CF835141

Overview
NameCF835141
Unique NameCF835141
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length707
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835141 vs. ExPASy Swiss-Prot
Match: PME17_ARATH (Probable pectinesterase/pectinesterase inhibitor 17 OS=Arabidopsis thaliana GN=PME17 PE=2 SV=2)

HSP 1 Score: 243.432 bits (620), Expect = 8.743e-64
Identity = 116/195 (59.49%), Postives = 147/195 (75.38%), Query Frame = -2
Query:  125 RCSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVFQNCNIYARKPMPNQKNAVTAQGRTDPNQNTGIAIQNCSIVAAPDFAKDLNSTATTLNYLGRPWKEFSRTVYMQSYIGDLISPVGWLEWNGTVGLDTLYYGEFRNYGPGANTTMRVKWPGYSLM-NASQALNFTVYNFTMGDTWLPDTDIPFCGGL 706
            +CSFE YQDTLYVHS RQFYR+CD+YGTVDFIFGNAAAV QNCNI+AR+P  ++ N +TAQGR+DPNQNTGI I N  + AA D    L ST T   YLGRPW+++SRTV+M++ +  LI P GWLEW+G   L TL+Y EF+N GPGA+T+ RV WPG+ ++ +AS+A  FTV  F  G +W+P + +PF  GL
Sbjct:  322 QCSFEAYQDTLYVHSNRQFYRDCDVYGTVDFIFGNAAAVLQNCNIFARRPR-SKTNTITAQGRSDPNQNTGIIIHNSRVTAASDLRPVLGSTKT---YLGRPWRQYSRTVFMKTSLDSLIDPRGWLEWDGNFALKTLFYAEFQNTGPGASTSGRVTWPGFRVLGSASEASKFTVGTFLAGGSWIP-SSVPFTSGL 511          
BLAST of CF835141 vs. ExPASy Swiss-Prot
Match: PME22_ARATH (Putative pectinesterase/pectinesterase inhibitor 22 OS=Arabidopsis thaliana GN=PME22 PE=3 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 1.948e-63
Identity = 114/194 (58.76%), Postives = 134/194 (69.07%), Query Frame = -2
Query:  125 RCSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVFQNCNIYARKPMPNQKNAVTAQGRTDPNQNTGIAIQNCSIVAAPDFAKDLNSTATTLNYLGRPWKEFSRTVYMQSYIGDLISPVGWLEWNGTVGLDTLYYGEFRNYGPGANTTMRVKWPGYSLMNASQALNFTVYNFTMGDTWLPDTDIPFCGGL 706
            RCS EGYQDTLY HSLRQFYR+C+IYGT+DFIFGN AAV QNC IY R P+P QK  +TAQGR  PNQNTG  IQN  ++            AT   YLGRPWK +SRTVYM +Y+  L+ P GWLEW G   LDTL+YGE+ N GPG  ++ RVKWPGY +M+   AL+FTV +F  G  WLP T + F  GL
Sbjct:  360 RCSVEGYQDTLYAHSLRQFYRDCEIYGTIDFIFGNGAAVLQNCKIYTRVPLPLQKVTITAQGRKSPNQNTGFVIQNSYVL------------ATQPTYLGRPWKLYSRTVYMNTYMSQLVQPRGWLEWFGNFALDTLWYGEYNNIGPGWRSSGRVKWPGYHIMDKRTALSFTVGSFIDGRRWLPATGVTFTAGL 541          
BLAST of CF835141 vs. ExPASy Swiss-Prot
Match: PME61_ARATH (Probable pectinesterase/pectinesterase inhibitor 61 OS=Arabidopsis thaliana GN=PME61 PE=1 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 2.544e-63
Identity = 115/195 (58.97%), Postives = 136/195 (69.74%), Query Frame = -2
Query:  125 RCSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVFQNCNIYARKPMPNQKNAVTAQGRTDPNQNTGIAIQNCSIVAAPDFAKDLNSTATTLNYLGRPWKEFSRTVYMQSYIGDLISPVGWLEWNGTVGLDTLYYGEFRNYGPGANTTMRVKWPGYSLMNAS-QALNFTVYNFTMGDTWLPDTDIPFCGGL 706
            RC+  GYQD LYVHS RQF+REC+IYGTVDFIFGNAA + Q+CNIYARKPM  QK  +TAQ R DPNQNTGI+I  C ++A PD      S  T   YLGRPWK +SR VYM S +GD I P GWLEWNG   LD+LYYGE+ N G G+    RVKWPGY ++ ++ +A  FTV  F  G +WLP T + F  GL
