CF835155
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_STAEQ (Nucleoside diphosphate kinase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=ndk PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.699e-23 Identity = 53/97 (54.64%), Postives = 65/97 (67.01%), Query Frame = 3 Query: 54 MEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQSA 344 ME+TF+MIKPD VQR L+GEII EKKG L G K M V A+KHY + KPF+ I +ITS PV AM+ EGE V R IIG+TNP+++A Sbjct: 1 MERTFLMIKPDAVQRNLIGEIISRIEKKGLKLVGGKFMQVPMELAEKHYSEHEGKPFYDKLISFITSAPVFAMVVEGENAVAVSRKIIGSTNPSEAA 97
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_PYRFU (Nucleoside diphosphate kinase OS=Pyrococcus furiosus GN=ndk PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.699e-23 Identity = 50/100 (50.00%), Postives = 69/100 (69.00%), Query Frame = 3 Query: 45 LKEMEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQSA 344 + E+E+T ++IKPD V RGL+GEII FEKKG + G+K++ +DR A+KHYE+ KPFF + I+YIT PVV M+ EG V R + GAT+P +A Sbjct: 1 MNEVERTLVIIKPDAVVRGLIGEIISRFEKKGLKIVGMKMIWIDRELAEKHYEEHKGKPFFEALIDYITKAPVVVMVVEGRYAVEVVRKMAGATDPKDAA 100
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_PROM0 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9301) GN=ndk PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.699e-23 Identity = 52/95 (54.74%), Postives = 67/95 (70.53%), Query Frame = 3 Query: 57 EQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQS 341 E+TFI IKPDGVQRG V EII FEKKGF L GLK + + A HY +PFFG +++I+SGPVVAM+ EGEGV+ + R +IG+T P ++ Sbjct: 4 ERTFIAIKPDGVQRGYVSEIIGRFEKKGFKLVGLKQLIPSKELAQNHYGVHRERPFFGDLVDFISSGPVVAMVWEGEGVILSARKLIGSTKPLEA 98
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_METKA (Nucleoside diphosphate kinase OS=Methanopyrus kandleri GN=ndk PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.699e-23 Identity = 53/100 (53.00%), Postives = 70/100 (70.00%), Query Frame = 3 Query: 45 LKEMEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQSA 344 + E+++ F+MIKPDGV RGLVGE+I E+KG + L++ +DR A+K YE+ KPFF IEY+TSGPVV MI EG V R IIGAT+PA++A Sbjct: 1 MAEVQREFVMIKPDGVVRGLVGEVIRRLERKGLKIVALEMRQLDRETAEKLYEEHRDKPFFEDLIEYVTSGPVVVMIVEGRKAVKVVRNIIGATDPAEAA 100
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_LISW6 (Nucleoside diphosphate kinase OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=ndk PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.699e-23 Identity = 49/96 (51.04%), Postives = 68/96 (70.83%), Query Frame = 3 Query: 54 MEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQS 341 MEQT++M+KPDGV+RGL+GEI+ EKKG L KL+ +DR A++HY + KPFF I +ITSGPV AM+ EG+ V+ R ++G TNP ++ Sbjct: 1 MEQTYVMVKPDGVERGLIGEIVAKIEKKGIKLVAGKLIQIDRKLAEQHYAEHIGKPFFEDLIGFITSGPVFAMVLEGDDVIKIARRMMGKTNPLEA 96
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_FRASC (Nucleoside diphosphate kinase OS=Frankia sp. (strain CcI3) GN=ndk PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.699e-23 Identity = 48/97 (49.48%), Postives = 72/97 (74.23%), Query Frame = 3 Query: 54 MEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQSA 344 +E+T I++KPDGV RGLVGE++ E+KG +L L+L T++R A+ HY + +SKPFFG +++ITSGP+VA++ EG V R +IGAT+P ++A Sbjct: 3 VERTLILVKPDGVSRGLVGEVVGRLERKGLTLVALELRTLERSVAETHYGEHASKPFFGELVDFITSGPLVALVAEGPRAVEASRGLIGATDPVKAA 99
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_DEIGD (Nucleoside diphosphate kinase OS=Deinococcus geothermalis (strain DSM 11300) GN=ndk PE=3 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 1.699e-23 Identity = 50/97 (51.55%), Postives = 69/97 (71.13%), Query Frame = 3 Query: 54 MEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQSA 344 ME+TF MIKPDGV+RGL EI+ +KKG+ + GLK M + R A++HY + +PFFG +++ITSGPVVA+ EGE + R ++GATNPA +A Sbjct: 1 MERTFAMIKPDGVRRGLTPEILARIQKKGYRVVGLKQMLISRELAERHYAEHRERPFFGELVDFITSGPVVAIALEGENAIAGWRAMMGATNPANAA 97
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_YEAST (Nucleoside diphosphate kinase OS=Saccharomyces cerevisiae GN=YNK1 PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 2.898e-23 Identity = 49/98 (50.00%), Postives = 68/98 (69.39%), Query Frame = 3 Query: 51 EMEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQSA 344 + E+TFI +KPDGVQRGLV +I+ FEKKG+ L +KL+ D ++HY + KPFF + ++ SGP++A + EG+ VV GRTI+GATNP SA Sbjct: 4 QTERTFIAVKPDGVQRGLVSQILSRFEKKGYKLVAIKLVKADDKLLEQHYAEHVGKPFFPKMVSFMKSGPILATVWEGKDVVRQGRTILGATNPLGSA 101
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_LISMO (Nucleoside diphosphate kinase OS=Listeria monocytogenes GN=ndk PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 2.898e-23 Identity = 49/96 (51.04%), Postives = 67/96 (69.79%), Query Frame = 3 Query: 54 MEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQS 341 MEQT++M+KPDGV+RGL+GEI+ EKKG + KLM +DR A+KHY + K FF I +ITSGPV AM+ EG+ + T R ++G TNP ++ Sbjct: 1 MEQTYVMVKPDGVERGLIGEIVTRIEKKGLKIVAGKLMQIDRELAEKHYAEHIGKSFFEDLIGFITSGPVFAMVLEGDDAIATARRMMGKTNPLEA 96
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_LISMH (Nucleoside diphosphate kinase OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=ndk PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 2.898e-23 Identity = 49/96 (51.04%), Postives = 67/96 (69.79%), Query Frame = 3 Query: 54 MEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQS 341 MEQT++M+KPDGV+RGL+GEI+ EKKG + KLM +DR A+KHY + K FF I +ITSGPV AM+ EG+ + T R ++G TNP ++ Sbjct: 1 MEQTYVMVKPDGVERGLIGEIVTRIEKKGLKIVAGKLMQIDRELAEKHYAEHIGKSFFEDLIGFITSGPVFAMVLEGDDAIATARRMMGKTNPLEA 96 The following BLAST results are available for this feature:
BLAST of CF835155 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835155 ID=CF835155; Name=CF835155; organism=Citrus sinensis; type=EST; length=346bpback to top |