CF835163

Overview
NameCF835163
Unique NameCF835163
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length657
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835163 vs. ExPASy Swiss-Prot
Match: METK_COXB2 (S-adenosylmethionine synthetase OS=Coxiella burnetii (strain CbuG_Q212) GN=metK PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 9.717e-35
Identity = 75/133 (56.39%), Postives = 93/133 (69.92%), Query Frame = -3
Query:  257 LTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 655
            LTGRKII+DTY            GKDP+KVDRSGAY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GTGKI +  I +++KE+FD RPG I   L+L R     +  TA YGHFGR++P+FTWE
Sbjct:  243 LTGRKIIVDTYGGMARHGGGCFSGKDPSKVDRSGAYAARYVAKNIVAGGLADRCEIQVSYAIGVAEPTSISVETFGTGKIDEVRIQQLIKEHFDLRPGKIIEELNLLR---SIYKATATYGHFGREEPEFTWE 372          
BLAST of CF835163 vs. ExPASy Swiss-Prot
Match: METK_COXB1 (S-adenosylmethionine synthetase OS=Coxiella burnetii (strain CbuK_Q154) GN=metK PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 9.717e-35
Identity = 75/133 (56.39%), Postives = 93/133 (69.92%), Query Frame = -3
Query:  257 LTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 655
            LTGRKII+DTY            GKDP+KVDRSGAY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GTGKI +  I +++KE+FD RPG I   L+L R     +  TA YGHFGR++P+FTWE
Sbjct:  243 LTGRKIIVDTYGGMARHGGGCFSGKDPSKVDRSGAYAARYVAKNIVAGGLADRCEIQVSYAIGVAEPTSISVETFGTGKIDEVRIQQLIKEHFDLRPGKIIEELNLLR---SIYKATATYGHFGREEPEFTWE 372          
BLAST of CF835163 vs. ExPASy Swiss-Prot
Match: METK_CELJU (S-adenosylmethionine synthetase OS=Cellvibrio japonicus (strain Ueda107) GN=metK PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 9.717e-35
Identity = 75/133 (56.39%), Postives = 97/133 (72.93%), Query Frame = -3
Query:  257 LTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 655
            LTGRKII+D+Y            GKDP+KVDRS AY  R  AK+IVA+GLA +C +QVSYAIGV EP S+ ++++GTGK+PD EI+K+V+E+FD RP  +   L+LKR     + +TAAYGHFGR+ PDFTWE
Sbjct:  243 LTGRKIIVDSYGGMARHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLADKCEIQVSYAIGVAEPTSISINTFGTGKLPDAEIIKLVREHFDLRPRGLIEMLNLKR---PIYRQTAAYGHFGRELPDFTWE 372          
BLAST of CF835163 vs. ExPASy Swiss-Prot
Match: METK_NITEU (S-adenosylmethionine synthetase OS=Nitrosomonas europaea GN=metK PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.269e-34
Identity = 75/133 (56.39%), Postives = 94/133 (70.68%), Query Frame = -3
Query:  257 LTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 655
            LTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA+GLAR+C VQV+YAIGV +P+S+ V ++GTGKIPD ++ +++  +FD RP  I   LDL R   G   KTAAYGHFGR++P FTWE
Sbjct:  244 LTGRKIIVDTYGGTAHHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLARKCEVQVAYAIGVAKPVSLMVQTFGTGKIPDGKLAELIARHFDLRPRAIIHELDLLRPIYG---KTAAYGHFGREEPSFTWE 373          
BLAST of CF835163 vs. ExPASy Swiss-Prot
Match: METK_TERTT (S-adenosylmethionine synthetase OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=metK PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.658e-34
Identity = 78/134 (58.21%), Postives = 96/134 (71.64%), Query Frame = -3
Query:  254 LTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEI 655
            LTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA+GLA RC +QVSYAIGV EP S+ V+++GTGKI D +I+++VKE+FD RP  +   LDL R     + KTAAYGHFGR+ P+FTWEI
Sbjct:  243 LTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLADRCEIQVSYAIGVAEPTSISVNTFGTGKIDDGKIVELVKEHFDLRPRGLIEMLDLMR---PIYRKTAAYGHFGRELPEFTWEI 373          
BLAST of CF835163 vs. ExPASy Swiss-Prot
Match: METK_LARHH (S-adenosylmethionine synthetase OS=Laribacter hongkongensis (strain HLHK9) GN=metK PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.658e-34
Identity = 75/133 (56.39%), Postives = 96/133 (72.18%), Query Frame = -3
Query:  257 LTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 655
            LTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA+GLAR+C +QVSYAIG+ EP S+ VD++GT  IP+++I+++VK +FD RP  I   LDL R     + KTAAYGHFGR++P+FTWE
Sbjct:  246 LTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLARQCQIQVSYAIGIAEPTSISVDTFGTNAIPNEKIVELVKRHFDLRPKGIIQMLDLLR---PIYTKTAAYGHFGREEPEFTWE 375          
BLAST of CF835163 vs. ExPASy Swiss-Prot
Match: METK5_CAEEL (Probable S-adenosylmethionine synthetase 5 OS=Caenorhabditis elegans GN=sams-5 PE=2 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 1.658e-34