Sbjct:  394 RCNIIGYQDALYVHSNRQFFRECEIYGTVDFIFGNAAVILQSCNIYARKPMAQQKITITAQNRKDPNQNTGISIHACKLLATPDLEASKGSYPT---YLGRPWKLYSRVVYMMSDMGDHIDPRGWLEWNGPFALDSLYYGEYMNKGLGSGIGQRVKWPGYHVITSTVEASKFTVAQFISGSSWLPSTGVSFFSGL 585          
BLAST of CF835141 vs. ExPASy Swiss-Prot
Match: PME12_ARATH (Probable pectinesterase/pectinesterase inhibitor 12 OS=Arabidopsis thaliana GN=PME12 PE=2 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 4.339e-63
Identity = 109/194 (56.19%), Postives = 134/194 (69.07%), Query Frame = -2
Query:  125 RCSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVFQNCNIYARKPMPNQKNAVTAQGRTDPNQNTGIAIQNCSIVAAPDFAKDLNSTATTLNYLGRPWKEFSRTVYMQSYIGDLISPVGWLEWNGTVGLDTLYYGEFRNYGPGANTTMRVKWPGYSLMNASQALNFTVYNFTMGDTWLPDTDIPFCGGL 706
            RC  +GYQDTLY HS RQFYRECDIYGT+D+IFGNAA VFQ CNI ++ PMP Q   +TAQ R   +++TGI++QNCSI+A+ D     NS+    +YLGRPW+EFSRTV M+SYI + I   GW +WNG   LDTLYYGE+ N GPG+ T  RV WPG+ +M    A NFT   F  GD WL  T  P+  G+
Sbjct:  357 RCVIDGYQDTLYTHSFRQFYRECDIYGTIDYIFGNAAVVFQGCNIVSKLPMPGQFTVITAQSRDTQDEDTGISMQNCSILASEDL---FNSSNKVKSYLGRPWREFSRTVVMESYIDEFIDGSGWSKWNGGEALDTLYYGEYNNNGPGSETVKRVNWPGFHIMGYEDAFNFTATEFITGDGWLGSTSFPYDNGI 547          
BLAST of CF835141 vs. ExPASy Swiss-Prot
Match: PME44_ARATH (Probable pectinesterase/pectinesterase inhibitor 44 OS=Arabidopsis thaliana GN=PME44 PE=2 SV=2)

HSP 1 Score: 238.81 bits (608), Expect = 2.154e-62
Identity = 112/197 (56.85%), Postives = 139/197 (70.56%), Query Frame = -2
Query:  119 RCSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVFQNCNIYARKPMPNQKNAVTAQGRTDPNQNTGIAIQNCSIVAAPDFAKDLNSTATTLNYLGRPWKEFSRTVYMQSYIGDLISPVGWLEWNGTVGLDTLYYGEFRNYGPGANTTMRVKWPGYSLMNAS-QALNFTVYNFTMGDTWLPDTDIPFCGGLVV 706
            RC+  GYQDTLY H++RQFYREC I GTVDFIFG+   VFQNC I A++ +PNQKN +TAQGR D NQ +G +IQ  +I A  D    LN+T T   YLGRPWK +SRTV++++ + D++ P GWLEWN    LDTL+YGEF NYGPG+  + RVKWPGY + N S QA NFTV  F  G+ WLP T + F  GL +
Sbjct:  332 RCAMRGYQDTLYTHTMRQFYRECTITGTVDFIFGDGTVVFQNCQILAKRGLPNQKNTITAQGRKDVNQPSGFSIQFSNISADADLVPYLNTTRT---YLGRPWKLYSRTVFIRNNMSDVVRPEGWLEWNADFALDTLFYGEFMNYGPGSGLSSRVKWPGYHVFNNSDQANNFTVSQFIKGNLWLPSTGVTFSDGLYI 525          
BLAST of CF835141 vs. ExPASy Swiss-Prot
Match: PME21_SOLLC (Pectinesterase 2.1 OS=Solanum lycopersicum GN=PME2.1 PE=2 SV=2)

HSP 1 Score: 234.958 bits (598), Expect = 3.110e-61
Identity = 111/195 (56.92%), Postives = 137/195 (70.26%), Query Frame = -2
Query:  125 RCSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVFQNCNIYARKPMPNQKNAVTAQGRTDPNQNTGIAIQNCSIVAAPDFAKDLNSTATTLNYLGRPWKEFSRTVYMQSYIGDLISPVGWLEWNGTVGLDTLYYGEFRNYGPGANTTMRVKWPGYSLM-NASQALNFTVYNFTMGDTWLPDTDIPFCGGL 706
            RC  + YQDTLY HS RQFYR+  + GT+DFIFGNAA VFQ C + ARKP   Q+N VTAQGRTDPNQ TG +IQ C I+A+PD    +    T   YLGRPWK++SRTV M+SY+G LI P GW EW+G   L TLYYGEF N GPGA T+ RVKWPGY ++ + ++A++FTV     G +WL  TD+ +  GL
Sbjct:  357 RCRIDAYQDTLYAHSQRQFYRDSYVTGTIDFIFGNAAVVFQKCQLVARKPGKYQQNMVTAQGRTDPNQATGTSIQFCDIIASPDLKPVVKEFPT---YLGRPWKKYSRTVVMESYLGGLIDPSGWAEWHGDFALKTLYYGEFMNNGPGAGTSKRVKWPGYHVITDPAEAMSFTVAKLIQGGSWLRSTDVAYVDGL 548          
