CF835164

Overview
NameCF835164
Unique NameCF835164
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length548
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835164 vs. ExPASy Swiss-Prot
Match: METK_STAAM (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=metK PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 4.620e-28
Identity = 61/113 (53.98%), Postives = 79/113 (69.91%), Query Frame = 1
Query:  202 LFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMDMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEE 540
            LFTSESV EGHPDK+ DQVSDA+LDA L  DP+++VACET   T M ++ GEI+T   VD  K+VR+T + IG+T A  G D +   +L  I++QSPDIAQGV   L  R ++
Sbjct:    7 LFTSESVTEGHPDKIADQVSDAILDAILKDDPNARVACETTVTTGMALIAGEISTTTYVDIPKVVRETIKEIGYTRAKYGYDYETMAILTAIDEQSPDIAQGVDKALEYRDKD 119          
BLAST of CF835164 vs. ExPASy Swiss-Prot
Match: METK_STAAE (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain Newman) GN=metK PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 4.620e-28
Identity = 61/113 (53.98%), Postives = 79/113 (69.91%), Query Frame = 1
Query:  202 LFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMDMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEE 540
            LFTSESV EGHPDK+ DQVSDA+LDA L  DP+++VACET   T M ++ GEI+T   VD  K+VR+T + IG+T A  G D +   +L  I++QSPDIAQGV   L  R ++
Sbjct:    7 LFTSESVTEGHPDKIADQVSDAILDAILKDDPNARVACETTVTTGMALIAGEISTTTYVDIPKVVRETIKEIGYTRAKYGYDYETMAILTAIDEQSPDIAQGVDKALEYRDKD 119          
BLAST of CF835164 vs. ExPASy Swiss-Prot
Match: METK_STAAC (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain COL) GN=metK PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 4.620e-28
Identity = 61/113 (53.98%), Postives = 79/113 (69.91%), Query Frame = 1
Query:  202 LFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMDMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEE 540
            LFTSESV EGHPDK+ DQVSDA+LDA L  DP+++VACET   T M ++ GEI+T   VD  K+VR+T + IG+T A  G D +   +L  I++QSPDIAQGV   L  R ++
Sbjct:    7 LFTSESVTEGHPDKIADQVSDAILDAILKDDPNARVACETTVTTGMALIAGEISTTTYVDIPKVVRETIKEIGYTRAKYGYDYETMAILTAIDEQSPDIAQGVDKALEYRDKD 119          
BLAST of CF835164 vs. ExPASy Swiss-Prot
Match: METK_STAAB (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=metK PE=3 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 4.620e-28
Identity = 61/113 (53.98%), Postives = 79/113 (69.91%), Query Frame = 1
Query:  202 LFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMDMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEE 540
            LFTSESV EGHPDK+ DQVSDA+LDA L  DP+++VACET   T M ++ GEI+T   VD  K+VR+T + IG+T A  G D +   +L  I++QSPDIAQGV   L  R ++
Sbjct:    7 LFTSESVTEGHPDKIADQVSDAILDAILKDDPNARVACETTVTTGMALIAGEISTTTYVDIPKVVRETIKEIGYTRAKYGYDYETMAILTAIDEQSPDIAQGVDKALEYRDKD 119          
BLAST of CF835164 vs. ExPASy Swiss-Prot
Match: METK_STAA9 (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain JH9) GN=metK PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 4.620e-28
Identity = 61/113 (53.98%), Postives = 79/113 (69.91%), Query Frame = 1
Query:  202 LFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMDMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEE 540
            LFTSESV EGHPDK+ DQVSDA+LDA L  DP+++VACET   T M ++ GEI+T   VD  K+VR+T + IG+T A  G D +   +L  I++QSPDIAQGV   L  R ++
Sbjct:    7 LFTSESVTEGHPDKIADQVSDAILDAILKDDPNARVACETTVTTGMALIAGEISTTTYVDIPKVVRETIKEIGYTRAKYGYDYETMAILTAIDEQSPDIAQGVDKALEYRDKD 119          
BLAST of CF835164 vs. ExPASy Swiss-Prot
