CF835148

Overview
NameCF835148
Unique NameCF835148
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length722
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835148 vs. ExPASy Swiss-Prot
Match: CHS1_DAUCA (Chalcone synthase 1 OS=Daucus carota GN=CHS1 PE=2 SV=1)

HSP 1 Score: 284.648 bits (727), Expect = 3.520e-76
Identity = 144/191 (75.39%), Postives = 155/191 (81.15%), Query Frame = -1
Query:  150 FRGPADTHLISLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVP 722
            FRGP DTHL SLVGQALF           DP   +E+PL+++VS +QTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNI KSL EAF P+GISDWNSIFWIAHPGGPAILDQV           K+TRQVL +YGNMSSACVLFILDEMRK SA++   TTGEGLDWGVLFGFGPGLTVETVVLHSVP
Sbjct:  198 FRGPNDTHLDSLVGQALFGDGAGAVIVGSDPVIGIEKPLFEIVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIRKSLVEAFKPLGISDWNSIFWIAHPGGPAILDQVETELSLKPEKLKSTRQVLRDYGNMSSACVLFILDEMRKASAKDGHRTTGEGLDWGVLFGFGPGLTVETVVLHSVP 388          
BLAST of CF835148 vs. ExPASy Swiss-Prot
Match: CHSJ_PETHY (Chalcone synthase J OS=Petunia hybrida GN=CHSJ PE=2 SV=2)

HSP 1 Score: 284.263 bits (726), Expect = 4.597e-76
Identity = 145/190 (76.32%), Postives = 155/190 (81.58%), Query Frame = -1
Query:  153 FRGPADTHLISLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSV 722
            FRGP DTHL SLVGQALF           DP   VERPL++LVS SQT+LPDS+GAIDGHLREVGLTFHLLKDVPGLISKNI+KSL EAF P+GISDWNSIFWIAHPGGPAILDQV           +ATR VLSEYGNMSSACVLFILDEMRK S++E   TTGEGL+WGVLFGFGPGLTVETVVLHSV
Sbjct:  198 FRGPNDTHLDSLVGQALFGDGAAAIIIGSDPLPGVERPLFELVSASQTLLPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIQKSLVEAFQPLGISDWNSIFWIAHPGGPAILDQVELKLGLKPEKLRATRHVLSEYGNMSSACVLFILDEMRKASSKEGLGTTGEGLEWGVLFGFGPGLTVETVVLHSV 387          
BLAST of CF835148 vs. ExPASy Swiss-Prot
Match: CHSA_PETHY (Chalcone synthase A OS=Petunia hybrida GN=CHSA PE=2 SV=1)

HSP 1 Score: 283.493 bits (724), Expect = 7.841e-76
Identity = 145/190 (76.32%), Postives = 154/190 (81.05%), Query Frame = -1
Query:  153 FRGPADTHLISLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSV 722
            FRGP DTHL SLVGQALF           DP   VERPL++LVS +QT+LPDS GAIDGHLREVGLTFHLLKDVPGLISKNIEKSL EAF P+GISDWNS+FWIAHPGGPAILDQV           KATR VLS+YGNMSSACVLFILDEMRK SA+E   TTGEGL+WGVLFGFGPGLTVETVVLHSV
Sbjct:  198 FRGPNDTHLDSLVGQALFGDGAGAIIIGSDPIPGVERPLFELVSAAQTLLPDSHGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLEEAFKPLGISDWNSLFWIAHPGGPAILDQVEIKLGLKPEKLKATRNVLSDYGNMSSACVLFILDEMRKASAKEGLGTTGEGLEWGVLFGFGPGLTVETVVLHSV 387          
BLAST of CF835148 vs. ExPASy Swiss-Prot
Match: CHS2_CAMSI (Chalcone synthase 2 OS=Camellia sinensis GN=CHS2 PE=2 SV=1)

HSP 1 Score: 283.108 bits (723), Expect = 1.024e-75
Identity = 143/190 (75.26%), Postives = 155/190 (81.58%), Query Frame = -1
Query:  153 FRGPADTHLISLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSV 722
            FRGP+D HL SLVGQALF           DP   VE+PL++LVS +QTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSL+EAF P+ I+DWNS+FWIAHPGGPAILDQV           +ATR VLSEYGNMSSACVLFILDEMRK SA++   TTGEGLDWGVLFGFGPGLTVETVVLHSV
Sbjct:  198 FRGPSDAHLDSLVGQALFGDGAAAIIVGSDPIPEVEKPLFELVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLNEAFQPLNITDWNSLFWIAHPGGPAILDQVELKLALKPEKLRATRHVLSEYGNMSSACVLFILDEMRKSSAKKGLKTTGEGLDWGVLFGFGPGLTVETVVLHSV 387          
BLAST of CF835148 vs. ExPASy Swiss-Prot
Match: CHSY_HYDMC (Chalcone synthase OS=Hydrangea macrophylla GN=CHS PE=2 SV=1)