BLAST of CF835141 vs. ExPASy Swiss-Prot
Match: PME16_ARATH (Probable pectinesterase/pectinesterase inhibitor 16 OS=Arabidopsis thaliana GN=PME16 PE=2 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 4.061e-61
Identity = 115/196 (58.67%), Postives = 140/196 (71.43%), Query Frame = -2
Query:  122 RCSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVFQNCNIYARKPMPNQKNAVTAQGRTDPNQNTGIAIQNCSIVAAPDFAKDLNSTATTLNYLGRPWKEFSRTVYMQSYIGDLISPVGWLEWNGTVGLDTLYYGEFRNYGPGANTTMRVKWPG-YSLMNASQALNFTVYNFTMGDTWLPDTDIPFCGGLV 706
            RCS EGYQD+LY HS RQFYRE DI GTVDFIFGN+A VFQ+CNI ARKP+P Q+N VTAQGR++P QNTGIAIQNC I            TA ++ YLGRPWKE+SRTV MQS+IG  I P GW  W+G  GL +L+YGE+ N GPG++ + RVKW G +  +  ++A  FTV +F  G+ WLP T + F  GLV
Sbjct:  334 RCSVEGYQDSLYTHSKRQFYRETDITGTVDFIFGNSAVVFQSCNIAARKPLPGQRNFVTAQGRSNPGQNTGIAIQNCRI------------TAESMTYLGRPWKEYSRTVVMQSFIGGSIHPSGWSPWSGGFGLKSLFYGEYGNSGPGSSVSGRVKWSGCHPSLTVTEAEKFTVASFIDGNIWLPSTGVSFDPGLV 517          
BLAST of CF835141 vs. ExPASy Swiss-Prot
Match: PME3_SOLLC (Pectinesterase 3 OS=Solanum lycopersicum GN=PME3 PE=3 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 9.048e-61
Identity = 114/196 (58.16%), Postives = 133/196 (67.86%), Query Frame = -2
Query:  122 RCSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVFQNCNIYARKPMPNQKNAVTAQGRTDPNQNTGIAIQNCSIVAAPDFAKDLNSTATTLNYLGRPWKEFSRTVYMQSYIGDLISPVGWLEWNGTVGLDTLYYGEFRNYGPGANTTMRVKWPGYSLM-NASQALNFTVYNFTMGDTWLPDTDIPFCGGLV 706
            RC  + YQDTLY HS RQFYR+  + GTVDFIFGNAA VFQ C I ARKP   QKN VTAQGRTDPNQ TG +IQ C I+A+PD    +N   T   YLGRPWK+ SRTV MQSY+   I P GW EW G   L TLYYGEF N GPGA T+ RVKWPGY ++ + ++A+ FTV     G +WL  T + +  GLV
Sbjct:  351 RCRIDAYQDTLYAHSQRQFYRDSYVTGTVDFIFGNAAVVFQKCQIVARKPNKRQKNMVTAQGRTDPNQATGTSIQFCDIIASPDLEPVMNEYKT---YLGRPWKKHSRTVVMQSYLDGHIDPSGWFEWRGDFALKTLYYGEFMNNGPGAGTSKRVKWPGYHVITDPNEAMPFTVAELIQGGSWLNSTSVAYVEGLV 543          
BLAST of CF835141 vs. ExPASy Swiss-Prot
Match: PME36_ARATH (Probable pectinesterase/pectinesterase inhibitor 36 OS=Arabidopsis thaliana GN=PME36 PE=2 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.182e-60
Identity = 109/195 (55.90%), Postives = 142/195 (72.82%), Query Frame = -2
Query:  125 RCSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVFQNCNIYARKPMPNQKNAVTAQGRTDPNQNTGIAIQNCSIVAAPDFAKDLNSTATTLNYLGRPWKEFSRTVYMQSYIGDLISPVGWLEWNGTVGLDTLYYGEFRNYGPGANTTMRVKWPGYSLMNA-SQALNFTVYNFTMGDTWLPDTDIPFCGGL 706
            RCSF+GYQDTL+ HSLRQFYR+  IYGT+DFIFG+AAAVFQNC+I+ R+PM +Q N +TAQGR DP+ N+GI+IQ+  I AAP+F           +YLGRPWK++SRTV++++ I +LI P GW EW+G+  L TLYYGEF N G GA T  RV WPG+ ++    +A  FTV  F  GD+W+P T +PF  G+
Sbjct:  328 RCSFKGYQDTLFTHSLRQFYRDRHIYGTIDFIFGDAAAVFQNCDIFVRRPMDHQGNMITAQGRDDPHTNSGISIQHSRIRAAPEFEA---VKGRFKSYLGRPWKKYSRTVFLKTDIDELIDPRGWREWSGSYALSTLYYGEFMNTGAGAGTGRRVNWPGFHVLRGEEEASPFTVSRFIQGDSWIPITGVPFSAGV 519          
