CF835141

Overview
NameCF835141
Unique NameCF835141
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length707
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835141 vs. ExPASy Swiss-Prot
Match: PME6_ARATH (Probable pectinesterase/pectinesterase inhibitor 6 OS=Arabidopsis thaliana GN=PME6 PE=2 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 6.069e-57
Identity = 103/194 (53.09%), Postives = 133/194 (68.56%), Query Frame = -2
Query:  125 CSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVFQNCNIYARKPMPNQKNAVTAQGRTDPNQNTGIAIQNCSIVAAPDFAKDLNSTATTLNYLGRPWKEFSRTVYMQSYIGDLISPVGWLEWNGTVGLDTLYYGEFRNYGPGANTTMRVKWPGYSLM-NASQALNFTVYNFTMGDTWLPDTDIPFCGGL 703
            CSF+GYQDTLY+HS RQF R C+IYGTVDFIFG+A A+ QNCNIYARKPM  QKN +TAQ R +P++ TG  IQ+ ++  A +             YLGRPW+  SRTV+M+  +G L+SP GWL W+G+  L TLYYGE+ N G GA+ + RVKWPGY ++   ++A  FTV NF  G+ W+  T +P   GL
Sbjct:  373 CSFKGYQDTLYLHSSRQFLRNCNIYGTVDFIFGDATAILQNCNIYARKPMSGQKNTITAQSRKEPDETTGFVIQSSTVATASE------------TYLGRPWRSHSRTVFMKCNLGALVSPAGWLPWSGSFALSTLYYGEYGNTGAGASVSGRVKWPGYHVIKTVTEAEKFTVENFLDGNYWITATGVPVNDGL 554          
BLAST of CF835141 vs. ExPASy Swiss-Prot
Match: PME24_ARATH (Putative pectinesterase/pectinesterase inhibitor 24 OS=Arabidopsis thaliana GN=PME24 PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.352e-56
Identity = 103/194 (53.09%), Postives = 125/194 (64.43%), Query Frame = -2
Query:  125 RCSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVFQNCNIYARKPMPNQKNAVTAQGRTDPNQNTGIAIQNCSIVAAPDFAKDLNSTATTLNYLGRPWKEFSRTVYMQSYIGDLISPVGWLEWNGTVGLDTLYYGEFRNYGPGANTTMRVKWPGYSLMNASQALNFTVYNFTMGDTWLPDTDIPFCGGL 706
            RC+   YQDTLYVH+ RQFYREC I GTVDFIFGN+A+V Q+C I  R+PM  Q+N +TAQGRTDPN NTGI+I  C+I         L      + +LGRPWK FS TV M SY+   I   GWL W G    DT++YGE++N GPGA+T  RVKW G   ++  +A  FTV  F  G  WLP T +PF  GL
Sbjct:  375 RCTMNAYQDTLYVHAQRQFYRECTIIGTVDFIFGNSASVLQSCRILPRRPMKGQQNTITAQGRTDPNMNTGISIHRCNI-------SPLGDLTDVMTFLGRPWKNFSTTVIMDSYLHGFIDRKGWLPWTGDSAPDTIFYGEYKNTGPGASTKNRVKWKGLRFLSTKEANRFTVKPFIDGGRWLPATKVPFRSGL 561          
BLAST of CF835141 vs. ExPASy Swiss-Prot
Match: PME3_CITSI (Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 3.934e-56
Identity = 113/194 (58.25%), Postives = 131/194 (67.53%), Query Frame = -2
Query:  125 CSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVFQNCNIYARKPMPNQKNAVTAQGRTDPNQNTGIAIQNCSIVAAPDFAKDLNSTATTLNYLGRPWKEFSRTVYMQSYIGDLISPVGWLEWNGTVGLDTLYYGEFRNYGPGANTTMRVKWPGYSLM-NASQALNFTVYNFTMGDTWLPDTDIPFCGGL 703
            C    YQDTLYVHS RQF+  C I GTVDFIFGNAAAV QNC+I+ARKP   QKN VTAQGR DPNQNTGI IQ   I A  D      S  T   YLGRPWKE+SRTV MQS I D+I P GW EW+G   L+TL+YGE +N G GA T+ RVKW G+ ++ +A++A  FT  +F  G +WL  T  PF  GL
Sbjct:  394 CDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPT---YLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 584          
