CF835163

Overview
NameCF835163
Unique NameCF835163
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length657
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835163 vs. ExPASy Swiss-Prot
Match: METK2_DIACA (S-adenosylmethionine synthetase 2 OS=Dianthus caryophyllus GN=SAM2 PE=2 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 2.297e-60
Identity = 117/145 (80.69%), Postives = 124/145 (85.52%), Query Frame = -3
Query:  221 LTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKPLKWEKLQA 655
            LTGRKIIIDTY             KDPTKVDRSGAYI RQAAKSIVASGLARRCIVQ+SYAIGVPEPLSVFVD+YGTGKI D+EILKIVKENFDFRPGMI+I LDLK+GGN R+LKTAAYGHFGR+DPDFTWE  K LKWEK QA
Sbjct:  253 LTGRKIIIDTYGGWGAHGGGAFSRKDPTKVDRSGAYIARQAAKSIVASGLARRCIVQISYAIGVPEPLSVFVDTYGTGKIHDREILKIVKENFDFRPGMIAIALDLKKGGN-RYLKTAAYGHFGREDPDFTWEAAKTLKWEKPQA 396          
BLAST of CF835163 vs. ExPASy Swiss-Prot
Match: METK1_PICSI (S-adenosylmethionine synthetase 1 OS=Picea sitchensis GN=METK1 PE=2 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 3.918e-60
Identity = 117/144 (81.25%), Postives = 124/144 (86.11%), Query Frame = -3
Query:  230 LTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTG--KIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKPLKWEK 655
            LTGRKIIIDTY            GKDPTKVDRSGAYIVRQAAKS+VA+GLARRC+VQVSYAIGVPEPLSVFVD+YGTG  KI D EILK++KENFDFRPGMISINLDLKRGGN RF KTAAYGHFGR+DPDFTWE VK LKWEK
Sbjct:  249 LTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVAAGLARRCLVQVSYAIGVPEPLSVFVDTYGTGTGKIQDAEILKLIKENFDFRPGMISINLDLKRGGNMRFQKTAAYGHFGREDPDFTWETVKVLKWEK 392          
BLAST of CF835163 vs. ExPASy Swiss-Prot
Match: METK1_VITVI (S-adenosylmethionine synthetase 1 OS=Vitis vinifera GN=METK1 PE=3 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 8.728e-60
Identity = 116/142 (81.69%), Postives = 123/142 (86.62%), Query Frame = -3
Query:  230 LTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKPLKWEK 655
            LTGRKIIIDTY            GKDPTKVDRSGAYIVRQAAKS+VASGLARRCIVQVSYAIGVPEPLSVFVD+Y TGKIPDK+IL ++K+NFDFRPGMISINLDLKRGGN RF KTAAYGHFGRDDPDF+WE VK LK EK
Sbjct:  249 LTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVPEPLSVFVDTYKTGKIPDKDILALIKKNFDFRPGMISINLDLKRGGNFRFQKTAAYGHFGRDDPDFSWETVKQLKPEK 390          
BLAST of CF835163 vs. ExPASy Swiss-Prot
Match: METK_MUSAC (S-adenosylmethionine synthetase OS=Musa acuminata GN=METK PE=2 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.140e-59
Identity = 117/142 (82.39%), Postives = 124/142 (87.32%), Query Frame = -3
Query:  230 LTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKPLKWEK 655
            LTGRKIIIDTY            GKDPTKVDRSGAY+ RQAAKSIVAS LARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPDKEILKIVKENFDFRPG+I+INL LKRGG  R+LKTAAYGHFGRDDPDFTWE+VKPL+ EK
Sbjct:  250 LTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYVARQAAKSIVASELARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKENFDFRPGLITINLGLKRGGY-RYLKTAAYGHFGRDDPDFTWEVVKPLELEK 390          
