CF835143
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RL2_PYRIL (50S ribosomal protein L2P OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rpl2p PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.036e-38 Identity = 89/211 (42.18%), Postives = 120/211 (56.87%), Query Frame = 1 Query: 4 MGPLIRAQRKG-AGSVFLSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 633 MG I QR+G GS F S + R GP ++ L+ GY V EI+H+PG AP+AR+ + ++ AAEG+Y GQ + G A GN++ + +PEG +V NVE GD G ARA G YAV++ P+ + T ++LPSG + S RA +G VAGGGR EKP LKAG YH+ + K +P VRG AM+P HP Sbjct: 1 MGKRILVQRRGRGGSQFRSPSWKRDGPVRYPPLNVTVGRGY----VVEILHEPGLNAPVARIRLENGVEFLN-----FAAEGLYVGQEIEVGDLAAPKTGNIVILGRVPEGTMVFNVEKRAGDGGKFARAGGTYAVVVGQKPEENKTIIRLPSGKVVEVDSRGRATVGIVAGGGRIEKPFLKAGKKYHRAKAKAWKYPTVRGKAMSPYAHP 202
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RL2_THEPD (50S ribosomal protein L2P OS=Thermofilum pendens (strain Hrk 5) GN=rpl2p PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.308e-38 Identity = 92/212 (43.40%), Postives = 128/212 (60.38%), Query Frame = 1 Query: 4 MGPLIRAQRKG-AGSVFLSHTHHRKGPAQFRSLDFGE-RNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 633 MG + QR+G GSVF + R GPA++ + E +N L GVV +++H+PGRGAPLA V F K I EG+ GQ +Y G KA ++G+++ + ++PEG +V N+E GD G LAR+SG YA++++H+ N T ++LPS K + S RA IG VA GGR EKP+LKAG +H R K +P VRG AM+ HP Sbjct: 1 MGKRLLVQRRGRGGSVFRNPGWKRLGPARYPPYNPEEFKNKVLVGVVKDLLHEPGRGAPLALVEFEDG-----TKMYMIPPEGLAVGQKIYYGAKAPAVLGSIVEIGNVPEGTIVSNIEIRPGDGGKLARSSGAYALVLAHS--NGKTLIQLPSKKVKEVSSEARATIGMVAAGGRIEKPMLKAGKMWHWSRAKSFKYPTVRGKAMSAYAHP 205
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RL2_THEON (50S ribosomal protein L2P OS=Thermococcus onnurineus (strain NA1) GN=rpl2p PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.308e-38 Identity = 90/211 (42.65%), Postives = 124/211 (58.77%), Query Frame = 1 Query: 4 MGPLIRAQRKGAGSV-FLSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 633 MG + QR+G G+ F + +H +G ++ L+ + L G V EI+HDPGR AP+ARV F + ++L IA EG+ G+ + G A + +GN LP+ IPEG+ V ++E GD G RA G YA+++S + D V+LPSG K CRA IG VAGGGR EKP++KAG AY+ + + WPK RGV MN V HP Sbjct: 1 MGKSLIQQRRGKGTTTFRAPSHRYRGAVRYVPLNLTKEKT-LVGKVVEILHDPGRTAPVARVKFENGM-----EKLIIAPEGILVGEEIAIGPNAPIKIGNTLPLAMIPEGSYVYDIEGTPGDGGKYVRAGGVYALVVSR--EKDKVIVQLPSGELKQFNPMCRATIGVVAGGGRLEKPIVKAGKAYYIAKARNRFWPKPRGVKMNAVNHP 203
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RL2_METBF (50S ribosomal protein L2P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rpl2p PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.145e-37 Identity = 81/211 (38.39%), Postives = 125/211 (59.24%), Query Frame = 1 Query: 4 MGPLIRAQRKGAGS-VFLSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 633 MG I +Q +G G+ + + +H K + +D N ++G V + HDP R AP+A+V F ++ L +A+EG+ G + CG A + GN++P+ +PEG +CN+E D G R+SG YA +++H +++ T V +PSG K + CRA++G VAGGGR ++P LKAG YHK + + +P+V GVAMNPV+HP Sbjct: 1 MGKRIISQNRGRGTPTYRAPSHKYKAELRHPRVD---ENTSIQGKVINLEHDPARSAPIAKVVFE-----TGEERLLLASEGIAVGSTIECGDDADVRPGNIVPIGKVPEGFFICNIESKPNDGGRFVRSSGVYATVVTH--ESNRTAVAMPSGNIKWLNPKCRAVVGIVAGGGRVDRPWLKAGKKYHKMKTRAAKYPRVSGVAMNPVDHP 201
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RL2_METMA (50S ribosomal protein L2P OS=Methanosarcina mazei GN=rpl2p PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.552e-37 Identity = 83/212 (39.15%), Postives = 125/212 (58.96%), Query Frame = 1 Query: 4 MGPLIRAQRKGAGS-VFLSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFI-AAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 633 MG + +Q +G G+ + + +H K + +D N L+G V +I HDP R AP+A+V F + +ELF+ A+EG+ G + CG A + GN++P+ ++PEG +CN+E D G R+SG YA +++H P T V +PSG K + CRA++G VAGGGR ++P LKAG YHK + + +P+V VAMNP +HP Sbjct: 1 MGKRLISQNRGRGTPTYRAPSHKYKADLRHPRVD---ENTSLQGEVIDIEHDPARSAPIAKVAFENG------EELFLLASEGVAVGNIIECGDDAEVKPGNIVPIGNVPEGFFICNIESKPNDGGKFVRSSGVYATVVTHEPTR--TAVSMPSGNIKWLNPKCRAVVGIVAGGGRVDRPWLKAGKKYHKMKTRAAKYPRVSAVAMNPRDHP 201
