CF835142
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835142 vs. ExPASy Swiss-Prot
Match: RL2_SULIY (50S ribosomal protein L2P OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=rpl2p PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 3.496e-25 Identity = 56/95 (58.95%), Postives = 66/95 (69.47%), Query Frame = -2 Query: 170 DTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 454 D +KLPS K + + RA +G VAGGG EKPLLKAG Y K++VK WP VRGVAMN V+HPHGGG HQ + STV R+APPG+KVG I Sbjct: 133 DKVLIKLPSDKIKAVSNKARATVGVVAGGGVVEKPLLKAGANYWKYKVKAKKWPIVRGVAMNVVDHPHGGGLHQSVSRPSTVSRNAPPGRKVGHI 227
BLAST of CF835142 vs. ExPASy Swiss-Prot
Match: RL2_SULIN (50S ribosomal protein L2P OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=rpl2p PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 3.496e-25 Identity = 56/95 (58.95%), Postives = 66/95 (69.47%), Query Frame = -2 Query: 170 DTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 454 D +KLPS K + + RA +G VAGGG EKPLLKAG Y K++VK WP VRGVAMN V+HPHGGG HQ + STV R+APPG+KVG I Sbjct: 133 DKVLIKLPSDKIKAVSNKARATVGVVAGGGVVEKPLLKAGANYWKYKVKAKKWPIVRGVAMNVVDHPHGGGLHQSVSRPSTVSRNAPPGRKVGHI 227
BLAST of CF835142 vs. ExPASy Swiss-Prot
Match: RL2_SULIM (50S ribosomal protein L2P OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=rpl2p PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 3.496e-25 Identity = 56/95 (58.95%), Postives = 66/95 (69.47%), Query Frame = -2 Query: 170 DTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 454 D +KLPS K + + RA +G VAGGG EKPLLKAG Y K++VK WP VRGVAMN V+HPHGGG HQ + STV R+APPG+KVG I Sbjct: 133 DKVLIKLPSDKIKAVSNKARATVGVVAGGGVVEKPLLKAGANYWKYKVKAKKWPIVRGVAMNVVDHPHGGGLHQSVSRPSTVSRNAPPGRKVGHI 227
BLAST of CF835142 vs. ExPASy Swiss-Prot
Match: RL2_SULIL (50S ribosomal protein L2P OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=rpl2p PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 3.496e-25 Identity = 56/95 (58.95%), Postives = 66/95 (69.47%), Query Frame = -2 Query: 170 DTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 454 D +KLPS K + + RA +G VAGGG EKPLLKAG Y K++VK WP VRGVAMN V+HPHGGG HQ + STV R+APPG+KVG I Sbjct: 133 DKVLIKLPSDKIKAVSNKARATVGVVAGGGVVEKPLLKAGANYWKYKVKAKKWPIVRGVAMNVVDHPHGGGLHQSVSRPSTVSRNAPPGRKVGHI 227
BLAST of CF835142 vs. ExPASy Swiss-Prot
Match: RL2_SULIK (50S ribosomal protein L2P OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=rpl2p PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 3.496e-25 Identity = 56/95 (58.95%), Postives = 66/95 (69.47%), Query Frame = -2 Query: 170 DTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 454 D +KLPS K + + RA +G VAGGG EKPLLKAG Y K++VK WP VRGVAMN V+HPHGGG HQ + STV R+APPG+KVG I Sbjct: 133 DKVLIKLPSDKIKAVSNKARATVGVVAGGGVVEKPLLKAGANYWKYKVKAKKWPIVRGVAMNVVDHPHGGGLHQSVSRPSTVSRNAPPGRKVGHI 227
BLAST of CF835142 vs. ExPASy Swiss-Prot