BLAST of CF835141 vs. ExPASy Swiss-Prot
Match: PME1_FICAW (Pectinesterase/pectinesterase inhibitor OS=Ficus awkeotsang PE=1 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.182e-60
Identity = 111/195 (56.92%), Postives = 136/195 (69.74%), Query Frame = -2
Query:  125 RCSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVFQNCNIYARKPMPNQKNAVTAQGRTDPNQNTGIAIQNCSIVAAPDFAKDLNSTATTLNYLGRPWKEFSRTVYMQSYIGDLISPVGWLEWNGTVGLDTLYYGEFRNYGPGANTTMRVKWPGYSLMNASQ-ALNFTVYNFTMGDTWLPDTDIPFCGGL 706
            RC  + YQDTLY H+ RQFYR+ +I GTVDFIFGNAA VFQNCN+  RK M  Q+N +TAQGRTDPNQNTG +IQNC I A+ D         T  +YLGRPWKE+SRTV M+SYI D+I P GWLEW+    L TL+YGE+RN GPG+ T+ RVKWPGY ++ + + A  FTV     G +WL  T + +  GL
Sbjct:  352 RCRIDAYQDTLYPHNYRQFYRDRNITGTVDFIFGNAAVVFQNCNLIPRKQMKGQENTITAQGRTDPNQNTGTSIQNCEIFASADLEP---VEDTFKSYLGRPWKEYSRTVVMESYISDVIDPAGWLEWDRDFALKTLFYGEYRNGGPGSGTSERVKWPGYHVITSPEVAEQFTVAELIQGGSWLGSTGVDYTAGL 543          
The following BLAST results are available for this feature:
BLAST of CF835141 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
PME17_ARATH8.743e-6459.49Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME22_ARATH1.948e-6358.76Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME61_ARATH2.544e-6358.97Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME12_ARATH4.339e-6356.19Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME44_ARATH2.154e-6256.85Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME21_SOLLC3.110e-6156.92Pectinesterase 2.1 OS=Solanum lycopersicum GN=PME2... [more]
PME16_ARATH4.061e-6158.67Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME3_SOLLC9.048e-6158.16Pectinesterase 3 OS=Solanum lycopersicum GN=PME3 P... [more]
PME36_ARATH1.182e-6055.90Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME1_FICAW1.182e-6056.92Pectinesterase/pectinesterase inhibitor OS=Ficus a... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06L22_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06L22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835141 ID=CF835141; Name=CF835141; organism=Citrus sinensis; type=EST; length=707bp
TTTTTTTTTTCTTTTTGACAATAAAAGAGAGAGTCAGCTACATTTATTTT
TTGAATAAATCATTAGAAAGTTATACACTAAACACAAATGAATGAGATGA
GATTTAGTTACCACCGCTAACAACTAATCCTCCACAAAAAGGAATATCAG
TATCAGGCAACCAAGTGTCTCCCATGGTGAAATTGTAAACTGTAAAATTC
AGAGCCTGTGAAGCATTCATGAGACTGTAACCGGGCCACTTCACTCTCAT
TGTAGTATTAGCTCCAGGGCCATAATTCCGAAACTCACCATAATACAAAG
TATCCAACCCAACCGTTCCATTCCATTCAAGCCACCCAACAGGACTTATC
AAATCTCCAATGTAAGATTGCATGTAAACTGTCCTGGAAAATTCTTTCCA
GGGCCTGCCCAGATAGTTTAATGTCGTCGCCGTGGAGTTCAAGTCCTTGG
CAAAATCTGGGGCAGCAACAATGGAGCAATTTTGTATGGCAATGCCAGTG
TTCTGATTGGGATCAGTTCTTCCCTGAGCTGTTACCGCATTCTTCTGATT
CGGCATCGGTTTTCGAGCGTATATGTTACAGTTCTGGAAGACTGCAGCTG
CATTGCCAAATATGAAATCAACGGTGCCATAAATGTCACATTCTCTGTAA
AATTGCCTTAGTGAATGGACATAAAGAGTGTCTTGGTAGCCTTCAAAACT
GCAACGG
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