BLAST of CF835141 vs. ExPASy Swiss-Prot
Match: PME_DAUCA (Pectinesterase OS=Daucus carota PE=1 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 1.952e-55
Identity = 110/195 (56.41%), Postives = 132/195 (67.69%), Query Frame = -2
Query:  125 RCSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVFQNCNIYARKPMPNQKNAVTAQGRTDPNQNTGIAIQNCSIVAAPDFAKDLNSTATTLNYLGRPWKEFSRTVYMQSYIGDLISPVGWLEWNGTVGLDTLYYGEFRNYGPGANTTMRVKWPGYSLMNAS-QALNFTVYNFTMGDTWLPDTDIPFCGGL 706
            RC    YQD+LYVHS RQF+  C I GTVDFIFGNAA V Q+C+I+AR+P   QKN VTAQGRTDPNQNTGI IQ   I A  D     +S  T   YLGRPWKE+SRTV MQS I ++I+P GW  W+G   LDTLYYGE++N G GA T+ RV W G+ ++ +S +A  FT  +F  G +WL  T  PF  GL
Sbjct:  128 RCDILAYQDSLYVHSNRQFFINCFIAGTVDFIFGNAAVVLQDCDIHARRPGSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLQPVQSSFPT---YLGRPWKEYSRTVVMQSSITNVINPAGWFPWDGNFALDTLYYGEYQNTGAGAATSGRVTWKGFKVITSSTEAQGFTPGSFIAGGSWLKATTFPFSLGL 319          
BLAST of CF835141 vs. ExPASy Swiss-Prot
Match: PME3_PHAVU (Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=2 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 4.349e-55
Identity = 107/192 (55.73%), Postives = 132/192 (68.75%), Query Frame = -2
Query:  137 RCSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVFQNCNIYARKPMPNQKNAVTAQGRTDPNQNTGIAIQNCSIVAAPDFAKDLNSTATTLNYLGRPWKEFSRTVYMQSYIGDLISPVGWLEWNGTV-GLDTLYYGEFRNYGPGANTTMRVKWPGYS-LMNASQALNFTVYNFTMGDTWLPDTDIPF 706
            RCSF+G+QDTLY HS RQFYR+CDI GT+DFIFGNAA VFQ+C I  R+P+PNQ N +TAQG+ DPNQNTGI IQ  +I    +     N TA T  YLGRPWK+FS TV MQS IG L++PVGW+ W   V    T++Y E++N GPGA+ + RVKW GY   +    A  FTV +F  G  WLP+  + F
Sbjct:  393 RCSFDGFQDTLYAHSNRQFYRDCDITGTIDFIFGNAAVVFQSCKIMPRQPLPNQFNTITAQGKKDPNQNTGIIIQKSTITPFGN-----NLTAPT--YLGRPWKDFSTTVIMQSDIGALLNPVGWMSWVPNVEPPTTIFYAEYQNSGPGADVSQRVKWAGYKPTITDRNAEEFTVQSFIQGPEWLPNAAVQF 577          
BLAST of CF835141 vs. ExPASy Swiss-Prot
Match: PME2_ARATH (Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 PE=2 SV=2)

HSP 1 Score: 214.157 bits (544), Expect = 5.680e-55
Identity = 110/191 (57.59%), Postives = 127/191 (66.49%), Query Frame = -2
Query:  137 RCSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVFQNCNIYARKPMPNQKNAVTAQGRTDPNQNTGIAIQNCSIVAAPDFAKDLNSTATTLNYLGRPWKEFSRTVYMQSYIGDLISPVGWLEWNGTVGLDTLYYGEFRNYGPGANTTMRVKWPGYSLMNA-SQALNFTVYNFTMGDTWLPDTDIPF 706
            +C    YQDTLYVHS RQF+ +C I GTVDFIFGNAAAV Q+C+I AR+P   QKN VTAQGR+DPNQNTGI IQNC I    D    L    T   YLGRPWKE+SRTV MQS I D+I P GW EW+G+  LDTL Y E+ N G GA T  RVKW GY ++ + ++A  FT   F  G  WL  T  PF
Sbjct:  396 QCDMFAYQDTLYVHSNRQFFVKCHITGTVDFIFGNAAAVLQDCDINARRPNSGQKNMVTAQGRSDPNQNTGIVIQNCRIGGTSDL---LAVKGTFPTYLGRPWKEYSRTVIMQSDISDVIRPEGWHEWSGSFALDTLTYREYLNRGGGAGTANRVKWKGYKVITSDTEAQPFTAGQFIGGGGWLASTGFPF 583          
BLAST of CF835141 vs. ExPASy Swiss-Prot