Match: RL2_SULIA (50S ribosomal protein L2P OS=Sulfolobus islandicus (strain M.16.27) GN=rpl2p PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 3.496e-25 Identity = 56/95 (58.95%), Postives = 66/95 (69.47%), Query Frame = -2 Query: 170 DTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 454 D +KLPS K + + RA +G VAGGG EKPLLKAG Y K++VK WP VRGVAMN V+HPHGGG HQ + STV R+APPG+KVG I Sbjct: 133 DKVLIKLPSDKIKAVSNKARATVGVVAGGGVVEKPLLKAGANYWKYKVKAKKWPIVRGVAMNVVDHPHGGGLHQSVSRPSTVSRNAPPGRKVGHI 227
BLAST of CF835142 vs. ExPASy Swiss-Prot
Match: RL2_KORCO (50S ribosomal protein L2P OS=Korarchaeum cryptofilum (strain OPF8) GN=rpl2p PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 3.496e-25 Identity = 56/103 (54.37%), Postives = 69/103 (66.99%), Query Frame = -2 Query: 170 IISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 478 + SH + D ++LPS +K++ + CRA IG VAG GR EKP +KAG Y+ R WP VRGVAMNPV HPHGGG+H+ G +TV R APPGQKVG I Sbjct: 129 VFSH--EGDKVILRLPSRKEKLVDARCRATIGVVAGSGRIEKPFMKAGIKYYHERTHPKRWPVVRGVAMNPVSHPHGGGSHKRPGKPTTVARTAPPGQKVGHI 229
BLAST of CF835142 vs. ExPASy Swiss-Prot
Match: RL2_UNCMA (50S ribosomal protein L2P OS=Uncultured methanogenic archaeon RC-I GN=rpl2p PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.017e-24 Identity = 56/103 (54.37%), Postives = 69/103 (66.99%), Query Frame = -2 Query: 170 IISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 478 I++H + T V++PSG K + CRA IG VAGGGRTEKP ++AGN ++K K WP VRGVAMN V+HP GGG QH G TV R+ PPG+KVG I Sbjct: 129 IVAH--EGKKTVVQMPSGEIKRLNPKCRATIGVVAGGGRTEKPFVRAGNKWYKMANKATKWPVVRGVAMNAVDHPFGGGGRQHPGRPKTVSRNTPPGRKVGSI 229
BLAST of CF835142 vs. ExPASy Swiss-Prot
Match: RL2_SULSO (50S ribosomal protein L2P OS=Sulfolobus solfataricus GN=rpl2p PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.328e-24 Identity = 55/95 (57.89%), Postives = 66/95 (69.47%), Query Frame = -2 Query: 170 DTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 454 D ++LPS K + + RA +G VAGGG EKPLLKAG Y K++VK WP VRGVAMN V+HPHGGG HQ + STV R+APPG+KVG I Sbjct: 133 DRVLIRLPSDKIKAVSNKARATVGIVAGGGVIEKPLLKAGANYWKYKVKAKKWPIVRGVAMNVVDHPHGGGLHQSVSRPSTVSRNAPPGRKVGHI 227
BLAST of CF835142 vs. ExPASy Swiss-Prot
Match: RL2_METBF (50S ribosomal protein L2P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rpl2p PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.328e-24 Identity = 53/103 (51.46%), Postives = 74/103 (71.84%), Query Frame = -2 Query: 170 IISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 478 +++H +++ T V +PSG K + CRA++G VAGGGR ++P LKAG YHK + + +P+V GVAMNPV+HP GGG +H G +TV R+APPG+KVGLI Sbjct: 129 VVTH--ESNRTAVAMPSGNIKWLNPKCRAVVGIVAGGGRVDRPWLKAGKKYHKMKTRAAKYPRVSGVAMNPVDHPFGGGAWKHPGKPTTVSRNAPPGRKVGLI 229 The following BLAST results are available for this feature:
BLAST of CF835142 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 94
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835142 ID=CF835142; Name=CF835142; organism=Citrus sinensis; type=EST; length=479bpback to top |