HSP 1 Score: 282.722 bits (722), Expect = 1.337e-75
Identity = 143/190 (75.26%), Postives = 154/190 (81.05%), Query Frame = -1
Query:  153 FRGPADTHLISLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSV 722
            FRGP+DTHL SLVGQALF           DP   VE+PL+++VS +QTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSL EAF P+ ISDWNSIFWIAHPGGPAILDQV           +ATR VLS+YGNMSSACVLFI+DEMRK SAEE   TTGEGL+WGVLFGFGPGLTVETVVLH V
Sbjct:  198 FRGPSDTHLDSLVGQALFGDGAAAVIIGSDPMPEVEKPLFEIVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFRPLDISDWNSIFWIAHPGGPAILDQVEKKLALKPEKLRATRNVLSDYGNMSSACVLFIMDEMRKNSAEEGLMTTGEGLEWGVLFGFGPGLTVETVVLHGV 387          
BLAST of CF835148 vs. ExPASy Swiss-Prot
Match: CHSE_IPOPU (Chalcone synthase E OS=Ipomoea purpurea GN=CHSE PE=2 SV=1)

HSP 1 Score: 282.722 bits (722), Expect = 1.337e-75
Identity = 143/190 (75.26%), Postives = 155/190 (81.58%), Query Frame = -1
Query:  153 FRGPADTHLISLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSV 722
            FRGP+D HL SLVGQALF           DPD  +ERPL+QLVS +QTILPDS GAIDGHLREVGLTFHLLKDVPGLISK+IEKSL+EAF P+GI DWNS+FWIAHPGGPAILDQV           +ATR VLSEYGNMSSACVLFILDEMRK S++E   TTGEGL+WGVLFGFGPGLTVETVVLHSV
Sbjct:  198 FRGPSDAHLDSLVGQALFGDGAAALIIGSDPDPDLERPLFQLVSAAQTILPDSGGAIDGHLREVGLTFHLLKDVPGLISKHIEKSLNEAFQPLGIRDWNSLFWIAHPGGPAILDQVEEKLELKPEKLRATRHVLSEYGNMSSACVLFILDEMRKASSKEGLNTTGEGLEWGVLFGFGPGLTVETVVLHSV 387          
BLAST of CF835148 vs. ExPASy Swiss-Prot
Match: CHSE_IPONI (Chalcone synthase E OS=Ipomoea nil GN=CHSE PE=2 SV=1)

HSP 1 Score: 282.722 bits (722), Expect = 1.337e-75
Identity = 143/190 (75.26%), Postives = 155/190 (81.58%), Query Frame = -1
Query:  153 FRGPADTHLISLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSV 722
            FRGP+D HL SLVGQALF           DPD  +ERPL+QLVS +QTILPDS GAIDGHLREVGLTFHLLKDVPGLISK+IEKSL+EAF P+GI DWNS+FWIAHPGGPAILDQV           +ATR VLSEYGNMSSACVLFILDEMRK S++E   TTGEGL+WGVLFGFGPGLTVETVVLHSV
Sbjct:  198 FRGPSDAHLDSLVGQALFGDGAAALIIGSDPDPDLERPLFQLVSAAQTILPDSGGAIDGHLREVGLTFHLLKDVPGLISKHIEKSLNEAFQPLGIHDWNSLFWIAHPGGPAILDQVEEKLELKPEKLRATRHVLSEYGNMSSACVLFILDEMRKASSKEGLNTTGEGLEWGVLFGFGPGLTVETVVLHSV 387          
BLAST of CF835148 vs. ExPASy Swiss-Prot
Match: CHS9_DAUCA (Chalcone synthase 9 OS=Daucus carota GN=CHS9 PE=2 SV=1)

