CF835141

Overview
NameCF835141
Unique NameCF835141
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length707
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835141 vs. ExPASy Swiss-Prot
Match: PME62_ARATH (Pectinesterase QRT1 OS=Arabidopsis thaliana GN=QRT1 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.733e-23
Identity = 60/178 (33.71%), Postives = 88/178 (49.44%), Query Frame = -2
Query:  158 GYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVFQNCNIYARKPMPNQKNAVTAQGRTDPNQNTGIAIQNCSIVAAPDFAKDLNSTATTLNYLGRPWKEFSRTVYMQSYIGDLISPVGWLEWNGTVGLDTLYYGEFRNYGPGANTTMRVKWPGYSLMNASQALNFTVYNFTMGDTWL 691
            G QDTL+  +   ++ +C I G VDFIFGNA +++Q+C+I++      +  A+ A  R    ++TG +  NC I            + T   YLGR W  +SRTVY   +I D+I+PVGW +W        + +GE+   G GA    RV W     +   +   F    F  GD WL
Sbjct:  218 GSQDTLFDDNGSHYFYQCYIQGNVDFIFGNAKSLYQDCDIHSTA---KRYGAIAAHHRDSETEDTGFSFVNCDI------------SGTGQIYLGRAWGNYSRTVYSNCFIADIITPVGWSDWKHPERQRKVMFGEYNCRGRGAERGGRVPWS--KTLTRDEVKPFLGREFIYGDQWL 378          
BLAST of CF835141 vs. ExPASy Swiss-Prot
Match: PME55_ARATH (Probable pectinesterase 55 OS=Arabidopsis thaliana GN=PME55 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.780e-23
Identity = 61/187 (32.62%), Postives = 90/187 (48.13%), Query Frame = -2
Query:  143 FEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVFQNC--NIYARKPMPNQKNAVTAQGRTDPNQNTGIAIQNCSIVAAPDFAKDLNSTATTLNYLGRPWKEFSRTVYMQSYIGDLISPVGWLEWNGTVGLDTLYYGEFRNYGPGANTTMRVKWPGYSLMNASQALNFTVYNFTMGDTWLPDTDI 697
            F G QDTL+    R ++  C I G VDFI G+  +++Q+C   +   +  P     +TAQGRT+ N   G    NC +     F K          YLGR W+ +SR ++  S + D++ P+GW EWN       L Y E   +G G+NT+ R KW     ++AS   +    +F     W+ D  I
Sbjct:  156 FAGIQDTLWDSDGRHYFHRCTIQGAVDFILGSGQSIYQSCVIQVLGGQLGPGVTGYITAQGRTNANDANGFVFINCLVHG---FGKA---------YLGRAWRPYSRVIFYNSNLTDVVDPLGWWEWNYQGYEKQLTYAEHGCFGSGSNTSRRAKW--VKKLSASAVQHLADLSFINRGGWVEDLPI 328          
BLAST of CF835141 vs. ExPASy Swiss-Prot
Match: PME31_ARATH (Pectinesterase 31 OS=Arabidopsis thaliana GN=PME31 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.780e-23
Identity = 54/156 (34.62%), Postives = 83/156 (53.21%), Query Frame = -2
Query:  236 CSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVFQNCNIYARKPMPNQKNAVTAQGRTDPNQNTGIAIQNCSIVAAPDFAKDLNSTATTLNYLGRPWKEFSRTVYMQSYIGDLISPVGWLEWNGTVGLDTLYYGEFRNYGPGANTTMRVKW 703
            C F G+QDTLY+H  +Q+ ++C I G+VDFIFGN+ A+ ++C+I+ +      +  +TAQ R    ++TG     C I           +  +   YLGRPW  F R V   +Y+   I  VGW  W       +  + E+R +GPG+ ++ RV W
Sbjct:  137 CRFLGWQDTLYLHHGKQYLKDCYIEGSVDFIFGNSTALLEHCHIHCK-----SQGFITAQSRKSSQESTGYVFLRCVIT---------GNGQSGYMYLGRPWGPFGRVVLAYTYMDACIRNVGWHNWGNAENERSACFYEYRCFGPGSCSSERVPW 278          
