CF835143
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RL2_LACLA (50S ribosomal protein L2 OS=Lactococcus lactis subsp. lactis GN=rplB PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.555e-18 Identity = 66/204 (32.35%), Postives = 98/204 (48.04%), Query Frame = 1 Query: 22 AQRKGAGSVFLSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 633 A R G + + H H ++R +DF + VA I +DP R A +A + + + K +A +G+ G V G +A + VGN LP+ +IP G ++ N+E G G L R++G A ++ + T V+L SG ++I S CRA IG V ++ L KAG H P VRG MNP +HP Sbjct: 41 AGRNNTGRITVRH-HGGGHKRKYRVIDFKRTTDNVVAKVATIEYDPNRTANIALIVYSNGV-----KSYILAPKGLEVGMTVVSGPEADIKVGNALPLANIPVGTLIHNIELKPGKGGQLVRSAGASAQVL--GSEGKYTLVRLQSGEVRMILSTCRATIGVVGNEQQSLINLGKAGRTRH-----MGIRPTVRGSVMNPNDHP 231
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RL2_EHRCR (50S ribosomal protein L2 OS=Ehrlichia chaffeensis (strain Arkansas) GN=rplB PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.555e-18 Identity = 70/209 (33.49%), Postives = 101/209 (48.33%), Query Frame = 1 Query: 19 RAQRKGAGSVFLSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHP 633 R R G + + H R +R +DF + V + +DP R A +A +++ +K IA G+ G V G A ++ GN L ++SIP G V NVE G+ GV+AR++G YA ++S D ++L SG + + S CRA IG V+ L KAG R+ W P VRGVAMNP++HP Sbjct: 40 RGGRNSRGVITVRH-RGRGHKRLYRVVDFKRNKVGVSATVERLEYDPNRTAFIALLSYDDG-----EKSYIIAPNGLKKGDVVISGDGADILPGNCLLLKSIPVGTFVHNVELRPGNGGVIARSAGTYAQLMS--KDGMYVLLRLSSGEIRKVLSDCRATIGIVSNLDNQNVKLGKAG---------RSRWLGIRPTVRGVAMNPIDHP 231
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RL2_DESHY (50S ribosomal protein L2 OS=Desulfitobacterium hafniense (strain Y51) GN=rplB PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.555e-18 Identity = 69/212 (32.55%), Postives = 99/212 (46.70%), Query Frame = 1 Query: 19 RAQRKGAGSVFLSHT---HHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHP 633 +A R G + + H H RK +R +DF + VA I +DP R A +A + + K +A G+ GQ V G A + VGN LP+++IP G ++ N+E G L R++G A +++ T R LPSG +++ CRA IGQV G E + G A R+ W P VRG MNP +HP Sbjct: 40 KAGRNNQGKLTVRHQGGGHKRK----YRLIDFKRNKDSVPAKVASIEYDPNRSANIALLHYLDG-----HKAYILAPNGLQVGQMVVSGPDADIKVGNALPIKNIPVGTLLHNIEMKPGKGAQLVRSAGGSAQLMAKEGKYATLR--LPSGEMRMVHIDCRATIGQV---GNLEHENINIGKA------GRSRWLGIRPTVRGAVMNPNDHP 231
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RL2_DESHD (50S ribosomal protein L2 OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=rplB PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.555e-18 Identity = 69/212 (32.55%), Postives = 99/212 (46.70%), Query Frame = 1 Query: 19 RAQRKGAGSVFLSHT---HHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHP 633 +A R G + + H H RK +R +DF + VA I +DP R A +A + + K +A G+ GQ V G A + VGN LP+++IP G ++ N+E G L R++G A +++ T R LPSG +++ CRA IGQV G E + G A R+ W P VRG MNP +HP Sbjct: 40 KAGRNNQGKLTVRHQGGGHKRK----YRLIDFKRNKDSVPAKVASIEYDPNRSANIALLHYLDG-----HKAYILAPNGLQVGQMVVSGPDADIKVGNALPIKNIPVGTLLHNIEMKPGKGAQLVRSAGGSAQLMAKEGKYATLR--LPSGEMRMVHIDCRATIGQV---GNLEHENINIGKA------GRSRWLGIRPTVRGAVMNPNDHP 231
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RL2_ACIAC (50S ribosomal protein L2 OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=rplB PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.555e-18 Identity = 67/208 (32.21%), Postives = 101/208 (48.56%), Query Frame = 1 Query: 16 IRAQRKGAGSVFLSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKR--NCWPKVRGVAMNPVEHP 633 I + KG G H HH +R +DF + V I +DP R A +A V + ++ IA + G + G +A + VGN LP+R+IP G+ + +E G +AR++G A +++ + +V++ SG + I CRA IG+VA + + L KAG VKR P VRGVAMNP++HP Sbjct: 49 ITTRHKGGG-----HKHH------YRVVDFKRNKDAIPAKVERIEYDPNRTAHIALVCYADG-----ERRYIIAPRNLEVGATIVSGSEAPIRVGNTLPIRNIPVGSTIHCIELKPGAGAQIARSAGTSATLLAR--EGTYAQVRMRSGEVRRIHIECRATIGEVANEEHSLRQLGKAG-------VKRWMGIRPTVRGVAMNPIDHP 231
