CF835155
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_THET8 (Nucleoside diphosphate kinase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=ndk PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 4.044e-25 Identity = 53/93 (56.99%), Postives = 70/93 (75.27%), Query Frame = 3 Query: 54 MEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNP 332 ME+TF+MIKPDGV+RGLVGEI+ FE+KGF + LKLM + + A++HY + KPFF + +ITSGPVVAM+ EG GVV R ++GAT+P Sbjct: 1 MERTFVMIKPDGVRRGLVGEILARFERKGFRIAALKLMQISQELAERHYAEHREKPFFPGLVRFITSGPVVAMVLEGPGVVAEVRKMMGATHP 93
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_THET2 (Nucleoside diphosphate kinase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=ndk PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 4.044e-25 Identity = 53/93 (56.99%), Postives = 70/93 (75.27%), Query Frame = 3 Query: 54 MEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNP 332 ME+TF+MIKPDGV+RGLVGEI+ FE+KGF + LKLM + + A++HY + KPFF + +ITSGPVVAM+ EG GVV R ++GAT+P Sbjct: 1 MERTFVMIKPDGVRRGLVGEILARFERKGFRIAALKLMRISQELAERHYAEHREKPFFPGLVRFITSGPVVAMVLEGPGVVAEVRKMMGATHP 93
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_PROMM (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9313) GN=ndk PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 4.044e-25 Identity = 53/93 (56.99%), Postives = 69/93 (74.19%), Query Frame = 3 Query: 54 MEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNP 332 ME+TF+ IKPDGVQRGLVGEI+ FE+KGF L GLK +T R A +HY +PFF +++ITSGPV+AM+ EG+GV+ + R +IGAT P Sbjct: 3 MERTFVAIKPDGVQRGLVGEILGRFERKGFKLVGLKQVTPSRDLAGEHYGVHRERPFFAGLVDFITSGPVIAMVWEGDGVIASARKLIGATKP 95
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDKB_PONAB (Nucleoside diphosphate kinase B OS=Pongo abelii GN=NME2 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 4.044e-25 Identity = 54/99 (54.55%), Postives = 68/99 (68.69%), Query Frame = 3 Query: 45 LKEMEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQS 341 + +E+TFI IKPDGVQRGLVGEII FE+KGF L +K + +HY DL +PFF ++Y+ SGPVVAM+ EG VV TGR ++G TNPA S Sbjct: 1 MANLERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLRASEEHLKQHYTDLKDRPFFPGLVKYMNSGPVVAMVWEGLNVVKTGRLMLGETNPADS 99
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_PROM1 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain NATL1A) GN=ndk PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 5.281e-25 Identity = 52/96 (54.17%), Postives = 70/96 (72.92%), Query Frame = 3 Query: 54 MEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQS 341 +E+TF+ IKPDGVQRGL+ EI+ FE KGF L GLK +T + A+KHY +PFF +++ITSGPVVAM+ EGEGV+ + R +IGAT P ++ Sbjct: 3 LERTFVAIKPDGVQRGLIAEILGRFETKGFKLVGLKQLTPSKELAEKHYGVHKDRPFFSGLVDFITSGPVVAMVWEGEGVIASARKLIGATKPLEA 98
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDKB_RAT (Nucleoside diphosphate kinase B OS=Rattus norvegicus GN=Nme2 PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 5.281e-25 Identity = 54/99 (54.55%), Postives = 68/99 (68.69%), Query Frame = 3 Query: 45 LKEMEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQS 341 + +E+TFI IKPDGVQRGLVGEII FE+KGF L +K + +HY DL +PFF ++Y+ SGPVVAM+ EG VV TGR ++G TNPA S Sbjct: 1 MANLERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLRASEEHLKQHYIDLKDRPFFPGLVKYMNSGPVVAMVWEGLNVVKTGRVMLGETNPADS 99
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDKB_MOUSE (Nucleoside diphosphate kinase B OS=Mus musculus GN=Nme2 PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 5.281e-25 Identity = 54/99 (54.55%), Postives = 68/99 (68.69%), Query Frame = 3 Query: 45 LKEMEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQS 341 + +E+TFI IKPDGVQRGLVGEII FE+KGF L +K + +HY DL +PFF ++Y+ SGPVVAM+ EG VV TGR ++G TNPA S Sbjct: 1 MANLERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLRASEEHLKQHYIDLKDRPFFPGLVKYMNSGPVVAMVWEGLNVVKTGRVMLGETNPADS 99
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDKB_HUMAN (Nucleoside diphosphate kinase B OS=Homo sapiens GN=NME2 PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 5.281e-25 Identity = 54/99 (54.55%), Postives = 68/99 (68.69%), Query Frame = 3 Query: 45 LKEMEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQS 341 + +E+TFI IKPDGVQRGLVGEII FE+KGF L +K + +HY DL +PFF ++Y+ SGPVVAM+ EG VV TGR ++G TNPA S Sbjct: 1 MANLERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLRASEEHLKQHYIDLKDRPFFPGLVKYMNSGPVVAMVWEGLNVVKTGRVMLGETNPADS 99
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDKA1_BOVIN (Nucleoside diphosphate kinase A 1 OS=Bos taurus GN=NME1-1 PE=1 SV=3) HSP 1 Score: 112.849 bits (281), Expect = 5.281e-25 Identity = 54/95 (56.84%), Postives = 66/95 (69.47%), Query Frame = 3 Query: 57 EQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQS 341 E+TFI IKPDGVQRGL+GEII FE+KGF L +K M +HY DL +PFF ++Y+ SGPVVAM+ EG VV TGR ++G TNPA S Sbjct: 5 ERTFIAIKPDGVQRGLIGEIIKRFEQKGFRLVAMKFMRASEDLLKEHYIDLKDRPFFAGLVKYMHSGPVVAMVWEGLNVVKTGRVMLGETNPADS 99
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_SYMTH (Nucleoside diphosphate kinase OS=Symbiobacterium thermophilum GN=ndk PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 6.898e-25 Identity = 52/96 (54.17%), Postives = 69/96 (71.88%), Query Frame = 3 Query: 54 MEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQS 341 ME++F+M+KPDGVQRGL+GE+I E++G L KLM V R A++HY L KPFF S IE+ITSGPV+AM+ EG ++ R +GATNPA + Sbjct: 1 MERSFVMVKPDGVQRGLIGEVISRLERRGLKLVAAKLMRVSRELAEEHYAQLKDKPFFPSLIEFITSGPVMAMVWEGPNAISIIRKTMGATNPANA 96 The following BLAST results are available for this feature:
BLAST of CF835155 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835155 ID=CF835155; Name=CF835155; organism=Citrus sinensis; type=EST; length=346bpback to top |