CF835164

Overview
NameCF835164
Unique NameCF835164
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length548
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835164 vs. ExPASy Swiss-Prot
Match: METK_GEOKA (S-adenosylmethionine synthetase OS=Geobacillus kaustophilus GN=metK PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 4.038e-32
Identity = 67/110 (60.91%), Postives = 81/110 (73.64%), Query Frame = 1
Query:  202 LFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMDMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKR 531
            LFTSESV EGHPDK+CDQ+SDA+LDA L +DP+++VACET   T + +V GEITT   VD  +IVRDT R IG+T A  G DAD C VL +I++QSPDIA GV   L  R
Sbjct:    7 LFTSESVTEGHPDKICDQISDAILDAILEKDPNARVACETSVTTGLVLVSGEITTSTYVDIPRIVRDTVREIGYTRAKYGFDADTCAVLTSIDEQSPDIAMGVDRALEAR 116          
BLAST of CF835164 vs. ExPASy Swiss-Prot
Match: METK_GEOMG (S-adenosylmethionine synthetase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=metK PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 6.887e-32
Identity = 64/107 (59.81%), Postives = 85/107 (79.44%), Query Frame = 1
Query:  190 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMDMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGV 510
            M+ ++FTSESV+EGHPDK+ DQVSD++LDA LAQDP ++VACET   T M ++ GEITT A VDY K+VR+T R IG+  + +G D + C VLV+I++QSPDI+QGV
Sbjct:    3 MKDYIFTSESVSEGHPDKVADQVSDSILDAILAQDPRARVACETLVTTGMAVIAGEITTSAVVDYPKVVRETIREIGYNDSAMGFDWETCAVLVSIDKQSPDISQGV 109          
BLAST of CF835164 vs. ExPASy Swiss-Prot
Match: METK_SYNSC (S-adenosylmethionine synthetase OS=Synechococcus sp. (strain CC9605) GN=metK PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 8.995e-32
Identity = 66/109 (60.55%), Postives = 84/109 (77.06%), Query Frame = 1
Query:  190 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMDMVFGEITTKANVDYEKIVRDTCRSIGFTSADV-GLDADHCKVLVNIEQQSPDIAQGVH 513
            M  ++FTSESV EGHPDK+CDQVSDAVLDA LAQDP S+VACET   T + M+ GE+T+KA VD+  +VR+  + IG++ A   G DA+ C VLV ++QQSPDIAQGV+
Sbjct:    1 MSRYVFTSESVTEGHPDKICDQVSDAVLDALLAQDPSSRVACETVVNTGLCMITGEVTSKAQVDFIHLVRNVIKEIGYSGARAGGFDANSCAVLVALDQQSPDIAQGVN 109          
BLAST of CF835164 vs. ExPASy Swiss-Prot
Match: METK_SHEB9 (S-adenosylmethionine synthetase OS=Shewanella baltica (strain OS195) GN=metK PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 8.995e-32
Identity = 69/107 (64.49%), Postives = 81/107 (75.70%), Query Frame = 1
Query:  190 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMDMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGV 510
            M   LFTSESV+EGHPDK+ DQ+SDAVLDA LAQDP ++VACET  KT M +V GE+TT A VD E+I R T R IG+T +D+G DAD C VL  I +QSPDI QGV
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILAQDPKARVACETYVKTGMVLVGGEVTTSAWVDIEEITRKTVREIGYTHSDMGFDADSCAVLNAIGKQSPDINQGV 107          
BLAST of CF835164 vs. ExPASy Swiss-Prot
Match: METK_SHEB8 (S-adenosylmethionine synthetase OS=Shewanella baltica (strain OS185) GN=metK PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 8.995e-32
Identity = 69/107 (64.49%), Postives = 81/107 (75.70%), Query Frame = 1
Query:  190 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMDMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGV 510
            M   LFTSESV+EGHPDK+ DQ+SDAVLDA LAQDP ++VACET  KT M +V GE+TT A VD E+I R T R IG+T +D+G DAD C VL  I +QSPDI QGV
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILAQDPKARVACETYVKTGMVLVGGEVTTSAWVDIEEITRKTVREIGYTHSDMGFDADSCAVLNAIGKQSPDINQGV 107          
BLAST of CF835164 vs. ExPASy Swiss-Prot
Match: METK_SHEB5 (S-adenosylmethionine synthetase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=metK PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 8.995e-32
Identity = 69/107 (64.49%), Postives = 81/107 (75.70%), Query Frame = 1
Query:  190 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMDMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGV 510
            M   LFTSESV+EGHPDK+ DQ+SDAVLDA LAQDP ++VACET  KT M +V GE+TT A VD E+I R T R IG+T +D+G DAD C VL  I +QSPDI QGV
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILAQDPKARVACETYVKTGMVLVGGEVTTSAWVDIEEITRKTVREIGYTHSDMGFDADSCAVLNAIGKQSPDINQGV 107          
BLAST of CF835164 vs. ExPASy Swiss-Prot
Match: METK_SHEB2 (S-adenosylmethionine synthetase OS=Shewanella baltica (strain OS223) GN=metK PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 8.995e-32