HSP 1 Score: 282.722 bits (722), Expect = 1.337e-75
Identity = 143/191 (74.87%), Postives = 154/191 (80.63%), Query Frame = -1
Query:  150 FRGPADTHLISLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVP 722
            FRGP DTHL SLVGQALF           DP   +E+PL+++VS +QTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNI KSL EAF P+GISDWNSIFWIAHPGGPAILDQV           K+TRQVL +YGNMSSACVLFILDEMR  SA++   TTGEGLDWGVLFGFGPGLTVETVVLHSVP
Sbjct:  198 FRGPNDTHLDSLVGQALFGDGAGAVIVGSDPVIGIEKPLFEIVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIRKSLVEAFKPLGISDWNSIFWIAHPGGPAILDQVETELSLKPDKLKSTRQVLRDYGNMSSACVLFILDEMRNASAKDGHRTTGEGLDWGVLFGFGPGLTVETVVLHSVP 388          
BLAST of CF835148 vs. ExPASy Swiss-Prot
Match: CHS8_BROFI (Chalcone synthase 8 OS=Bromheadia finlaysoniana GN=CHS8 PE=2 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 2.980e-75
Identity = 138/192 (71.88%), Postives = 158/192 (82.29%), Query Frame = -1
Query:  147 FRGPADTHLISLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 722
            FRGP+++HL SLVGQALF           DPD++ ERPL+QLVS SQTILP+S+GAIDGHLRE+GLTFHLLKDVPGLISKNI+K L +AF P+G+ DWNSIFWIAHPGGPAILDQV            A+R VL+EYGNMSSACVLFILDEMR++SAE  +ATTGEGL+WGVLFGFGPGLTVET+VL SVPI
Sbjct:  199 FRGPSESHLDSLVGQALFGDGAAAIIVGSDPDSATERPLFQLVSASQTILPESEGAIDGHLREIGLTFHLLKDVPGLISKNIQKCLLDAFKPLGVHDWNSIFWIAHPGGPAILDQVEIKLGLKAEKLAASRNVLAEYGNMSSACVLFILDEMRRRSAEAGQATTGEGLEWGVLFGFGPGLTVETIVLRSVPI 390          
BLAST of CF835148 vs. ExPASy Swiss-Prot
Match: CHS4_BROFI (Chalcone synthase 4 OS=Bromheadia finlaysoniana GN=CHS4 PE=2 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 2.980e-75
Identity = 138/192 (71.88%), Postives = 158/192 (82.29%), Query Frame = -1
Query:  147 FRGPADTHLISLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 722
            FRGP+++HL SLVGQALF           DPD++ ERPL+QLVS SQTILP+S+GAIDGHLRE+GLTFHLLKDVPGLISKNI+K L +AF P+G+ DWNSIFWIAHPGGPAILDQV            A+R VL+EYGNMSSACVLFILDEMR++SAE  +ATTGEGL+WGVLFGFGPGLTVET+VL SVPI
Sbjct:  199 FRGPSESHLDSLVGQALFGDGAAAIIVGSDPDSATERPLFQLVSASQTILPESEGAIDGHLREIGLTFHLLKDVPGLISKNIQKCLLDAFKPLGVHDWNSIFWIAHPGGPAILDQVEIKLGLKAEKLAASRSVLAEYGNMSSACVLFILDEMRRRSAEAGQATTGEGLEWGVLFGFGPGLTVETIVLRSVPI 390          
The following BLAST results are available for this feature:
BLAST of CF835148 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
CHS1_DAUCA3.520e-7675.39Chalcone synthase 1 OS=Daucus carota GN=CHS1 PE=2 ... [more]
CHSJ_PETHY4.597e-7676.32Chalcone synthase J OS=Petunia hybrida GN=CHSJ PE=... [more]
CHSA_PETHY7.841e-7676.32Chalcone synthase A OS=Petunia hybrida GN=CHSA PE=... [more]
CHS2_CAMSI1.024e-7575.26Chalcone synthase 2 OS=Camellia sinensis GN=CHS2 P... [more]
CHSY_HYDMC1.337e-7575.26Chalcone synthase OS=Hydrangea macrophylla GN=CHS ... [more]
CHSE_IPOPU1.337e-7575.26Chalcone synthase E OS=Ipomoea purpurea GN=CHSE PE... [more]
CHSE_IPONI1.337e-7575.26Chalcone synthase E OS=Ipomoea nil GN=CHSE PE=2 SV... [more]
CHS9_DAUCA1.337e-7574.87Chalcone synthase 9 OS=Daucus carota GN=CHS9 PE=2 ... [more]
CHS8_BROFI2.980e-7571.88Chalcone synthase 8 OS=Bromheadia finlaysoniana GN... [more]
CHS4_BROFI2.980e-7571.88Chalcone synthase 4 OS=Bromheadia finlaysoniana GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06M03_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06M03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835148 ID=CF835148; Name=CF835148; organism=Citrus sinensis; type=EST; length=722bp
TTTTTTAAGAGAAAAGGTACGATGCCTTAAATTCAATTGACAAAACTAAA
CCTTCACACGATCAACCAATAATTCAAGAGTGAAAGCATACAACATAAAG
TTACTGAACTACTAAACATACTGATGGAGTTCTCACTTCAAGCTTTGATG
GGGACACTGTGCAGCACAACGGTCTCGACGGTGAGCCCCGGCCCGAACCC
GAACAGCACACCCCAATCTAGCCCTTCGCCGGTGGTGGCTTTCGCTTCCT
CAGCAGACTTCTTTCTCATCTCGTCAAGGATGAACAGGACACAAGCGCTT
GACATGTTACCGTACTCACTCAACACTTGACGTGTGGCCTTCAGCTTCTC
CTCTTTGAGGCCGAGTTTAGACTCCACTTGGTCCAGAATTGCGGGCCCAC
CGGGGTGAGCGATCCAGAATATCGAGTTCCAGTCGCTGATGCCAACCGGG
GCGAACGCTTCCGACAGGCTTTTCTCTATATTCTTTGAGATCAAGCCGGG
GACGTCTTTAAGCAAATGGAAAGTGAGACCGACTTCGCGCAAGTGTCCGT
CAATTGCACCGTCAGAGTCAGGGAGGATCGTCTGCGAAGTCGACACAAGC
TGATACAACGGACGCTCGACCGACGTGTCAGGATCGGCACCCACGATCAC
AGCAGCAGCACCATCACCGAACAAAGCCTGGCCCACAAGAGAAATCAGAT
GAGTATCGGCAGGGCCGCGGAA
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