Match: PME3_ARATH (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2)

HSP 1 Score: 213.772 bits (543), Expect = 7.419e-55
Identity = 110/194 (56.70%), Postives = 127/194 (65.46%), Query Frame = -2
Query:  125 CSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVFQNCNIYARKPMPNQKNAVTAQGRTDPNQNTGIAIQNCSIVAAPDFAKDLNSTATTLNYLGRPWKEFSRTVYMQSYIGDLISPVGWLEWNGTVGLDTLYYGEFRNYGPGANTTMRVKWPGYSLMN-ASQALNFTVYNFTMGDTWLPDTDIPFCGGL 703
            C    YQDTLYVHS RQF+ +C I GTVDFIFGNAA V Q+C+I+AR+P   QKN VTAQGRTDPNQNTGI IQ C I A  D      S  T   YLGRPWKE+S+TV MQS I D+I P GW EW GT  L+TL Y E+ N G GA T  RVKW G+ ++  A++A  +T   F  G  WL  T  PF  GL
Sbjct:  402 CDMLAYQDTLYVHSNRQFFVKCLIAGTVDFIFGNAAVVLQDCDIHARRPNSGQKNMVTAQGRTDPNQNTGIVIQKCRIGATSDLQSVKGSFPT---YLGRPWKEYSQTVIMQSAISDVIRPEGWSEWTGTFALNTLTYREYSNTGAGAGTANRVKWRGFKVITAAAEAQKYTAGQFIGGGGWLSSTGFPFSLGL 592          
BLAST of CF835141 vs. ExPASy Swiss-Prot
Match: PME38_ARATH (Putative pectinesterase/pectinesterase inhibitor 38 OS=Arabidopsis thaliana GN=PME38 PE=2 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 7.419e-55
Identity = 104/191 (54.45%), Postives = 129/191 (67.54%), Query Frame = -2
Query:  137 RCSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVFQNCNIYARKPMPNQKNAVTAQGRTDPNQNTGIAIQNCSIVAAPDFAKDLNSTATTLNYLGRPWKEFSRTVYMQSYIGDLISPVGWLEWNGTVGLDTLYYGEFRNYGPGANTTMRVKWPGYSLM-NASQALNFTVYNFTMGDTWLPDTDIPF 706
            RCS EGYQDTLYVHS RQF+RECDIYGTVDFIFGNAAAV QNC I+AR P PN  N +TAQ R +PNQ TGI I N  +  AP     L    T   YLGRPW+ ++RTV + +Y+  LI P GW++W+    L TLYYGE++N GPG+ T  RV W G+ ++ +  +A  FT+  F    +WLP T +PF
Sbjct:  286 RCSIEGYQDTLYVHSGRQFFRECDIYGTVDFIFGNAAAVLQNCRIFARNP-PNGVNTITAQSRFNPNQTTGIVIHNSVVKGAP--GVQLGGVKT---YLGRPWRSYARTVVIGTYLDTLIEPNGWIDWDNVTALSTLYYGEYQNSGPGSGTENRVDWAGFHVISDIQEAREFTLPKFIDSASWLPPTKVPF 470          
BLAST of CF835141 vs. ExPASy Swiss-Prot
Match: PME21_ARATH (Probable pectinesterase/pectinesterase inhibitor 21 OS=Arabidopsis thaliana GN=PME21 PE=2 SV=2)

HSP 1 Score: 213.772 bits (543), Expect = 7.419e-55
Identity = 95/194 (48.97%), Postives = 124/194 (63.92%), Query Frame = -2
Query:  122 CSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVFQNCNIYARKPMPNQKNAVTAQGRTDPNQNTGIAIQNCSIVAAPDFAKDLNSTATTLNYLGRPWKEFSRTVYMQSYIGDLISPVGWLEWNGTVGLDTLYYGEFRNYGPGANTTMRVKWPGYSLMNASQALNFTVYNFTMGDTWLPDTDIPFCGGLV 703
            C F+GYQDTLY HS RQF+R+C I GT+DF+FG+AAAVFQNC +  RKP+PNQ   +TA GR DP ++TG   Q C+I   PD+   L    T+  YLGRPWKE+SRT+ M ++I D + P GW  W G  GL TL+Y E +N GPG+    RV W G   ++    L FT   +  GD W+P   +P+  GL+
Sbjct:  376 CRFDGYQDTLYTHSHRQFFRDCTISGTIDFLFGDAAAVFQNCTLLVRKPLPNQACPITAHGRKDPRESTGFVFQGCTIAGEPDY---LAVKETSKAYLGRPWKEYSRTIIMNTFIPDFVQPQGWQPWLGDFGLKTLFYSEVQNTGPGSALANRVTWAGIKTLSEEDILKFTPAQYIQGDDWIPGKGVPYTTGLL 566          
BLAST of CF835141 vs. ExPASy Swiss-Prot
Match: PME18_ARATH (Pectinesterase/pectinesterase inhibitor 18 OS=Arabidopsis thaliana GN=PME18 PE=1 SV=2)