BLAST of CF835141 vs. ExPASy Swiss-Prot
Match: PME68_ARATH (Probable pectinesterase 68 OS=Arabidopsis thaliana GN=PME68 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.279e-22
Identity = 58/187 (31.02%), Postives = 94/187 (50.27%), Query Frame = -2
Query:  146 CSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVFQNCNIYARKPMPNQKNAVTAQGRTDPNQNTGIAIQNCSIVAAPDFAKDLNSTATTLNYLGRPWKEFSRTVYMQSYIGDLISPVGWLEWNGTVGLD-TLYYGEFRNYGPGANTTMRVKWPGYSLMNASQALNFTVYNFTMGDTWLPDTD 703
            C F G QDTL   + R +++EC I G++DFIFGN  +++++C +++   + ++  ++ A GRT P + TG A   C +            T T   Y+GR   ++SR VY  +Y   L++  GW +W+       T ++G +  YGPGA  T  V W     ++   A  F   +F  G  W+   D
Sbjct:  192 CGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHS---IASRFGSIAAHGRTCPEEKTGFAFVGCRV------------TGTGPLYVGRAMGQYSRIVYAYTYFDALVAHGGWDDWDHKSNKSKTAFFGVYNCYGPGAAATRGVSWA--RALDYESAHPFIAKSFVNGRHWIAPRD 361          
BLAST of CF835141 vs. ExPASy Swiss-Prot
Match: PME50_ARATH (Probable pectinesterase 50 OS=Arabidopsis thaliana GN=PME50 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.543e-20
Identity = 58/183 (31.69%), Postives = 92/183 (50.27%), Query Frame = -2
Query:  158 CSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVFQNCNIYARKPMPNQKNAVTAQGRTDPNQNTGIAIQNCSIVAAPDFAKDLNSTATTLNYLGRPWKEFSRTVYMQSYIGDLISPVGWLEWNGTVGLD-TLYYGEFRNYGPGANTTMRVKWPGYSLMNASQALNFTVYNFTMGDTWL 703
            C F G+QDTL       F+++C I GT DFIFG  A+++ N  ++A   + +    +TAQGR    +  G    +C +            T T + YLGR W    + VY  + +  +++P GW E N   G D T++YGE++ +GPG++   RV  P    ++ ++   F    +  G TWL
Sbjct:  190 CRFHGFQDTLCDDKGNHFFKDCYIEGTYDFIFGRGASLYLNTQLHA---VGDGLRVITAQGRQSATEQNGYTFVHCKV----------TGTGTGI-YLGRSWMSHPKVVYAFTEMTSVVNPSGWRE-NLNRGYDKTVFYGEYKCFGPGSHLEKRV--PYTQDIDKNEVTPFLTLGYIKGSTWL 355          
BLAST of CF835141 vs. ExPASy Swiss-Prot
Match: PME67_ARATH (Probable pectinesterase 67 OS=Arabidopsis thaliana GN=PME67 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.933e-20
Identity = 53/186 (28.49%), Postives = 87/186 (46.77%), Query Frame = -2
Query:  155 CSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVFQNCNIYA---RKPMPNQKNAVTAQGRTDPNQNTGIAIQNCSIVAAPDFAKDLNSTATTLNYLGRPWKEFSRTVYMQSYIGDLISPVGWLEWNGTVGLDTLYYGEFRNYGPGANTTMRVKWPGYSLMNASQALNFTVYNFTMGDTWLP 703
            C+F    +TL+ +  R +Y EC I G++DFIFG A ++F NC I+    ++  P    ++TA  R    + TG       +    +             YLGR    +SR ++ ++Y+   + P GW  W+       LY+GE++ +GPGA    R  W     +   +  +F   +F  G +WLP
Sbjct:  168 CAFYSLHNTLFDNKGRHYYHECYIQGSIDFIFGRATSIFNNCEIFVISDKRVKPY--GSITAHHRESAEEKTGYVFIRGKVYGIDEV------------YLGRAKGPYSRVIFAKTYLSKTVVPDGWTNWSYHGSTQNLYHGEYKCHGPGAERQKRSDWA--KDLTKQEVESFLSIDFIDGTSWLP 337          
