CF835143
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RL2_STAMF (50S ribosomal protein L2P OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rpl2p PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 7.407e-45 Identity = 97/211 (45.97%), Postives = 126/211 (59.72%), Query Frame = 1 Query: 4 MGPLIRAQRKGAGS-VFLSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 633 MG I QR G G+ F S +H R GPA++ L +KG + +++HDPGR PLA++ ++ A EGMY GQ + G A + GN+LP+ IPEG + N+E GD G R+SG YA+I+ T+V+LPSG +P+ RA IG +AGGGR EKPLLKAGNAYHK++VK WPKVRGVAMN V HP Sbjct: 1 MGKRILPQRMGRGTPTFRSPSHRRVGPAKYPPLKLDRT---IKGKIIDLLHDPGRWVPLAKIVLEDGTTFLTP-----AVEGMYVGQIIEIGPDAHISNGNILPIGKIPEGTQIANIEKRPGDGGKFVRSSGTYALIVGRA--GTKTQVQLPSGKIIEVPNNARATIGVIAGGGRDEKPLLKAGNAYHKWKVKAKKWPKVRGVAMNAVSHP 201
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RL2_METVS (50S ribosomal protein L2P OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rpl2p PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 7.407e-45 Identity = 97/211 (45.97%), Postives = 130/211 (61.61%), Query Frame = 1 Query: 4 MGPLIRAQRKGAGSV-FLSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 633 MG + +Q +G G+ + S +H RKG ++RS D E+ G + G V +++HDPGR AP+A+V F + ++ L + EG+ G+ + CG A + GNVLP+ IPEG V N+E GD G L RA G YA +++H D T VKLPSG K++ CRA IG VAGGGR EKP +KAG +H K WPKVRGVAMN V+HP Sbjct: 1 MGKRLISQNRGRGTPKYRSPSHKRKGEVKYRSYDEMEKVGKVLGTVIDVLHDPGRSAPVAKVRFANG-----EERLVLIPEGISVGEQIECGISAEIKPGNVLPLGEIPEGIPVYNIETIPGDGGKLVRAGGCYAHVVAH--DIGKTIVKLPSGYAKVLNPACRATIGVVAGGGRKEKPFVKAGKKHHSLSAKAVAWPKVRGVAMNAVDHP 204
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RL2_METVA (50S ribosomal protein L2P OS=Methanococcus vannielii GN=rpl2p PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 7.407e-45 Identity = 97/211 (45.97%), Postives = 130/211 (61.61%), Query Frame = 1 Query: 4 MGPLIRAQRKGAGSV-FLSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 633 MG + +Q +G G+ + S +H RKG ++RS D E+ G + G V +++HDPGR AP+A+V F + ++ L + EG+ G+ + CG A + GNVLP+ IPEG V N+E GD G L RA G YA +++H D T VKLPSG K++ CRA IG VAGGGR EKP +KAG +H K WPKVRGVAMN V+HP Sbjct: 1 MGKRLISQNRGRGTPKYRSPSHKRKGEVKYRSYDEMEKVGKVLGTVIDVLHDPGRSAPVAKVRFANG-----EERLVLIPEGISVGEQIECGISAEIKPGNVLPLGEIPEGIPVYNIETIPGDGGKLVRAGGCYAHVVAH--DIGKTIVKLPSGYAKVLNPACRATIGVVAGGGRKEKPFVKAGKKHHSLSAKAVAWPKVRGVAMNAVDHP 204
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RL2_PYRFU (50S ribosomal protein L2P OS=Pyrococcus furiosus GN=rpl2p PE=3 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 1.650e-44 Identity = 99/211 (46.92%), Postives = 128/211 (60.66%), Query Frame = 1 Query: 4 MGPLIRAQRKGAGS-VFLSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 633 MG + QR+G GS F S +H +G ++ L++ + L+GVV EI+HDPGR AP+ARV F + ++L IA EG+ GQ +Y G A + VGN LP+ IPEG V N+E GD G RA G YA+++S PD V+LPSG K CRA IG VAGGGR EKPL+KAG AY+K++ + WP RGV MN V HP Sbjct: 1 MGKSLIQQRRGKGSPTFKSPSHRFRGAVKYIPLNYTQEKT-LRGVVEEIMHDPGRTAPVARVKFENGI-----EKLIIAPEGLLVGQEIYIGPDAPIAVGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAGGTYALVVSREPDK--VIVQLPSGELKAFNPMCRATIGVVAGGGRLEKPLVKAGKAYYKYKARNKFWPTPRGVKMNAVNHP 203
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RL2_META3 (50S ribosomal protein L2P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rpl2p PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 4.801e-44 Identity = 94/211 (44.55%), Postives = 127/211 (60.19%), Query Frame = 1 Query: 4 MGPLIRAQRKGAGSV-FLSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 633 MG +++Q +G G+ + S TH RKG ++R D ER + G + +I+HDPGR +P+ARV + + ++ L + EGM + CG A + GNVLP+ +PEG V N+E GD G L R+ G YA +I+H D T +KLPSG K + CRA IG VAGGGR EKP+ KAG YH + K WP+VRGVAMN V+HP Sbjct: 1 MGKRLQSQNRGKGTPRYTSPTHKRKGAVKYRKFDESERKDKIIGTIIDILHDPGRSSPIARVRYDNG-----EERLILIPEGMKIKDTIECGISAEIKPGNVLPLGEVPEGIPVYNIETIPGDGGKLVRSGGCYAHVITH--DVSKTIIKLPSGHMKTLNPMCRATIGVVAGGGRKEKPITKAGKKYHAMKAKAVLWPRVRGVAMNAVDHP 204