Identity = 81/142 (57.04%), Postives = 95/142 (66.90%), Query Frame = -3
Query:  230 LTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKPLKWEK 655
            LTGRKII+DTY            GKDPTKVDRS AY  R  AKS+V +GL RRC+VQVSYAIGV +PLSV V S+GT  + + E+LKIV +NFD RPGMI  NLDLKR     +  TA  GHFG +  DF WE  + LK +K
Sbjct:  249 LTGRKIIVDTYGGWGAHGGGAFSGKDPTKVDRSAAYAARWVAKSLVKAGLCRRCLVQVSYAIGVAKPLSVMVFSFGTSALNEAELLKIVNDNFDLRPGMIIKNLDLKR---AIYEPTAENGHFGHN--DFPWEQARKLKIDK 385          
BLAST of CF835163 vs. ExPASy Swiss-Prot
Match: METK_FERNB (S-adenosylmethionine synthetase OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=metK PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.165e-34
Identity = 75/142 (52.82%), Postives = 100/142 (70.42%), Query Frame = -3
Query:  239 LTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE---IVKPLK 655
            LTGRKII+DTY            GKDPTKVDRS  Y  R  AK++VA+GLA + ++QV+YAIGV  P+S+ ++++GT K+ ++++ K+V+E FDFRPG I   LDL R     + KTAAYGHFGR+DPDFTWE   +V+ LK
Sbjct:  253 LTGRKIIVDTYGGAIPHGGGAFSGKDPTKVDRSAHYFARYVAKNVVAAGLADKFMIQVAYAIGVARPVSIMINTFGTAKVDEEKLRKVVEEIFDFRPGAIIKKLDLLR---PIYRKTAAYGHFGRNDPDFTWERTDMVRELK 391          
BLAST of CF835163 vs. ExPASy Swiss-Prot
Match: METK_CLOCE (S-adenosylmethionine synthetase OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=metK PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.165e-34
Identity = 74/133 (55.64%), Postives = 96/133 (72.18%), Query Frame = -3
Query:  257 LTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 655
            LTGRKII+DTY            GKDPTKVDRS AY  R  AK+IVASG+AR+C VQ++YAIGV +P+SV VD++GT  IP+++I ++V ++FD RP  I   L+L+R     + KTAAYGHFGRDD +F+WE
Sbjct:  253 LTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARYVAKNIVASGIARKCEVQLAYAIGVAKPVSVLVDTFGTAVIPEEKISELVNKHFDLRPAAIINKLNLRR---PIYRKTAAYGHFGRDDAEFSWE 382          
BLAST of CF835163 vs. ExPASy Swiss-Prot
Match: METK_BORPE (S-adenosylmethionine synthetase OS=Bordetella pertussis GN=metK PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.165e-34
Identity = 76/133 (57.14%), Postives = 95/133 (71.43%), Query Frame = -3
Query:  257 LTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 655
            LTGRKII+DTY            GKDP+KVDRS AY  R  AK++VA+GLAR+C VQVSYAIGV EP+++ V + GTG IPD++I K+V+E+FD RP  I   LDL R     + KTAAYGHFGR +P+F+WE
Sbjct:  246 LTGRKIIVDTYGGACPHGGGAFSGKDPSKVDRSAAYAARYVAKNVVAAGLARQCQVQVSYAIGVAEPINITVYTEGTGVIPDEQIAKLVREHFDLRPKGIVNMLDLLR---PIYTKTAAYGHFGRSEPEFSWE 375          
The following BLAST results are available for this feature:
BLAST of CF835163 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_COXB29.717e-3556.39S-adenosylmethionine synthetase OS=Coxiella burnet... [more]
METK_COXB19.717e-3556.39S-adenosylmethionine synthetase OS=Coxiella burnet... [more]
METK_CELJU9.717e-3556.39S-adenosylmethionine synthetase OS=Cellvibrio japo... [more]
METK_NITEU1.269e-3456.39S-adenosylmethionine synthetase OS=Nitrosomonas eu... [more]
METK_TERTT1.658e-3458.21S-adenosylmethionine synthetase OS=Teredinibacter ... [more]
METK_LARHH1.658e-3456.39S-adenosylmethionine synthetase OS=Laribacter hong... [more]
METK5_CAEEL1.658e-3457.04Probable S-adenosylmethionine synthetase 5 OS=Caen... [more]
METK_FERNB2.165e-3452.82S-adenosylmethionine synthetase OS=Fervidobacteriu... [more]
METK_CLOCE2.165e-3455.64S-adenosylmethionine synthetase OS=Clostridium cel... [more]
METK_BORPE2.165e-3457.14S-adenosylmethionine synthetase OS=Bordetella pert... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06M13_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06M13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835163 ID=CF835163; Name=CF835163; organism=Citrus sinensis; type=EST; length=657bp
TTGGTTTACCCTTAAGAGAATTTCAGAACAATTCATATTCGCCTCTCCCC
CCATTATGCCTTGGATTGAGAATCCATTAAACATATTTATTAAAAAAAAA
GGGGAAAAGAAGAAGAAAGAAAGAAAGAAAACATTCATGTAACTGAAACA
GAAGTAAAAAAGAAAAGTAGACATATATAAGCACCAATGAGAGGCCAGCA
GCTCATCCTTGATTAGTTTAAGCTTGAAGTTTCTCCCACTTGAGTGGCTT
AACAATCTCCCAAGTGAAATCAGGATCATCTCTGCCAAAGTGCCCATAAG
CGGCAGTCTTCAAGAACCTGCCGTTGCCACCCCTCTTGAGATCAAGATTA
ATAGAAATCATCCCAGGCCTAAAATCAAAATTCTCCTTCACAATCTTCAA
AATTTCCTTGTCAGGGATCTTCCCAGTCCCATAACTATCAACAAAAACTG
ACAAAGGCTCGGGCACACCAATAGCGTAAGAAACCTGAACAATGCATCTC
CTGGCAAGCCCGCTTGCCACAATACTCTTAGCAGCTTGCCTTACAATGTA
AGCACCGCTTCTATCAACCTTGGTAGGATCTTTCCCTGAGAAAGCCCCAC
CACCGTGTGCCCCCCAGCCACCATAAGTATCAATAATAATCTTCCGGCCG
GTGAGCC
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