BLAST of CF835141 vs. ExPASy Swiss-Prot
Match: PME_ASPAC (Pectinesterase OS=Aspergillus aculeatus GN=pme1 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.461e-18
Identity = 59/153 (38.56%), Postives = 85/153 (55.56%), Query Frame = -2
Query:  251 CSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFG-NAAAVFQNCNIYARKPMPNQKNAVTAQGRTDPNQNTGIAIQNCSIVAAPDFAKDLNSTATTLNYLGRPWKEFSRTVYMQSYIGDLISPVGWLEWN-GTVGLDTLYYGEFRNYGPGANTT 703
            C+F GYQDTL   +  Q Y    I G VDFIFG +A A FQN +I  R        ++TA GR+    +T   + N S VAA    K+ +  A    YLGRPW E++R V+ Q+ + ++I+ +GW EW+  T   + + +GE+ N G G+  T
Sbjct:  155 CNFTGYQDTLLAQTGNQLYINSYIEGAVDFIFGQHARAWFQNVDI--RVVEGPTSASITANGRSSET-DTSYYVINKSTVAA----KEGDDVAEGTYYLGRPWSEYARVVFQQTSMTNVINSLGWTEWSTSTPNTEYVTFGEYANTGAGSEGT 300          
BLAST of CF835141 vs. ExPASy Swiss-Prot
Match: PME66_ARATH (Probable pectinesterase 66 OS=Arabidopsis thaliana GN=PME66 PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 4.701e-17
Identity = 58/197 (29.44%), Postives = 87/197 (44.16%), Query Frame = -2
Query:  128 SFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVFQNCN------IYARKPMPNQKNAVTAQGRTDPNQNTGIAIQNCSIVAAPDFAKDLNSTATTLNYLGRPWKEFSRTVYMQSYIGDLISPVGWLEWNGTVGLDTLYYGEFRNYGPGANTTMRVKWPGYSLMNASQALNFTVYNFTMGDTWLPDTDIPFCGG 700
            SF G QDTL+    R +Y+ C I G +DFIFG   ++F+ C       IYA     N    +TA  R  P+   G    +C++            T      LGR W   +R ++ +S + D++ P+GW  W        L + E    G GA+T+ RV W     ++ S+   F   +F   D W+  +  P  GG
Sbjct:  158 SFVGLQDTLFDGKGRHYYKRCIISGGIDFIFGYGQSLFKECTLNMTLGIYAPD---NPYGTITAHQRPSPSDEGGFVFSDCTV------------TGVGKTLLGRAWGSNARVIFDRSRLSDVVLPIGWDAWRAKGNERDLTFVEAGCTGAGADTSQRVPW--LKKLSLSEVDGFASVSFIDQDGWI--SRFPIEGG 335          
BLAST of CF835141 vs. ExPASy Swiss-Prot
Match: PME_ASPTU (Pectinesterase OS=Aspergillus tubingensis GN=pme1 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.140e-17
Identity = 51/150 (34.00%), Postives = 81/150 (54.00%), Query Frame = -2
Query:  260 CSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFG-NAAAVFQNCNIYARKPMPNQKNAVTAQGRTDPNQNTGIAIQNCSIVAAPDFAKDLNSTATTLNYLGRPWKEFSRTVYMQSYIGDLISPVGWLEWN-GTVGLDTLYYGEFRNYGPGA 703
            C F GYQDTL   +  Q Y    I G VDFIFG +A A F  C+I   +   +   ++TA GR+  + ++   I   ++ AA     D N  ++   YLGRPW +++R  + ++ + D+I+ +GW EW+  T   + + + E+ N G GA
Sbjct:  154 CQFTGYQDTLLAETGYQVYAGTYIEGAVDFIFGQHARAWFHECDIRVLEGPSSA--SITANGRSSESDDSYYVIHKSTVAAA-----DGNDVSSGTYYLGRPWSQYARVCFQKTSMTDVINHLGWTEWSTSTPNTENVTFVEYGNTGTGA 296          
BLAST of CF835141 vs. ExPASy Swiss-Prot
Match: PME52_ARATH (Putative pectinesterase 52 OS=Arabidopsis thaliana GN=PME52 PE=2 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 6.140e-17
