CF835140
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME23_ARATH (Probable pectinesterase/pectinesterase inhibitor 23 OS=Arabidopsis thaliana GN=PME23 PE=2 SV=3) HSP 1 Score: 76.6406 bits (187), Expect = 1.629e-13 Identity = 68/248 (27.42%), Postives = 101/248 (40.73%), Query Frame = 1 Query: 37 RPLLSGIVTNQQTCFDELVDSKSGIAAVLYEPLSNVTRLYSVSLGLVTHAL----DRNLXXXXXXXXXXXXWFLKNTNRFREPLETLIKDIRKAPCHDCHKGERNLGEVESNGILVNQSVIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSV-IDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFEG 765 R LSG + QQTC D + KS + + + L S SL +VT + NL T + L+ P + R + V + +V+ GT F TI DA+ P +K F K ++ IGDG N+T+ITG+ + I TF ++T + G+ F A ++ +NTAGP QAVALR +AD + F+ C +G Sbjct: 153 RVWLSGSIAFQQTCMDSFGEIKSNLMQDMLKIFKTSRELSSNSLAMVTRISTLIPNSNLTGL--------------TGALAKYARKLLSTEDSIPTWVGPEARRLMAAQGGGPGPVKANAVVAQDGTGQFKTITDALNAVPKGNKVP---FIIHIKEGIYKEKVTVTKKMPHVTFIGDGPNKTLITGSLNFGIGKVKTFLTATITIEGDHFTAKNIGIENTAGPEGGQAVALRVSADYAVFHSCQIDG 383
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME_BRANA (Probable pectinesterase/pectinesterase inhibitor OS=Brassica napus GN=BP19 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.128e-13 Identity = 48/147 (32.65%), Postives = 69/147 (46.94%), Query Frame = 1 Query: 331 ERNLGEVESNGILVNQSVIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSV--IDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFEG 765 + +GE G + + +V+ G+ F TI +A+ P + G PK N+ + GDG +T+IT + SV G TT S T V E F+A + F+NTAGP HQAVA R N D + + C F+G Sbjct: 256 DEGIGEGGGGGGKIKPTHVVAKDGSGQFKTISEAVKACPEKNP---GRCIIYIKAGVYKEQVTIPKKVNNVFMFGDGATQTIITFDRSVGLSPGTTTSLSGTVQVESEGFMAKWIGFQNTAGPLGHQAVAFRVNGDRAVIFNCRFDG 399
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME_BRACM (Pectinesterase/pectinesterase inhibitor (Fragment) OS=Brassica campestris PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.379e-12 Identity = 47/147 (31.97%), Postives = 69/147 (46.94%), Query Frame = 1 Query: 331 ERNLGEVESNGILVNQSVIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSV--IDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFEG 765 + +GE G + + +V+ G+ F TI +A+ P + G PK N+ + GDG +T+IT + SV G TT S T V E F+A + F+NTAGP +QAVA R N D + + C F+G Sbjct: 243 DEGIGEGGGGGGKIKPTHVVAKDGSGQFKTISEAVKACPEKNP---GRCIIYIKAGVYKEQVTIPKKVNNVFMFGDGATQTIITFDRSVGLSPGTTTSLSGTVQVESEGFMAKWIGFQNTAGPLGNQAVAFRVNGDRAVIFNCRFDG 386 The following BLAST results are available for this feature:
BLAST of CF835140 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835140 ID=CF835140; Name=CF835140; organism=Citrus sinensis; type=EST; length=765bpback to top |