CF835155
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_GEOBB (Nucleoside diphosphate kinase OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=ndk PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.459e-14 Identity = 35/96 (36.46%), Postives = 60/96 (62.50%), Query Frame = 3 Query: 54 MEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQS 341 ME+TF +IKPD V+R + G+++ E+ GF + G+K + + + A+ Y +PFFG +++ GPV+A++ E E + R ++GATNPA + Sbjct: 1 MERTFAIIKPDAVERNVTGKVLAMIEEGGFKIVGMKKIRLSKCQAEGFYYVHKERPFFGDLCAFMSRGPVIALVLEKENAIADWRGLMGATNPANA 96
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_FLAJ1 (Nucleoside diphosphate kinase OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=ndk PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.459e-14 Identity = 39/95 (41.05%), Postives = 56/95 (58.95%), Query Frame = 3 Query: 60 QTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQSA 344 +TF MIKPD V G +G I+ GF + LKL + A Y + +PF+G +E+++ GP+VA I E + V RT+IGATNPA++A Sbjct: 5 RTFTMIKPDAVANGHIGNILAMITNGGFKIVSLKLTQLTVADAKAFYAVHAERPFYGELVEFMSRGPIVAAILEKDNAVEDFRTLIGATNPAEAA 99
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_CAMC1 (Nucleoside diphosphate kinase OS=Campylobacter concisus (strain 13826) GN=ndk PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.459e-14 Identity = 37/97 (38.14%), Postives = 58/97 (59.79%), Query Frame = 3 Query: 54 MEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQSA 344 M++T +IKPD V++ +VG+II FE G + K + + + A Y +PFF ++++ SGPVV M+ EGE V R ++GATNP ++A Sbjct: 1 MQRTLSIIKPDAVKKNVVGKIIDRFESNGLRIAAAKKIKLSKCDAKAFYAVHKDRPFFNDLVDFMVSGPVVVMVLEGENAVAKNRELMGATNPKEAA 97
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_AZOC5 (Nucleoside diphosphate kinase OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=ndk PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.459e-14 Identity = 39/97 (40.21%), Postives = 57/97 (58.76%), Query Frame = 3 Query: 54 MEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQSA 344 +E+TF +IKPD +R L G I EK G + K + + + A+ Y S++PFF + ++TSGPVV + EGE V R ++GATNPA +A Sbjct: 3 IERTFSIIKPDATRRNLTGAINAVIEKAGLRIVAQKRIQMTKAQAEAFYAVHSARPFFNDLVSFMTSGPVVVQVLEGEDAVAKYREVMGATNPANAA 99
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_YERPY (Nucleoside diphosphate kinase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=ndk PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.211e-14 Identity = 35/93 (37.63%), Postives = 55/93 (59.14%), Query Frame = 3 Query: 54 MEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNP 332 +E+TF +IKP+ V +G I FE GF + K++ + + A+ Y + +PFF +E++TSGP++ + EGE V R I+GATNP Sbjct: 3 LERTFSIIKPNAVANNNIGAIYARFESAGFKIIAAKMLHLTKEQAEGFYAEHKGRPFFDGLVEFMTSGPIIVQVLEGENAVQRHRDIMGATNP 95
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_YERPS (Nucleoside diphosphate kinase OS=Yersinia pseudotuberculosis GN=ndk PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.211e-14 Identity = 35/93 (37.63%), Postives = 55/93 (59.14%), Query Frame = 3 Query: 54 MEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNP 332 +E+TF +IKP+ V +G I FE GF + K++ + + A+ Y + +PFF +E++TSGP++ + EGE V R I+GATNP Sbjct: 3 LERTFSIIKPNAVANNNIGAIYARFESAGFKIIAAKMLHLTKEQAEGFYAEHKGRPFFDGLVEFMTSGPIIVQVLEGENAVQRHRDIMGATNP 95
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_VIBHB (Nucleoside diphosphate kinase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=ndk PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.211e-14 Identity = 36/97 (37.11%), Postives = 58/97 (59.79%), Query Frame = 3 Query: 54 MEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQSA 344 +E+TF ++KPD V+R L+GEI EK G + K++ + A Y + KPFF + E++TSGP++ + EGE + R ++G TNP ++A Sbjct: 3 LERTFSIVKPDAVERNLIGEIYHRIEKAGLRIVAAKMVHLTEEQASGFYAEHEGKPFFPALKEFMTSGPIMVQVLEGEDAIARYRELMGKTNPEEAA 99
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_VIBCM (Nucleoside diphosphate kinase OS=Vibrio cholerae serotype O1 (strain M66-2) GN=ndk PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.211e-14 Identity = 37/97 (38.14%), Postives = 57/97 (58.76%), Query Frame = 3 Query: 54 MEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQSA 344 +E+TF +IKPD V+R L+GEI EK G + K++ + A Y + KPFF E++TSGP++ + EGE + R ++G TNP ++A Sbjct: 3 LERTFSIIKPDAVKRNLIGEIYHRIEKAGLQIIAAKMVHLSEEQASGFYAEHEGKPFFEPLKEFMTSGPIMVQVLEGENAIARYRELMGKTNPEEAA 99
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_VIBCH (Nucleoside diphosphate kinase OS=Vibrio cholerae GN=ndk PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.211e-14 Identity = 37/97 (38.14%), Postives = 57/97 (58.76%), Query Frame = 3 Query: 54 MEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQSA 344 +E+TF +IKPD V+R L+GEI EK G + K++ + A Y + KPFF E++TSGP++ + EGE + R ++G TNP ++A Sbjct: 3 LERTFSIIKPDAVKRNLIGEIYHRIEKAGLQIIAAKMVHLSEEQASGFYAEHEGKPFFEPLKEFMTSGPIMVQVLEGENAIARYRELMGKTNPEEAA 99
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_VIBC3 (Nucleoside diphosphate kinase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=ndk PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.211e-14 Identity = 37/97 (38.14%), Postives = 57/97 (58.76%), Query Frame = 3 Query: 54 MEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQSA 344 +E+TF +IKPD V+R L+GEI EK G + K++ + A Y + KPFF E++TSGP++ + EGE + R ++G TNP ++A Sbjct: 3 LERTFSIIKPDAVKRNLIGEIYHRIEKAGLQIIAAKMVHLSEEQASGFYAEHEGKPFFEPLKEFMTSGPIMVQVLEGENAIARYRELMGKTNPEEAA 99 The following BLAST results are available for this feature:
BLAST of CF835155 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835155 ID=CF835155; Name=CF835155; organism=Citrus sinensis; type=EST; length=346bpback to top |