Identity = 69/107 (64.49%), Postives = 81/107 (75.70%), Query Frame = 1
Query:  190 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMDMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGV 510
            M   LFTSESV+EGHPDK+ DQ+SDAVLDA LAQDP ++VACET  KT M +V GE+TT A VD E+I R T R IG+T +D+G DAD C VL  I +QSPDI QGV
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILAQDPKARVACETYVKTGMVLVGGEVTTSAWVDIEEITRKTVREIGYTHSDMGFDADSCAVLNAIGKQSPDINQGV 107          
BLAST of CF835164 vs. ExPASy Swiss-Prot
Match: METK_RHOBA (S-adenosylmethionine synthetase OS=Rhodopirellula baltica GN=metK PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 8.995e-32
Identity = 62/105 (59.05%), Postives = 84/105 (80.00%), Query Frame = 1
Query:  199 FLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMDMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVH 513
            FLFTSESV+ GHPDKL D++SD++LDA LAQDP S+VACET   T + ++ GEI++KA+VDYEKIVRDT  ++G+   D+G+D   C+V + ++ QSPDIAQGV+
Sbjct:    8 FLFTSESVSMGHPDKLADRISDSILDALLAQDPHSRVACETLVTTGLAVIAGEISSKADVDYEKIVRDTIVAVGYDDPDIGIDGKTCEVQIRLDAQSPDIAQGVN 112          
BLAST of CF835164 vs. ExPASy Swiss-Prot
Match: METK_GEOTN (S-adenosylmethionine synthetase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=metK PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 8.995e-32
Identity = 67/110 (60.91%), Postives = 80/110 (72.73%), Query Frame = 1
Query:  202 LFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMDMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKR 531
            LFTSESV EGHPDK+CDQ+SDA+LDA L +DP+++VACET   T + +V GEITT   VD  +IVRDT R IG+T A  G DAD C VL  I++QSPDIA GV   L  R
Sbjct:    7 LFTSESVTEGHPDKICDQISDAILDAILEKDPNARVACETSVTTGLVLVSGEITTSTYVDIPRIVRDTVREIGYTRAKFGFDADTCAVLTAIDEQSPDIAMGVDQALEAR 116          
BLAST of CF835164 vs. ExPASy Swiss-Prot
Match: METK_SYNPX (S-adenosylmethionine synthetase OS=Synechococcus sp. (strain WH8102) GN=metK PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.175e-31
Identity = 66/108 (61.11%), Postives = 83/108 (76.85%), Query Frame = 1
Query:  190 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMDMVFGEITTKANVDYEKIVRDTCRSIGFTSADV-GLDADHCKVLVNIEQQSPDIAQGV 510
            M  ++FTSESV EGHPDK+CDQVSDAVLDA LAQDP S+VACET   T + M+ GE+T+KA VD+  +VR+  + IG++ A   G DA+ C VLV ++QQSPDIAQGV
Sbjct:    1 MSRYVFTSESVTEGHPDKICDQVSDAVLDALLAQDPSSRVACETVVNTGLCMITGEVTSKAQVDFIHLVRNVIKEIGYSGARAGGFDANSCAVLVALDQQSPDIAQGV 108          
The following BLAST results are available for this feature:
BLAST of CF835164 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_GEOKA4.038e-3260.91S-adenosylmethionine synthetase OS=Geobacillus kau... [more]
METK_GEOMG6.887e-3259.81S-adenosylmethionine synthetase OS=Geobacter metal... [more]
METK_SYNSC8.995e-3260.55S-adenosylmethionine synthetase OS=Synechococcus s... [more]
METK_SHEB98.995e-3264.49S-adenosylmethionine synthetase OS=Shewanella balt... [more]
METK_SHEB88.995e-3264.49S-adenosylmethionine synthetase OS=Shewanella balt... [more]
METK_SHEB58.995e-3264.49S-adenosylmethionine synthetase OS=Shewanella balt... [more]
METK_SHEB28.995e-3264.49S-adenosylmethionine synthetase OS=Shewanella balt... [more]
METK_RHOBA8.995e-3259.05S-adenosylmethionine synthetase OS=Rhodopirellula ... [more]
METK_GEOTN8.995e-3260.91S-adenosylmethionine synthetase OS=Geobacillus the... [more]
METK_SYNPX1.175e-3161.11S-adenosylmethionine synthetase OS=Synechococcus s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06M13_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06M13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835164 ID=CF835164; Name=CF835164; organism=Citrus sinensis; type=EST; length=548bp
GAAACTACAAATCCTTGCTGCCGTTTTACCTCCTCTCTCTCTTCTCTCAG
CGTATGCATATCGGCTTTCTCTCGTTCTTCTGGGTACTTACCATTTTCGT
ATATCACCACCTTCAATTCCATTTGTACTCGCACCACGGCCTCCTGCAAA
GCGAAAGCTGCAGCTTCAGGTTAAATCAAATTAAAGAAAATGGAAACATT
TCTTTTCACATCAGAATCAGTGAACGAGGGTCACCCGGACAAGCTGTGTG
ACCAAGTTTCGGACGCAGTACTGGACGCGTGTTTGGCTCAGGATCCTGAC
AGCAAAGTTGCTTGTGAAACATGCACAAAGACCAACATGGACATGGTTTT
TGGAGAAATTACAACCAAGGCCAATGTGGATTACGAGAAAATCGTGCGTG
ATACATGCAGATCGATTGGGTTCACATCGGCCGATGTGGGGCTTGATGCT
GATCACTGCAAAGTTCTTGTTAATATTGAGCAGCAAAGCCCTGACATTGC
TCAGGGTGTTCATGGGCATCTCACAAAGCGGCCTGAGGAGATTGGTGC
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