT  P K   V LR N D+S  YRC  E
Sbjct:   78 ILVAKDVTGNYNIVNVAIAAAPQHSQKR---FVIYIKTSIYVEIVVIGNMKSNLTLIADGQDSTIITFNLSSSNSKRTFNTATFASNGDGFIRVDMCFRNTTWPVKGPVVTLRVNGDMSIIYRCRVE 201          
The following BLAST results are available for this feature:
BLAST of CF835140 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
PME_PETIN9.229e-1740.16Pectinesterase OS=Petunia integrifolia GN=PPE1 PE=... [more]
PME45_ARATH1.574e-1635.81Putative pectinesterase/pectinesterase inhibitor 4... [more]
PME13_ARATH2.056e-1632.95Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME37_ARATH7.813e-1635.14Probable pectinesterase/pectinesterase inhibitor V... [more]
PME4_ARATH1.128e-1435.77Pectinesterase 4 OS=Arabidopsis thaliana GN=PME4 P... [more]
PME58_ARATH1.473e-1427.76Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME43_ARATH3.282e-1434.78Putative pectinesterase/pectinesterase inhibitor 4... [more]
PME5_ARATH4.287e-1435.04Pectinesterase 5 OS=Arabidopsis thaliana GN=PME5 P... [more]
PME64_ARATH5.599e-1450.00Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME57_ARATH5.599e-1436.22Putative pectinesterase 57 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06L22_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06L22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835140 ID=CF835140; Name=CF835140; organism=Citrus sinensis; type=EST; length=765bp
CTGAGTCGATGACGGATGAATTCGTGGACAGAGTCACGACCTCTGCTGAG
TGGGATCGTCACGAATCAGCAGACTTGCTTTGACGAGCTTGTGGATTCGA
AGAGCGGCATTGCTGCTGTGCTGTATGAGCCGCTGTCGAATGTGACTCGT
TTGTACAGTGTTTCGCTTGGGCTCGTGACCCACGCACTGGACCGGAATTT
GAGGCGGAATAAGAAGCGAAGCAAACGGTCCAAGAATTGGTTTTTGAAGA
ACACGAACCGGTTTCGTGAACCGCTCGAGACTCTTATCAAGGATATAAGA
AAGGCACCTTGCCATGATTGCCACAAAGGAGAAAGAAATCTTGGTGAAGT
GGAGAGCAATGGAATTCTTGTAAACCAAAGTGTGATAGTGAGCCCACATG
GGACTGATAATTTCACAACAATCGGGGATGCCATTGCATTTTCTCCCAAT
AACTCCAAGCCCGAAGATGGGTATTTTGTTATCTATGCACGAGAAGCTGT
TTACGAAGAATACGTGGTTGTTCCTAAGCATAAGAAGAATCTCTTGCTCA
TTGGTGATGGCATCAATCGGACTGTCATTACTGGAAATCACAGTGTCATT
GATGGCTGGACTACTTTCAATTCTTCAACTTTCGCTGTTTCTGGTGAGAG
ATTTGTAGCGGTAGATGTTACATTTAAGAACACAGCTGGTCCTGCAAAGC
ACCAAGCAGTAGCTCTGAGGAACAATGCTGATCTCTCATCATTCTACCGT
TGCAGTTTTGAAGGC
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