BLAST of CF835163 vs. ExPASy Swiss-Prot
Match: METK3_VITVI (S-adenosylmethionine synthetase 3 OS=Vitis vinifera GN=METK3 PE=3 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 3.317e-59
Identity = 114/139 (82.01%), Postives = 121/139 (87.05%), Query Frame = -3
Query:  239 LTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKPLK 655
            LTGRKIIIDTY            GKDPTKVDRSGAYIVRQAAKS+VASGLARRC+VQVSYAIGVPEPLSVFVD+Y TGKIPDK+IL ++KENFDFRPGMI+INLDLKRGGN RF KTAAYGHFGRDDPDFTWE VK LK
Sbjct:  249 LTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYKTGKIPDKDILDLIKENFDFRPGMIAINLDLKRGGNFRFQKTAAYGHFGRDDPDFTWETVKLLK 387          
BLAST of CF835163 vs. ExPASy Swiss-Prot
Match: METK_MESCR (S-adenosylmethionine synthetase OS=Mesembryanthemum crystallinum GN=METK PE=2 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 4.332e-59
Identity = 116/144 (80.56%), Postives = 123/144 (85.42%), Query Frame = -3
Query:  224 LTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKPLKWEKLQ 655
            LTGRKIIIDTY            GKDPTKVDRSGAYI RQAAKSIVA+GLARRCIVQ+SYAIGV EPLSVFVD+YGTGKI DK+ILKIVKE FDFRPGMI+ NLDL RGGN R+LKTAAYGHFGRDD DFTWE+VKPLKWEK Q
Sbjct:  249 LTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQAAKSIVAAGLARRCIVQISYAIGVAEPLSVFVDTYGTGKISDKDILKIVKETFDFRPGMIANNLDLLRGGN-RYLKTAAYGHFGRDDADFTWEVVKPLKWEKPQ 391          
BLAST of CF835163 vs. ExPASy Swiss-Prot
Match: METK4_POPTR (S-adenosylmethionine synthetase 4 OS=Populus trichocarpa GN=METK4 PE=2 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.260e-58
Identity = 112/139 (80.58%), Postives = 121/139 (87.05%), Query Frame = -3
Query:  239 LTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKPLK 655
            LTGRKIIIDTY            GKDPTKVDRSGAYIVRQAAKS+VASGLARRCIVQVSYAIGVPEPLSVFVD+Y TGKIPD++IL+++KENFDFRPGMI+INLDL RGGN R+ KTAAYGHFGRDDPDFTWE VK LK
Sbjct:  249 LTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVPEPLSVFVDTYKTGKIPDRDILELIKENFDFRPGMIAINLDLMRGGNSRYQKTAAYGHFGRDDPDFTWETVKLLK 387          
BLAST of CF835163 vs. ExPASy Swiss-Prot
Match: METK3_ARATH (S-adenosylmethionine synthetase 3 OS=Arabidopsis thaliana GN=METK3 PE=1 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.260e-58
Identity = 112/139 (80.58%), Postives = 121/139 (87.05%), Query Frame = -3
Query:  239 LTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKPLK 655
            LTGRKIIIDTY            GKDPTKVDRSGAYIVRQAAKS+VA+GLARRCIVQVSYAIGVPEPLSVFVD+Y TG IPDK+IL ++KE FDFRPGM++INLDLKRGGN RF KTAAYGHFGRDDPDFTWE+VKPLK
Sbjct:  249 LTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVAAGLARRCIVQVSYAIGVPEPLSVFVDTYKTGTIPDKDILVLIKEAFDFRPGMMAINLDLKRGGNFRFQKTAAYGHFGRDDPDFTWEVVKPLK 387          
BLAST of CF835163 vs. ExPASy Swiss-Prot
Match: METK4_BRAJU (S-adenosylmethionine synthetase 4 OS=Brassica juncea GN=MSAMS4 PE=2 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.646e-58
Identity = 111/139 (79.86%), Postives = 121/139 (87.05%), Query Frame = -3
Query:  239 LTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKPLK 655