HSP 1 Score: 213.386 bits (542), Expect = 9.689e-55
Identity = 104/191 (54.45%), Postives = 127/191 (66.49%), Query Frame = -2
Query:  137 RCSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVFQNCNIYARKPMPNQKNAVTAQGRTDPNQNTGIAIQNCSIVAAPDFAKDLNSTATTLNYLGRPWKEFSRTVYMQSYIGDLISPVGWLEWNGTVGLDTLYYGEFRNYGPGANTTMRVKWPGYSLM-NASQALNFTVYNFTMGDTWLPDTDIPF 706
            RC  + YQDTLY H+LRQFYR+  I GTVDFIFGN+A VFQNC+I AR P   QKN +TAQGR D NQNT I+IQ C I A+ D A    S  T   +LGRPWK +SRTV MQS+I + I P GW  W+G   L TLYYGE+ N GPGA+T+ RV W G+ ++ ++ +A  FTV     G  WL  T + F
Sbjct:  366 RCRIDAYQDTLYTHTLRQFYRDSYITGTVDFIFGNSAVVFQNCDIVARNPGAGQKNMLTAQGREDQNQNTAISIQKCKITASSDLAPVKGSVKT---FLGRPWKLYSRTVIMQSFIDNHIDPAGWFPWDGEFALSTLYYGEYANTGPGADTSKRVNWKGFKVIKDSKEAEQFTVAKLIQGGLWLKPTGVTF 553          
The following BLAST results are available for this feature:
BLAST of CF835141 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
PME6_ARATH6.069e-5753.09Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME24_ARATH1.352e-5653.09Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME3_CITSI3.934e-5658.25Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1[more]
PME_DAUCA1.952e-5556.41Pectinesterase OS=Daucus carota PE=1 SV=1[more]
PME3_PHAVU4.349e-5555.73Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=... [more]
PME2_ARATH5.680e-5557.59Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 P... [more]
PME3_ARATH7.419e-5556.70Pectinesterase/pectinesterase inhibitor 3 OS=Arabi... [more]
PME38_ARATH7.419e-5554.45Putative pectinesterase/pectinesterase inhibitor 3... [more]
PME21_ARATH7.419e-5548.97Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME18_ARATH9.689e-5554.45Pectinesterase/pectinesterase inhibitor 18 OS=Arab... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06L22_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06L22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835141 ID=CF835141; Name=CF835141; organism=Citrus sinensis; type=EST; length=707bp
TTTTTTTTTTCTTTTTGACAATAAAAGAGAGAGTCAGCTACATTTATTTT
TTGAATAAATCATTAGAAAGTTATACACTAAACACAAATGAATGAGATGA
GATTTAGTTACCACCGCTAACAACTAATCCTCCACAAAAAGGAATATCAG
TATCAGGCAACCAAGTGTCTCCCATGGTGAAATTGTAAACTGTAAAATTC
AGAGCCTGTGAAGCATTCATGAGACTGTAACCGGGCCACTTCACTCTCAT
TGTAGTATTAGCTCCAGGGCCATAATTCCGAAACTCACCATAATACAAAG
TATCCAACCCAACCGTTCCATTCCATTCAAGCCACCCAACAGGACTTATC
AAATCTCCAATGTAAGATTGCATGTAAACTGTCCTGGAAAATTCTTTCCA
GGGCCTGCCCAGATAGTTTAATGTCGTCGCCGTGGAGTTCAAGTCCTTGG
CAAAATCTGGGGCAGCAACAATGGAGCAATTTTGTATGGCAATGCCAGTG
TTCTGATTGGGATCAGTTCTTCCCTGAGCTGTTACCGCATTCTTCTGATT
CGGCATCGGTTTTCGAGCGTATATGTTACAGTTCTGGAAGACTGCAGCTG
CATTGCCAAATATGAAATCAACGGTGCCATAAATGTCACATTCTCTGTAA
AATTGCCTTAGTGAATGGACATAAAGAGTGTCTTGGTAGCCTTCAAAACT
GCAACGG
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