CF835143
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RL2_MOOTA (50S ribosomal protein L2 OS=Moorella thermoacetica (strain ATCC 39073) GN=rplB PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.191e-18 Identity = 65/191 (34.03%), Postives = 96/191 (50.26%), Query Frame = 1 Query: 67 HRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 633 HR G + +R +DF + G VA I +DP R A +A + + +K +A E + G V G +A + VGN LP+ IP G +V NVE G G +AR++G A +++ + ++LPSG + + CRA +GQV G + + G A K + P VRGV MNPV+HP Sbjct: 53 HRGGGHKRLYRVIDFKRDKDGIPGRVATIEYDPNRSANIALINYADG-----EKRYILAPENLQVGDQVISGPEADIKVGNALPLSQIPVGTMVHNVELKPGKGGQMARSAGAGAQLMA--KEGGYALLRLPSGEVRKVQESCRATVGQV---GNLDWENINIGKAGRKRWL--GIRPTVRGVVMNPVDHP 231
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RL2_MICAN (50S ribosomal protein L2 OS=Microcystis aeruginosa (strain NIES-843) GN=rplB PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.191e-18 Identity = 65/193 (33.68%), Postives = 93/193 (48.19%), Query Frame = 1 Query: 61 THHRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 633 + HR G + +R +DF + VA I +DP R A +A + ++ +K IA G+ G V G+ A VGN LP+ IP G V N+E G G + RA+G +A +++ + D ++LPS ++I C A IG+V L KAG H R P VRG MNPV+HP Sbjct: 51 SRHRGGGHKRLYRIIDFRRDKRDIPAKVAAIEYDPNRNARIALLFYKDG-----EKRYIIAPAGLGVGDTVIAGENAPFEVGNALPLSRIPLGTEVHNIELVPGRGGQMVRAAGGFAQVVA--KEGDYVTIRLPSKEVRMIRRECYATIGKVGNAEARNISLGKAGRTRH-----RGQRPHVRGSVMNPVDHP 231
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RL2_METEP (50S ribosomal protein L2 OS=Methylobacterium extorquens (strain PA1) GN=rplB PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.191e-18 Identity = 63/186 (33.87%), Postives = 94/186 (50.54%), Query Frame = 1 Query: 91 RSLDFGER-NGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHP 633 R++DF R N + V I +DP R A +A +TF ++ +A + + G V G+ + GN P+ S+P G +V NVE +G G +AR++G+YA I+ D ++L SG ++++ C A +G V+ L KAG RN W P VRGVAMNPV+HP Sbjct: 63 RNVDFKRRENLNVPATVERIEYDPNRTAFIALITFPDG-----KQSYILAPQRLSPGDKVIAGESVDVKPGNAAPIGSMPVGTIVHNVELKIGKGGAIARSAGNYAQIVGR--DQGYVTLRLNSGEQRLVHGQCFATVGAVSNPDHMNISLGKAG---------RNRWLGKRPHVRGVAMNPVDHP 232
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RL2_METC4 (50S ribosomal protein L2 OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=rplB PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.191e-18 Identity = 63/186 (33.87%), Postives = 94/186 (50.54%), Query Frame = 1 Query: 91 RSLDFGER-NGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHP 633 R++DF R N + V I +DP R A +A +TF ++ +A + + G V G+ + GN P+ S+P G +V NVE +G G +AR++G+YA I+ D ++L SG ++++ C A +G V+ L KAG RN W P VRGVAMNPV+HP Sbjct: 63 RNVDFKRRENLNVPATVERIEYDPNRTAFIALITFPDG-----KQSYILAPQRLSPGDKVIAGESVDVKPGNAAPIGSMPVGTIVHNVELKIGKGGAIARSAGNYAQIVGR--DQGYVTLRLNSGEQRLVHGQCFATVGAVSNPDHMNISLGKAG---------RNRWLGKRPHVRGVAMNPVDHP 232
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RL2_MESFL (50S ribosomal protein L2 OS=Mesoplasma florum GN=rplB PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.191e-18 Identity = 65/208 (31.25%), Postives = 100/208 (48.08%), Query Frame = 1 Query: 28 RKGAGSVFLSHTHHRKG--PAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHP 633 + G + L T H+ G ++R +DF + G +A I +DP R A + V + +K + A+GM G + + A + VGN P+++IPEG ++ NVE G G +AR++G I+ + D ++L SG + + + C A IG+V G E L+ G A RN W P VRG MNP +HP Sbjct: 41 KAGRNNRGLITTRHKGGGHKQKYRIIDFKRNKRDVVGTIATIEYDPNRNAFICLVNYLDG-----EKRYILFAKGMTVGMKIVASEHADIKVGNAAPLKNIPEGTLIHNVELKPGKGGQMARSAGTSVQILGKDDDGKYVTLRLTSGEVRKVLADCYATIGEV---GNEEYNLVNWGKA------GRNRWRGIRPTVRGSVMNPNDHP 234