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RL2_THENV (50S ribosomal protein L2P OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=rpl2p PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 5.685e-37 Identity = 87/211 (41.23%), Postives = 121/211 (57.35%), Query Frame = 1 Query: 4 MGPLIRAQRKG-AGSVFLSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 633 MG I QR+G GS F S + R+GP ++ L R G V +IIH PG AP+A++ + ++ AAEG+Y GQ + G+ A+ GNV+ + PEG +V NVE GD G AR+ G YAV++ P+ + T V+LPSG + + RA +G VAGGGR EKP++KAG Y++ R K +P VRG AM+P HP Sbjct: 1 MGKRILVQRRGRGGSQFRSPSWRREGPVRYPPLGTAGR-----GYVVDIIHVPGLNAPVAKIRLENGLEFLNY-----AAEGLYVGQEIEIGEAASPKTGNVVVLGKAPEGTMVFNVEKRPGDGGKFARSGGTYAVVVGQKPEENKTIVRLPSGRTMEVDARGRATVGLVAGGGRIEKPMVKAGKKYYRARAKAWKYPLVRGKAMSPYAHP 201
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RL2_CALMQ (50S ribosomal protein L2P OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rpl2p PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 7.424e-37 Identity = 88/212 (41.51%), Postives = 121/212 (57.08%), Query Frame = 1 Query: 4 MGPLIRAQRKG-AGSVFLSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFI-AAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 633 MG I QR G GS F S + R P ++ + ++G++ E++H G AP V + +E+++ A EG+Y G+ + G A + GNV+P+ IPEG +VCN+E VGD G AR+SG Y V++ H + TT V+LPSG + S RA IG VAGGGR EKP +KAGN YH+ R K +PKVRG AM+ HP Sbjct: 1 MGKKILVQRAGRGGSQFRSPSWRRIAPLRYVQFSEEQLKTTIRGIIKELVHVTGLNAPAMHVVLENG------EEMYLPAVEGVYVGKIIEFGPDAKVEPGNVMPIGKIPEGTMVCNIEKRVGDGGKYARSSGTYGVVMIHR--DSTTLVQLPSGRMIEVDSRARATIGIVAGGGRIEKPFVKAGNKYHRARTKAWKYPKVRGKAMSAYAHP 204
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RL2_SULIY (50S ribosomal protein L2P OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=rpl2p PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 8.209e-36 Identity = 86/211 (40.76%), Postives = 123/211 (58.29%), Query Frame = 1 Query: 4 MGPLIRAQRKGAGS-VFLSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 633 MG + QR G GS F S + R G ++ ++ G+L G V +I+H+PG AP+A + + +++ Q A +G+ Q + GK + + GNV+ + PEG +VCNVE + GD G AR++G YAV++ + D +KLPS K + + RA +G VAGGG EKPLLKAG Y K++VK WP VRGVAMN V+HP Sbjct: 1 MGKNLLQQRAGKGSPTFRSPSWLRIGKVRYPNIF-----GHLVGKVIDIVHNPGMNAPVAIIKLENGTKFLTQ-----AIQGLVINQKIEFGKGSPIANGNVIEIGDAPEGTIVCNVEENFGDGGKYARSAGSYAVVVGKS--GDKVLIKLPSDKIKAVSNKARATVGVVAGGGVVEKPLLKAGANYWKYKVKAKKWPIVRGVAMNVVDHP 199
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RL2_SULIM (50S ribosomal protein L2P OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=rpl2p PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 8.209e-36 Identity = 86/211 (40.76%), Postives = 123/211 (58.29%), Query Frame = 1 Query: 4 MGPLIRAQRKGAGS-VFLSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 633 MG + QR G GS F S + R G ++ ++ G+L G V +I+H+PG AP+A + + +++ Q A +G+ Q + GK + + GNV+ + PEG +VCNVE + GD G AR++G YAV++ + D +KLPS K + + RA +G VAGGG EKPLLKAG Y K++VK WP VRGVAMN V+HP Sbjct: 1 MGKNLLQQRAGKGSPTFRSPSWLRIGKVRYPNIF-----GHLVGKVIDIVHNPGMNAPVAIIKLENGTKFLTQ-----AIQGLVINQKIEFGKGSPIANGNVIEIGDAPEGTIVCNVEENFGDGGKYARSAGSYAVVVGKS--GDKVLIKLPSDKIKAVSNKARATVGVVAGGGVVEKPLLKAGANYWKYKVKAKKWPIVRGVAMNVVDHP 199
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RL2_SULIL (50S ribosomal protein L2P OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=rpl2p PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 8.209e-36 Identity = 86/211 (40.76%), Postives = 123/211 (58.29%), Query Frame = 1 Query: 4 MGPLIRAQRKGAGS-VFLSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 633 MG + QR G GS F S + R G ++ ++ G+L G V +I+H+PG AP+A + + +++ Q A +G+ Q + GK + + GNV+ + PEG +VCNVE + GD G AR++G YAV++ + D +KLPS K + + RA +G VAGGG EKPLLKAG Y K++VK WP VRGVAMN V+HP Sbjct: 1 MGKNLLQQRAGKGSPTFRSPSWLRIGKVRYPNIF-----GHLVGKVIDIVHNPGMNAPVAIIKLENGTKFLTQ-----AIQGLVINQKIEFGKGSPIANGNVIEIGDAPEGTIVCNVEENFGDGGKYARSAGSYAVVVGKS--GDKVLIKLPSDKIKAVSNKARATVGVVAGGGVVEKPLLKAGANYWKYKVKAKKWPIVRGVAMNVVDHP 199 The following BLAST results are available for this feature:
BLAST of CF835143 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835143 ID=CF835143; Name=CF835143; organism=Citrus sinensis; type=EST; length=633bpback to top |