Identity = 53/185 (28.65%), Postives = 89/185 (48.11%), Query Frame = -2
Query:  158 CSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVFQNCNIYARKPMPNQK---NAVTAQGRTDPNQNTGIAIQNCSIVAAPDFAKDLNSTATTLNYLGRPWKEFSRTVYMQSYIGDLISPVGWLEWNGTVGLDTLYYGEFRNYGPGANTTMRVKWPGYSLMNASQALNFTVYNFTMGDTWL 703
            C F G QDT++ +  R  ++ C I G +DFIFG+  +V+++C+I A       K     +TAQGR+  +  +G      S+            + +T  YLGR +  FSR +++Q+ +  ++ P GW  W+      +  Y E    G G++ + RV W    L +      F++ NF   D W+
Sbjct:  116 CDFLGLQDTVWDNLGRHHFKNCYIEGAIDFIFGSGQSVYEDCHINATAGALASKVSFGYITAQGRSSDSDPSGFVFLRGSV------------SGSTSVYLGRAYGPFSRVIFIQTDLSSVVHPEGWYSWHYGGYEMSFTYAEVECKGAGSDMSRRVPWID-KLHSFYTKQQFSISNFIDQDQWI 287          
The following BLAST results are available for this feature:
BLAST of CF835141 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
PME62_ARATH5.733e-2333.71Pectinesterase QRT1 OS=Arabidopsis thaliana GN=QRT... [more]
PME55_ARATH9.780e-2332.62Probable pectinesterase 55 OS=Arabidopsis thaliana... [more]
PME31_ARATH9.780e-2334.62Pectinesterase 31 OS=Arabidopsis thaliana GN=PME31... [more]
PME68_ARATH8.279e-2231.02Probable pectinesterase 68 OS=Arabidopsis thaliana... [more]
PME50_ARATH4.543e-2031.69Probable pectinesterase 50 OS=Arabidopsis thaliana... [more]
PME67_ARATH5.933e-2028.49Probable pectinesterase 67 OS=Arabidopsis thaliana... [more]
PME_ASPAC1.461e-1838.56Pectinesterase OS=Aspergillus aculeatus GN=pme1 PE... [more]
PME66_ARATH4.701e-1729.44Probable pectinesterase 66 OS=Arabidopsis thaliana... [more]
PME_ASPTU6.140e-1734.00Pectinesterase OS=Aspergillus tubingensis GN=pme1 ... [more]
PME52_ARATH6.140e-1728.65Putative pectinesterase 52 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06L22_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06L22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835141 ID=CF835141; Name=CF835141; organism=Citrus sinensis; type=EST; length=707bp
TTTTTTTTTTCTTTTTGACAATAAAAGAGAGAGTCAGCTACATTTATTTT
TTGAATAAATCATTAGAAAGTTATACACTAAACACAAATGAATGAGATGA
GATTTAGTTACCACCGCTAACAACTAATCCTCCACAAAAAGGAATATCAG
TATCAGGCAACCAAGTGTCTCCCATGGTGAAATTGTAAACTGTAAAATTC
AGAGCCTGTGAAGCATTCATGAGACTGTAACCGGGCCACTTCACTCTCAT
TGTAGTATTAGCTCCAGGGCCATAATTCCGAAACTCACCATAATACAAAG
TATCCAACCCAACCGTTCCATTCCATTCAAGCCACCCAACAGGACTTATC
AAATCTCCAATGTAAGATTGCATGTAAACTGTCCTGGAAAATTCTTTCCA
GGGCCTGCCCAGATAGTTTAATGTCGTCGCCGTGGAGTTCAAGTCCTTGG
CAAAATCTGGGGCAGCAACAATGGAGCAATTTTGTATGGCAATGCCAGTG
TTCTGATTGGGATCAGTTCTTCCCTGAGCTGTTACCGCATTCTTCTGATT
CGGCATCGGTTTTCGAGCGTATATGTTACAGTTCTGGAAGACTGCAGCTG
CATTGCCAAATATGAAATCAACGGTGCCATAAATGTCACATTCTCTGTAA
AATTGCCTTAGTGAATGGACATAAAGAGTGTCTTGGTAGCCTTCAAAACT
GCAACGG
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