            LTGRKIIIDTY            GKDPTKVDRSGAYIVRQAAKS+VA+GLARRCIVQVSYAIGVPEPLSVFVD+Y TG IPDK+IL ++KE FDFRPGM++INLDLKRGGN RF KTAAYGHFGRDDPDFTWE++KPLK
Sbjct:  249 LTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVATGLARRCIVQVSYAIGVPEPLSVFVDTYKTGTIPDKDILVLIKEAFDFRPGMMAINLDLKRGGNFRFQKTAAYGHFGRDDPDFTWEVIKPLK 387          
BLAST of CF835163 vs. ExPASy Swiss-Prot
Match: METK2_ACTCH (S-adenosylmethionine synthetase 2 OS=Actinidia chinensis GN=SAM2 PE=2 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 2.377e-57
Identity = 111/139 (79.86%), Postives = 119/139 (85.61%), Query Frame = -3
Query:  239 LTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKPLK 655
            LTGRKIIIDTY            GKDPTKVDRSGAY+VRQAAKS+VASGLARRCIVQVSYAIGVPEPLSVFVD+Y TGKIPDK+IL ++KENFDFRPGMI+INLDLKRGGN R+ KTAAYGHFGRDD D TWE VK LK
Sbjct:  249 LTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYVVRQAAKSVVASGLARRCIVQVSYAIGVPEPLSVFVDTYKTGKIPDKDILALIKENFDFRPGMIAINLDLKRGGNFRYQKTAAYGHFGRDDADLTWETVKILK 387          
The following BLAST results are available for this feature:
BLAST of CF835163 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK2_DIACA2.297e-6080.69S-adenosylmethionine synthetase 2 OS=Dianthus cary... [more]
METK1_PICSI3.918e-6081.25S-adenosylmethionine synthetase 1 OS=Picea sitchen... [more]
METK1_VITVI8.728e-6081.69S-adenosylmethionine synthetase 1 OS=Vitis vinifer... [more]
METK_MUSAC1.140e-5982.39S-adenosylmethionine synthetase OS=Musa acuminata ... [more]
METK3_VITVI3.317e-5982.01S-adenosylmethionine synthetase 3 OS=Vitis vinifer... [more]
METK_MESCR4.332e-5980.56S-adenosylmethionine synthetase OS=Mesembryanthemu... [more]
METK4_POPTR1.260e-5880.58S-adenosylmethionine synthetase 4 OS=Populus trich... [more]
METK3_ARATH1.260e-5880.58S-adenosylmethionine synthetase 3 OS=Arabidopsis t... [more]
METK4_BRAJU1.646e-5879.86S-adenosylmethionine synthetase 4 OS=Brassica junc... [more]
METK2_ACTCH2.377e-5779.86S-adenosylmethionine synthetase 2 OS=Actinidia chi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06M13_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06M13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835163 ID=CF835163; Name=CF835163; organism=Citrus sinensis; type=EST; length=657bp
TTGGTTTACCCTTAAGAGAATTTCAGAACAATTCATATTCGCCTCTCCCC
CCATTATGCCTTGGATTGAGAATCCATTAAACATATTTATTAAAAAAAAA
GGGGAAAAGAAGAAGAAAGAAAGAAAGAAAACATTCATGTAACTGAAACA
GAAGTAAAAAAGAAAAGTAGACATATATAAGCACCAATGAGAGGCCAGCA
GCTCATCCTTGATTAGTTTAAGCTTGAAGTTTCTCCCACTTGAGTGGCTT
AACAATCTCCCAAGTGAAATCAGGATCATCTCTGCCAAAGTGCCCATAAG
CGGCAGTCTTCAAGAACCTGCCGTTGCCACCCCTCTTGAGATCAAGATTA
ATAGAAATCATCCCAGGCCTAAAATCAAAATTCTCCTTCACAATCTTCAA
AATTTCCTTGTCAGGGATCTTCCCAGTCCCATAACTATCAACAAAAACTG
ACAAAGGCTCGGGCACACCAATAGCGTAAGAAACCTGAACAATGCATCTC
CTGGCAAGCCCGCTTGCCACAATACTCTTAGCAGCTTGCCTTACAATGTA
AGCACCGCTTCTATCAACCTTGGTAGGATCTTTCCCTGAGAAAGCCCCAC
CACCGTGTGCCCCCCAGCCACCATAAGTATCAATAATAATCTTCCGGCCG
GTGAGCC
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