CF835155
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_RHIEC (Nucleoside diphosphate kinase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=ndk PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.442e-14 Identity = 41/97 (42.27%), Postives = 55/97 (56.70%), Query Frame = 3 Query: 54 MEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQSA 344 +E+TF MIKPD +R L G I E G + K + + R A+ Y +PFFG +E +TSGP V + EGEG + R I+GATNPA +A Sbjct: 3 IERTFSMIKPDATKRNLTGAITKMLEDAGLRVVASKRVWMSRREAEGFYAVHKDRPFFGELVEGMTSGPTVVQVLEGEGAILKNREIMGATNPANAA 99
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_PSEPF (Nucleoside diphosphate kinase OS=Pseudomonas fluorescens (strain Pf0-1) GN=ndk PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.442e-14 Identity = 36/97 (37.11%), Postives = 60/97 (61.86%), Query Frame = 3 Query: 54 MEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQSA 344 +++TF +IKPD V + ++G+I FE G + KL + + A+ Y + S++ FFG + ++TSGPVV + EGE + R ++GATNP ++A Sbjct: 3 VQRTFSIIKPDAVAKNVIGKITTRFEDAGLRVVASKLKQLSKAEAEGFYAEHSARGFFGELVAFMTSGPVVVQVLEGENAIARNRELMGATNPKEAA 99
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_GEOSM (Nucleoside diphosphate kinase OS=Geobacter sp. (strain M21) GN=ndk PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.442e-14 Identity = 35/96 (36.46%), Postives = 60/96 (62.50%), Query Frame = 3 Query: 54 MEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQS 341 ME+TF +IKPD V+R + G+++ E+ GF + G+K + + + A+ Y +PFFG +++ GPV+A++ E E + R ++GATNPA + Sbjct: 1 MERTFAIIKPDAVERNVTGKVLAMIEEGGFKIVGMKKIRLSKCQAEGFYYVHKERPFFGDLCAFMSRGPVIALVLEKENAIADWRALMGATNPANA 96
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_AGRRK (Nucleoside diphosphate kinase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=ndk PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.442e-14 Identity = 40/97 (41.24%), Postives = 56/97 (57.73%), Query Frame = 3 Query: 54 MEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQSA 344 +E+TF MIKPD +R L G I FE G + K + + + A+ Y +PFFG ++ +TSGP V + EGEG + R I+GATNPA +A Sbjct: 3 IERTFSMIKPDATKRNLTGAITKIFEDNGLRVIASKRVWMSKREAEGFYAVHKERPFFGELVDGMTSGPTVVQVLEGEGAILKNREIMGATNPANAA 99
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_ACIF5 (Nucleoside diphosphate kinase OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=ndk PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.442e-14 Identity = 36/97 (37.11%), Postives = 59/97 (60.82%), Query Frame = 3 Query: 54 MEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQSA 344 +E+T +IKPD VQ+ +G I+ FEK G + K++ + R A Y ++PF+G ++++SGPV+ + EGEG + R ++GATNP +A Sbjct: 3 VERTLSIIKPDAVQKNAIGAILGRFEKAGLRIAAAKMLHLSRDDAGGFYAVHQARPFYGELCDFMSSGPVLVTVLEGEGAIAKNRDLMGATNPKDAA 99
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_ACIF2 (Nucleoside diphosphate kinase OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=ndk PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.442e-14 Identity = 36/97 (37.11%), Postives = 59/97 (60.82%), Query Frame = 3 Query: 54 MEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQSA 344 +E+T +IKPD VQ+ +G I+ FEK G + K++ + R A Y ++PF+G ++++SGPV+ + EGEG + R ++GATNP +A Sbjct: 3 VERTLSIIKPDAVQKNAIGAILGRFEKAGLRIAAAKMLHLSRDDAGGFYAVHQARPFYGELCDFMSSGPVLVTVLEGEGAIAKNRDLMGATNPKDAA 99
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDKB_MERPR (Nucleoside diphosphate kinase B (Fragments) OS=Merluccius productus GN=nme2 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.442e-14 Identity = 44/96 (45.83%), Postives = 58/96 (60.42%), Query Frame = 3 Query: 54 MEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQS 341 MEQTF+ IKPDGVQRGL GE+ +K ++ M KHY DL PF+ +Y++SGPV AM+ EGEG+V + ++G TNPA S Sbjct: 1 MEQTFVAIKPDGVQRGLCGEV----------MKFIQPM--------KHYLDLKDMPFYAGLCKYMSSGPVFAMVWEGEGIV---KMMLGETNPADS 75
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDKB_MERHU (Nucleoside diphosphate kinase B (Fragments) OS=Merluccius hubbsi GN=nme2 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.442e-14 Identity = 44/96 (45.83%), Postives = 58/96 (60.42%), Query Frame = 3 Query: 54 MEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQS 341 MEQTF+ IKPDGVQRGL GE+ +K ++ M KHY DL PF+ +Y++SGPV AM+ EGEG+V + ++G TNPA S Sbjct: 1 MEQTFVAIKPDGVQRGLCGEV----------MKFIQPM--------KHYLDLKDMPFYAGLCKYMSSGPVFAMVWEGEGIV---KMMLGETNPADS 75
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDKB_MERGA (Nucleoside diphosphate kinase B (Fragments) OS=Merluccius gayi GN=nme2 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.442e-14 Identity = 44/96 (45.83%), Postives = 58/96 (60.42%), Query Frame = 3 Query: 54 MEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQS 341 MEQTF+ IKPDGVQRGL GE+ +K ++ M KHY DL PF+ +Y++SGPV AM+ EGEG+V + ++G TNPA S Sbjct: 1 MEQTFVAIKPDGVQRGLCGEV----------MKFIQPM--------KHYLDLKDMPFYAGLCKYMSSGPVFAMVWEGEGIV---KMMLGETNPADS 75
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDKB_MERAP (Nucleoside diphosphate kinase B (Fragments) OS=Merluccius australis polylepis GN=nme2 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.442e-14 Identity = 44/96 (45.83%), Postives = 58/96 (60.42%), Query Frame = 3 Query: 54 MEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQS 341 MEQTF+ IKPDGVQRGL GE+ +K ++ M KHY DL PF+ +Y++SGPV AM+ EGEG+V + ++G TNPA S Sbjct: 1 MEQTFVAIKPDGVQRGLCGEV----------MKFIQPM--------KHYLDLKDMPFYAGLCKYMSSGPVFAMVWEGEGIV---KMMLGETNPADS 75 The following BLAST results are available for this feature:
BLAST of CF835155 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835155 ID=CF835155; Name=CF835155; organism=Citrus sinensis; type=EST; length=346bpback to top |