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RL2_PYRAB (50S ribosomal protein L2P OS=Pyrococcus abyssi GN=rpl2p PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 6.270e-44 Identity = 97/211 (45.97%), Postives = 129/211 (61.14%), Query Frame = 1 Query: 4 MGPLIRAQRKGAGS-VFLSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 633 MG + QR+G GS F S +H +G ++ L++ + + L+GVV EI+HDPGR AP+ARV F + ++L IA EG+ GQ +Y G A + +GN LP+ IPEG V N+E GD G RA G YA+++S + D V+LPSG K CRA IG VAGGGR EKPL+KAG AY+K++ + WP RGV MN V HP Sbjct: 1 MGKSLIQQRRGKGSPTFRSPSHRFRGAVKYIPLNYTQ-DKTLRGVVEEIMHDPGRTAPVARVRFENGM-----EKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAGGTYALVVSR--EKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYKYKARNRFWPTPRGVKMNAVNHP 203
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RL2_PYRHO (50S ribosomal protein L2P OS=Pyrococcus horikoshii GN=rpl2p PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 1.824e-43 Identity = 95/211 (45.02%), Postives = 129/211 (61.14%), Query Frame = 1 Query: 4 MGPLIRAQRKGAGS-VFLSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 633 MG + QR+G GS F S +H +G ++ L++ + + ++GVV EI+HDPGR AP+ARV F + ++L IA EG+ GQ +Y G A + +GN LP+ IPEG + N+E GD G RA G YA+++S + D V+LPSG K CRA IG VAGGGR EKPL+KAG AY+K++ + WP RGV MN V HP Sbjct: 1 MGKSLIQQRRGKGSPTFRSPSHRFRGAVKYIPLNYTQ-DKTIRGVVEEIMHDPGRTAPVARVKFENGM-----EKLIIAPEGLLVGQEIYIGPDAPVEIGNTLPLAKIPEGTYIYNIEGVPGDGGKYVRAGGTYALVVSR--EKDKVIVQLPSGELKAFDPNCRATIGVVAGGGRLEKPLVKAGKAYYKYKARNKFWPTPRGVKMNAVNHP 203
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RL2_METTH (50S ribosomal protein L2P OS=Methanobacterium thermoautotrophicum GN=rpl2p PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 2.383e-43 Identity = 97/211 (45.97%), Postives = 128/211 (60.66%), Query Frame = 1 Query: 4 MGPLIRAQRKGAGS-VFLSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 633 MG + +QR+G G+ + S +H KG ++R+ D E G LKG V +I+HDPGR AP+ARV F + ++ L +A E + + V CG KA + GN LP+ IPEG + N+E+ GD G L R+SG YA +I+H D D ++LPSG K + CRA +G VAGGGR EKP LKAG YH R K VRGVAMN V+HP Sbjct: 1 MGKRLISQRRGRGTPTYRSASHRFKGKIKYRAYDSIESEGSLKGKVVDIMHDPGRTAPVARVKFENG-----EERLILAPEALMLNEEVECGVKARVKPGNSLPLSEIPEGTPIYNIENRPGDGGKLVRSSGTYASLITH--DADKAVIELPSGELKALNPQCRATVGVVAGGGRREKPFLKAGKKYHALRAKGKKSVTVRGVAMNAVDHP 204
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RL2_HALSA (50S ribosomal protein L2P OS=Halobacterium salinarium GN=rpl2p PE=3 SV=3) HSP 1 Score: 173.711 bits (439), Expect = 6.933e-43 Identity = 97/211 (45.97%), Postives = 124/211 (58.77%), Query Frame = 1 Query: 4 MGPLIRAQRKGAG-SVFLSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 633 MG I+ QR+G G S F + +H K + E L G V ++ HDP R AP+ARV F + L +A+EG+ G + G AT+ GN LP+ IPEG VCNVE H GD G ARA G A +++H + D T V+LPSG K + CRA IG VAGGGRTEKP +KAGN +HK + + WP+VRGVAMN V+HP Sbjct: 1 MGRRIQGQRRGRGTSTFRAPSHRYKAELSHKRT---EDTDVLAGEVIDVEHDPARSAPVARVAFEDD-----DQRLVLASEGVGVGDTIEIGISATIEEGNTLPLAEIPEGVPVCNVESHPGDGGKFARAGGVNADLVTH--ERDATIVELPSGETKRLSPDCRATIGVVAGGGRTEKPFVKAGNKHHKMKARGTKWPRVRGVAMNAVDHP 201
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RL2_HALS3 (50S ribosomal protein L2P OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=rpl2p PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 6.933e-43 Identity = 97/211 (45.97%), Postives = 124/211 (58.77%), Query Frame = 1 Query: 4 MGPLIRAQRKGAG-SVFLSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 633 MG I+ QR+G G S F + +H K + E L G V ++ HDP R AP+ARV F + L +A+EG+ G + G AT+ GN LP+ IPEG VCNVE H GD G ARA G A +++H + D T V+LPSG K + CRA IG VAGGGRTEKP +KAGN +HK + + WP+VRGVAMN V+HP Sbjct: 1 MGRRIQGQRRGRGTSTFRAPSHRYKAELSHKRT---EDTDVLAGEVIDVEHDPARSAPVARVAFEDD-----DQRLVLASEGVGVGDTIEIGISATIEEGNTLPLAEIPEGVPVCNVESHPGDGGKFARAGGVNADLVTH--ERDATIVELPSGETKRLSPDCRATIGVVAGGGRTEKPFVKAGNKHHKMKARGTKWPRVRGVAMNAVDHP 201 The following BLAST results are available for this feature:
BLAST of CF835143 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835143 ID=CF835143; Name=CF835143; organism=Citrus sinensis; type=EST; length=633bpback to top |