CF835155
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDKA_MOUSE (Nucleoside diphosphate kinase A OS=Mus musculus GN=Nme1 PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.064e-25 Identity = 56/95 (58.95%), Postives = 67/95 (70.53%), Query Frame = 3 Query: 57 EQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQS 341 E+TFI IKPDGVQRGLVGEII FE+KGF L GLK + +HY DL +PFF ++Y+ SGPVVAM+ EG VV TGR ++G TNPA S Sbjct: 5 ERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVGLKFLQASEDLLKEHYTDLKDRPFFTGLVKYMHSGPVVAMVWEGLNVVKTGRVMLGETNPADS 99
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDKA_RAT (Nucleoside diphosphate kinase A OS=Rattus norvegicus GN=Nme1 PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.390e-25 Identity = 56/95 (58.95%), Postives = 67/95 (70.53%), Query Frame = 3 Query: 57 EQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQS 341 E+TFI IKPDGVQRGLVGEII FE+KGF L GLK + +HY DL +PFF ++Y+ SGPVVAM+ EG VV TGR ++G TNPA S Sbjct: 5 ERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVGLKFIQASEDLLKEHYIDLKDRPFFSGLVKYMHSGPVVAMVWEGLNVVKTGRVMLGETNPADS 99
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_SYNSC (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain CC9605) GN=ndk PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.815e-25 Identity = 54/95 (56.84%), Postives = 71/95 (74.74%), Query Frame = 3 Query: 57 EQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQS 341 E+TFI IKPDGVQRGLVGEI+ FE+KGF L GLK +T R A++HY +PFF +++ITSGPVVAM+ EG+GV+ + R +IGAT P ++ Sbjct: 3 ERTFIAIKPDGVQRGLVGEILGRFERKGFKLVGLKQITPSRALAEQHYGVHKERPFFAGLVDFITSGPVVAMVWEGDGVIASARKLIGATKPLEA 97
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_SYNPX (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain WH8102) GN=ndk PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.815e-25 Identity = 54/95 (56.84%), Postives = 71/95 (74.74%), Query Frame = 3 Query: 57 EQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQS 341 E+TFI IKPDGVQRGLVGEI+ FE+KGF L GLK +T R A++HY +PFF +++ITSGPVVAM+ EG+GV+ + R +IGAT P ++ Sbjct: 3 ERTFIAIKPDGVQRGLVGEILGRFERKGFKLVGLKQITPSRALAEQHYGVHKERPFFAGLVDFITSGPVVAMVWEGDGVIASARKLIGATKPLEA 97
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_SYNPW (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain WH7803) GN=ndk PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.815e-25 Identity = 53/95 (55.79%), Postives = 71/95 (74.74%), Query Frame = 3 Query: 57 EQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQS 341 E+TFI IKPDGVQRGL+GEI+ FE+KGF L GLK +T R A++HY +PFF +++ITSGPVVAM+ EG+GV+ + R +IGAT P ++ Sbjct: 4 ERTFIAIKPDGVQRGLIGEILGRFERKGFKLVGLKQLTPSRELAEQHYGVHKERPFFAGLVDFITSGPVVAMVWEGDGVIASARKLIGATKPLEA 98
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_OCEIH (Nucleoside diphosphate kinase OS=Oceanobacillus iheyensis GN=ndk PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.815e-25 Identity = 51/96 (53.12%), Postives = 69/96 (71.88%), Query Frame = 3 Query: 54 MEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQS 341 ME+TF+M+KPDGVQR L+GEI+ FE KG+ L G KLM V A+ HY + +PFFG +++ITSGPV AM+ EGE V+ T R ++G TNP ++ Sbjct: 1 MEKTFLMVKPDGVQRELIGEIVKRFETKGYKLAGAKLMQVSNQLAETHYSEHKERPFFGELVDFITSGPVFAMVWEGENVIATARKMMGKTNPLEA 96
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_BACLD (Nucleoside diphosphate kinase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=ndk PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 2.371e-25 Identity = 51/96 (53.12%), Postives = 70/96 (72.92%), Query Frame = 3 Query: 54 MEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQS 341 ME+TF+M+KPDGVQR L+GEI++ FE+KG L G KLM V A +HY++ + KPFFG +++ITSGPV AM+ EGE + R +IG TNP ++ Sbjct: 1 MEKTFVMVKPDGVQRQLIGEILLRFERKGLQLIGAKLMKVSEETAGEHYKEHNGKPFFGELVDFITSGPVFAMVWEGEDAIAVARQLIGKTNPKEA 96
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_SYNS9 (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain CC9902) GN=ndk PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 3.096e-25 Identity = 54/95 (56.84%), Postives = 70/95 (73.68%), Query Frame = 3 Query: 57 EQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQS 341 E+TF+ IKPDGVQRGLVGEI+ FE+KGF L GLK +T R A++HY +PFF + +ITSGPVVAM+ EG+GV+ + R +IGAT P +S Sbjct: 3 ERTFVAIKPDGVQRGLVGEILGRFERKGFKLVGLKQITPSRALAEEHYGVHKERPFFAGLVGFITSGPVVAMVWEGDGVIASARKLIGATKPLES 97
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_SYNP6 (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=ndk PE=3 SV=2) HSP 1 Score: 113.62 bits (283), Expect = 3.096e-25 Identity = 56/93 (60.22%), Postives = 68/93 (73.12%), Query Frame = 3 Query: 54 MEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNP 332 ME+TFI IKPDGVQRGLVG II FE+KGF L GLK + R A++HY +PFF +E+ITSGP+VA++ EGEGVV R +IGATNP Sbjct: 1 MERTFIAIKPDGVQRGLVGTIIGRFEQKGFKLVGLKQLKPSRELAEQHYAVHRERPFFNGLVEFITSGPIVAIVLEGEGVVAAARKLIGATNP 93
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_SYNE7 (Nucleoside diphosphate kinase OS=Synechococcus elongatus (strain PCC 7942) GN=ndk PE=3 SV=2) HSP 1 Score: 113.62 bits (283), Expect = 3.096e-25 Identity = 56/93 (60.22%), Postives = 68/93 (73.12%), Query Frame = 3 Query: 54 MEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNP 332 ME+TFI IKPDGVQRGLVG II FE+KGF L GLK + R A++HY +PFF +E+ITSGP+VA++ EGEGVV R +IGATNP Sbjct: 1 MERTFIAIKPDGVQRGLVGTIIGRFEQKGFKLVGLKQLKPSRELAEQHYAVHRERPFFNGLVEFITSGPIVAIVLEGEGVVAAARKLIGATNP 93 The following BLAST results are available for this feature:
BLAST of CF835155 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835155 ID=CF835155; Name=CF835155; organism=Citrus sinensis; type=EST; length=346bpback to top |