CF835155
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_PROM3 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9303) GN=ndk PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 1.537e-24 Identity = 52/96 (54.17%), Postives = 70/96 (72.92%), Query Frame = 3 Query: 54 MEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQS 341 +E+TF+ IKPDGVQRGLVGEI+ FE+KGF L GLK + R A +HY +PFF +++ITSGPVVAM+ EG+GV+ + R +IGAT P ++ Sbjct: 3 VERTFVAIKPDGVQRGLVGEILGRFERKGFKLVGLKQLAPSRELAGEHYGVHRERPFFAGLVDFITSGPVVAMVWEGDGVIASARKLIGATKPLEA 98
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_SYNJB (Nucleoside diphosphate kinase OS=Synechococcus sp. GN=ndk PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 2.007e-24 Identity = 52/96 (54.17%), Postives = 70/96 (72.92%), Query Frame = 3 Query: 54 MEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQS 341 ME+TFI IKPDGVQRGLVG II E +G+ L GLKL+ V + A+ HY + +PFF S +++ITSGPVVAM+ +G+GV+ R +IG TNP ++ Sbjct: 1 MERTFIAIKPDGVQRGLVGTIIQRLESRGYQLVGLKLVQVSQELAEAHYAEHKERPFFHSLVKFITSGPVVAMVWQGKGVIAAARKLIGKTNPLEA 96
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_GINCI (Nucleoside diphosphate kinase (Fragment) OS=Ginglymostoma cirratum PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 2.007e-24 Identity = 52/95 (54.74%), Postives = 69/95 (72.63%), Query Frame = 3 Query: 57 EQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQS 341 E+TFI +KPDGVQR +VGE+I FE+KGF L +K + + +KHY +LS KPF+ I+Y++SGPVVAM+ EG VV TGR ++G TNPA S Sbjct: 4 ERTFIAVKPDGVQRCIVGEVIKRFEQKGFKLVAMKFLQAPKDLLEKHYCELSDKPFYPKLIKYMSSGPVVAMVWEGLNVVKTGRVMLGETNPADS 98
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDKA_CANFA (Nucleoside diphosphate kinase A OS=Canis familiaris GN=NME1 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 2.007e-24 Identity = 54/95 (56.84%), Postives = 66/95 (69.47%), Query Frame = 3 Query: 57 EQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQS 341 E+TFI IKPDGVQR LVGEII FE+KGF L +KL+ +HY DL +PFF ++Y+ SGPVVAM+ EG VV TGR ++G TNPA S Sbjct: 5 ERTFIAIKPDGVQRSLVGEIIKRFEQKGFRLIAMKLIQASEDLLKEHYIDLKDRPFFAGLVKYMQSGPVVAMVWEGLNVVKTGRVMLGETNPADS 99
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_EXIS2 (Nucleoside diphosphate kinase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=ndk PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 3.423e-24 Identity = 50/96 (52.08%), Postives = 68/96 (70.83%), Query Frame = 3 Query: 54 MEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQS 341 MEQTF+M+KPDGV+RGL+GEII E+KGF ++ +K+M V A HY + + KPFFG + ++TSGPVVA+ EGE VV R +IG T P ++ Sbjct: 1 MEQTFLMVKPDGVERGLIGEIIARIERKGFVIREMKMMQVTEELAQAHYAEHAEKPFFGELVTFLTSGPVVALRVEGEDVVTVSRMMIGKTKPTEA 96
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_CHICK (Nucleoside diphosphate kinase OS=Gallus gallus PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 3.423e-24 Identity = 53/95 (55.79%), Postives = 66/95 (69.47%), Query Frame = 3 Query: 57 EQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQS 341 E+TFI IKPDGVQRGLVGEII FE+KGF L +K + +HY DL +PF+ ++Y+ SGPVVAM+ EG VV TGR ++G TNPA S Sbjct: 6 ERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFVHASEDLLKQHYIDLKDRPFYPGLVKYMNSGPVVAMVWEGLNVVKTGRVMLGETNPADS 100
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_PROMA (Nucleoside diphosphate kinase OS=Prochlorococcus marinus GN=ndk PE=3 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 4.471e-24 Identity = 52/96 (54.17%), Postives = 70/96 (72.92%), Query Frame = 3 Query: 54 MEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQS 341 +E+TF+ IKPDGVQRGLVGEI+ FE+KGF L GLK + + A+KHY +PFF + +ITSGPVVAM+ EG+GV+ + R +IGAT P ++ Sbjct: 3 VERTFLAIKPDGVQRGLVGEILGRFERKGFKLVGLKQLIPSKELAEKHYGVHKERPFFTGLVGFITSGPVVAMVWEGDGVILSARKLIGATKPLEA 98
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_HALMA (Nucleoside diphosphate kinase OS=Haloarcula marismortui GN=ndk PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 4.471e-24 Identity = 48/100 (48.00%), Postives = 71/100 (71.00%), Query Frame = 3 Query: 45 LKEMEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQSA 344 + E E+TF+M+KPDGVQRGL+G+I+ FE +G + G K M +D+ A++HY + KPFF +++ITSGPV AM+ EG+ RT++G T+PA+SA Sbjct: 1 MSEHERTFVMVKPDGVQRGLIGDIVSRFEDRGLKMVGGKFMQIDQELAEEHYGEHEDKPFFDGLVDFITSGPVFAMVWEGQDATRQVRTMMGETDPAESA 100
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_STACT (Nucleoside diphosphate kinase OS=Staphylococcus carnosus (strain TM300) GN=ndk PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 7.626e-24 Identity = 54/97 (55.67%), Postives = 67/97 (69.07%), Query Frame = 3 Query: 54 MEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQSA 344 ME+TF+MIKPDGVQR LVGEII EKKG L G K MTV + A+ HY + + KPF+ + +ITS PV AM+ EGE VV R +IG TNP ++A Sbjct: 1 MERTFLMIKPDGVQRKLVGEIITRLEKKGLKLVGGKFMTVSKEKAETHYGEHADKPFYEGLVSFITSAPVFAMVVEGENVVEVTRNMIGKTNPTEAA 97
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_PROM9 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9312) GN=ndk PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 7.626e-24 Identity = 53/95 (55.79%), Postives = 67/95 (70.53%), Query Frame = 3 Query: 57 EQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQS 341 E+TFI IKPDGVQRG V EII FEKKGF L GLK + + A HY +PFFG +++I+SGPVVAM+ EGEGV+ + R +IGAT P ++ Sbjct: 4 ERTFIAIKPDGVQRGYVSEIIGRFEKKGFKLVGLKQLIPSKDLAQNHYGVHRERPFFGDLVDFISSGPVVAMVWEGEGVILSARKLIGATKPLEA 98 The following BLAST results are available for this feature:
BLAST of CF835155 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835155 ID=CF835155; Name=CF835155; organism=Citrus sinensis; type=EST; length=346bpback to top |