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RL2_MACCJ (50S ribosomal protein L2 OS=Macrococcus caseolyticus (strain JCSC5402) GN=rplB PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.191e-18 Identity = 73/217 (33.64%), Postives = 107/217 (49.31%), Query Frame = 1 Query: 4 MGPLIR-AQRKGAGSVFLSHTH--HRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHP 633 + PL R A R G + + H H++ Q+R +DF + VA I +DP R A +A + + +K IA +G+ G V G +A + VGN LP+++IP G V+ N+E G G L R++G A ++ + V+L SG ++I S CRA IGQV G + L+ G A R+ W P VRG MNP +HP Sbjct: 34 LAPLPRKAGRNNQGKLTVRHRGGGHKR---QYRIIDFKRNKDGIPAKVATIEYDPNRSANIALLHYLDG-----EKRYIIAPKGLTVGTQVVNGPEADIKVGNCLPLQNIPVGTVIHNIELKPGKGGQLVRSAGASAQVL--GKEGKYVLVRLKSGEVRMILSTCRATIGQV---GNEQHELINIGKA------GRSRWKGIRPTVRGSVMNPNDHP 231
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RL2_BURP8 (50S ribosomal protein L2 OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=rplB PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.191e-18 Identity = 65/207 (31.40%), Postives = 102/207 (49.28%), Query Frame = 1 Query: 16 IRAQRKGAGSVFLSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAG-NAYHKFRVKRNCWPKVRGVAMNPVEHP 633 I + KG G H HH +R +DF + V + +DP R A +A V + ++ IA +G+ GQ + G +A + GN LP+R+IP G + +E G +AR++G A++++ + +V+L SG + + CRA IG+V + + + KAG N + R P VRGVAMNPV+HP Sbjct: 49 ITTRHKGGG-----HKHH------YRIVDFRRTKDGIPAKVERLEYDPNRSANIALVVYADG-----ERRYIIAPKGVTVGQQLMSGSEAPIRAGNTLPIRNIPVGTTIHCIEMLPGKGAQMARSAGTSAMLLAR--EGTYAQVRLRSGEIRRVHIECRATIGEVGNEEHSLRQIGKAGANRWRGIR------PTVRGVAMNPVDHP 231
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RL2_BUCAT (50S ribosomal protein L2 OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7) GN=rplB PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.191e-18 Identity = 58/182 (31.87%), Postives = 93/182 (51.10%), Query Frame = 1 Query: 88 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 633 +R +DF + V +DP R + +A + ++ +++ +A +G+ G + G +A + GN LP+++IP G V NVE G G +AR++G Y +++ D + ++L SG + S CRA IG+V K L KAG A ++ P VRG AMNPV+HP Sbjct: 62 YRIVDFKRNKDDIGATVERFEYDPNRSSNIALILYKDG-----ERKYILAPKGIKIGDTIISGLRAPIKTGNTLPLKNIPVGTFVHNVELKPGKGGQIARSAGSYVQLVAF--DEEYATLRLRSGEMRKTQSNCRATIGEVGNSEHMLKVLGKAG-ASRWIGIR----PTVRGTAMNPVDHP 231
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RL2_BUCAI (50S ribosomal protein L2 OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=rplB PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.191e-18 Identity = 58/182 (31.87%), Postives = 93/182 (51.10%), Query Frame = 1 Query: 88 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 633 +R +DF + V +DP R + +A + ++ +++ +A +G+ G + G +A + GN LP+++IP G V NVE G G +AR++G Y +++ D + ++L SG + S CRA IG+V K L KAG A ++ P VRG AMNPV+HP Sbjct: 62 YRIVDFKRNKDDIGATVERFEYDPNRSSNIALILYKDG-----ERKYILAPKGIKIGDTIISGLRAPIKTGNTLPLKNIPVGTFVHNVELKPGKGGQIARSAGSYVQLVAF--DEEYATLRLRSGEMRKTQSNCRATIGEVGNSEHMLKVLGKAG-ASRWIGIR----PTVRGTAMNPVDHP 231
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RL2_BUCA5 (50S ribosomal protein L2 OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A) GN=rplB PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.191e-18 Identity = 58/182 (31.87%), Postives = 93/182 (51.10%), Query Frame = 1 Query: 88 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 633 +R +DF + V +DP R + +A + ++ +++ +A +G+ G + G +A + GN LP+++IP G V NVE G G +AR++G Y +++ D + ++L SG + S CRA IG+V K L KAG A ++ P VRG AMNPV+HP Sbjct: 62 YRIVDFKRNKDDIGATVERFEYDPNRSSNIALILYKDG-----ERKYILAPKGIKIGDTIISGLRAPIKTGNTLPLKNIPVGTFVHNVELKPGKGGQIARSAGSYVQLVAF--DEEYATLRLRSGEMRKTQSNCRATIGEVGNSEHMLKVLGKAG-ASRWIGIR----PTVRGTAMNPVDHP 231 The following BLAST results are available for this feature:
BLAST of CF835143 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835143 ID=CF835143; Name=CF835143; organism=Citrus sinensis; type=EST; length=633bpback to top |