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RK2_PEA (50S ribosomal protein L2, chloroplastic OS=Pisum sativum GN=rpl2 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.555e-18 Identity = 62/191 (32.46%), Postives = 96/191 (50.26%), Query Frame = 1 Query: 67 HRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 633 HR G + +R +DF + G + I +DP R A + + Y ++ +I G + G + + +GN LP+ +P G + N+E +G G LARA+G A +I+ + + +KLPSG ++I C A +GQV G +K L + G ++R KR P VRGV MNPV+HP Sbjct: 51 HRGGGHKRLYRKIDFRRNEKDIYGRIITIEYDPNRNAHICLI------HYGDGEKRYILHPKAIIGDTIVYGTEVPIKMGNALPLTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIA--KEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRVG--AKRWRGKR---PVVRGVVMNPVDHP 228
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RK2_CYAPA (50S ribosomal protein L2, cyanelle OS=Cyanophora paradoxa GN=rpl2 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.555e-18 Identity = 64/212 (30.19%), Postives = 104/212 (49.06%), Query Frame = 1 Query: 16 IRAQRKGAGSVFLSHTHHRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHP 633 ++ ++KG + + T H+ G ++ +R +DF + VA I +DP R A +A + +++ +K + A G+ G VY G A + VGN LP+ IP + N+E G G L R++G A +++ + + ++LPSG + + C A IGQ+ + + KAG RN W P VRGV NPV+HP Sbjct: 36 LKHRKKGRNNRGIITTAHKGGGSKRLYRIIDFKRDLKLVPAKVAAIEYDPNRNARIALLHYQNG-----EKGYILHARGLAVGNMVYSGPNAPIEVGNSLPLSEIPLATEIHNIELTPGKGGQLVRSAGSSAQLLA--KEGNYVTLRLPSGEMRFVRKECYATIGQIGNAEISNISIGKAG---------RNRWLGIRPTVRGVVKNPVDHP 231
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RM02_RECAM (60S ribosomal protein L2, mitochondrial OS=Reclinomonas americana GN=RPL2 PE=3 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 2.031e-18 Identity = 66/213 (30.99%), Postives = 110/213 (51.64%), Query Frame = 1 Query: 4 MGPLIRAQRKGAGSVFLSHTHHRKG--PAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFR-HPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 633 +G + A R G + + +HR G ++R +DF N + G+V + +DP R +A + + F Y+ +A + G V G + +GN LP+R+IP G ++ N+E + G G + R++G A +IS + +N +KLPSG ++ P+ A IG ++ + KAG + ++ +R P VRGVAMNPV+HP Sbjct: 35 VGMIESAGRNNTGRITV---YHRGGGHKTKYRYIDFKRSNYNIPGIVERLEYDPNRTCFIALIKDNENNFSYI------LAPHDLKVGDTVITGNDIDIRIGNTLPLRNIPIGTMIHNIELNPGKGGKIVRSAGSSAQLISKD-ENGFCMLKLPSGEYRLFPNNSLATIGILSNIDNKNIKIGKAGRS--RWMGRR---PIVRGVAMNPVDHP 232
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RL2_SHEFN (50S ribosomal protein L2 OS=Shewanella frigidimarina (strain NCIMB 400) GN=rplB PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.031e-18 Identity = 64/204 (31.37%), Postives = 98/204 (48.04%), Query Frame = 1 Query: 28 RKGAGSVFLSHTH--HRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 633 R G + + H H++ +R +DF + V + +DP R A +A V + ++ +AA+GM G + G A + GN P+R+IP G+VV VE G +AR++G Y +++ D ++L SG + +P CRA G+V + L KAG + R P VRGVAMNPV+HP Sbjct: 43 RNNTGRITVRHVGGGHKQ---HYRIVDFKRNKDGIPAKVERLEYDPNRTAHIALVLYADG-----ERRYILAAKGMKAGDPIQSGLDAEIKTGNARPLRNIPVGSVVHAVEMKPGKGAQIARSAGAYVQVVAR--DGAYATLRLRSGEMRKVPVDCRATFGEVGNAEHMLRQLGKAG-----AKRWRGVRPTVRGVAMNPVDHP 231
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RL2_RICM5 (50S ribosomal protein L2 OS=Rickettsia massiliae (strain Mtu5) GN=rplB PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.031e-18 Identity = 62/195 (31.79%), Postives = 97/195 (49.74%), Query Frame = 1 Query: 67 HRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHP 633 HR G + +R +DF + +V I +DP R A +A + + + +A + + G V + A + +GN LP++ IP G + NVE VG G +AR++G ++ D+ ++KL SG +++P C+A IG ++ + L KAG RN W P VRGVAMNPV+HP Sbjct: 53 HRGGGHKKLYRIIDFKRNKIDISAIVERIEYDPNRTAFIALIKYEDG-----EYSYILAPQKLSVGNRVISSQDADIKIGNCLPLKCIPIGTTLHNVEMQVGKGGQIARSAGTSVDLV--GKDSGYAQIKLRSGEFRLVPLDCKATIGSISNPDQKNINLGKAG---------RNRWLGWRPHVRGVAMNPVDHP 231 The following BLAST results are available for this feature:
BLAST of CF835143 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835143 ID=CF835143; Name=CF835143; organism=Citrus sinensis; type=EST; length=633bpback to top |