Match: METK_STAA8 (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain NCTC 8325) GN=metK PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 4.620e-28
Identity = 61/113 (53.98%), Postives = 79/113 (69.91%), Query Frame = 1
Query:  202 LFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMDMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEE 540
            LFTSESV EGHPDK+ DQVSDA+LDA L  DP+++VACET   T M ++ GEI+T   VD  K+VR+T + IG+T A  G D +   +L  I++QSPDIAQGV   L  R ++
Sbjct:    7 LFTSESVTEGHPDKIADQVSDAILDAILKDDPNARVACETTVTTGMALIAGEISTTTYVDIPKVVRETIKEIGYTRAKYGYDYETMAILTAIDEQSPDIAQGVDKALEYRDKD 119          
BLAST of CF835164 vs. ExPASy Swiss-Prot
Match: METK_STAA3 (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain USA300) GN=metK PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 4.620e-28
Identity = 61/113 (53.98%), Postives = 79/113 (69.91%), Query Frame = 1
Query:  202 LFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMDMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEE 540
            LFTSESV EGHPDK+ DQVSDA+LDA L  DP+++VACET   T M ++ GEI+T   VD  K+VR+T + IG+T A  G D +   +L  I++QSPDIAQGV   L  R ++
Sbjct:    7 LFTSESVTEGHPDKIADQVSDAILDAILKDDPNARVACETTVTTGMALIAGEISTTTYVDIPKVVRETIKEIGYTRAKYGYDYETMAILTAIDEQSPDIAQGVDKALEYRDKD 119          
BLAST of CF835164 vs. ExPASy Swiss-Prot
Match: METK_STAA2 (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain JH1) GN=metK PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 4.620e-28
Identity = 61/113 (53.98%), Postives = 79/113 (69.91%), Query Frame = 1
Query:  202 LFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMDMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEE 540
            LFTSESV EGHPDK+ DQVSDA+LDA L  DP+++VACET   T M ++ GEI+T   VD  K+VR+T + IG+T A  G D +   +L  I++QSPDIAQGV   L  R ++
Sbjct:    7 LFTSESVTEGHPDKIADQVSDAILDAILKDDPNARVACETTVTTGMALIAGEISTTTYVDIPKVVRETIKEIGYTRAKYGYDYETMAILTAIDEQSPDIAQGVDKALEYRDKD 119          
BLAST of CF835164 vs. ExPASy Swiss-Prot
Match: METK_STAA1 (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=metK PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 4.620e-28
Identity = 61/113 (53.98%), Postives = 79/113 (69.91%), Query Frame = 1
Query:  202 LFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMDMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEE 540
            LFTSESV EGHPDK+ DQVSDA+LDA L  DP+++VACET   T M ++ GEI+T   VD  K+VR+T + IG+T A  G D +   +L  I++QSPDIAQGV   L  R ++
Sbjct:    7 LFTSESVTEGHPDKIADQVSDAILDAILKDDPNARVACETTVTTGMALIAGEISTTTYVDIPKVVRETIKEIGYTRAKYGYDYETMAILTAIDEQSPDIAQGVDKALEYRDKD 119          
BLAST of CF835164 vs. ExPASy Swiss-Prot
Match: METK_PSEPF (S-adenosylmethionine synthetase OS=Pseudomonas fluorescens (strain Pf0-1) GN=metK PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 4.620e-28
Identity = 67/118 (56.78%), Postives = 83/118 (70.34%), Query Frame = 1
Query:  193 ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMDMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIG 546
            E  LFTSESV+EGHPDK+ DQ+SDAVLDA +AQD  ++VA ET  KT + +V GE+TT A VD E+IVRD    IG+TS+DVG D   C V+  I +QSPDI QGV      +PE+ G
Sbjct:    3 EYSLFTSESVSEGHPDKIADQISDAVLDAIIAQDKHARVAVETLVKTGVAIVAGEVTTSAWVDLEQIVRDVICDIGYTSSDVGFDGATCGVMNIIGKQSPDINQGVD---RAKPEDQG 117          
The following BLAST results are available for this feature:
BLAST of CF835164 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_STAAM4.620e-2853.98S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAAE4.620e-2853.98S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAAC4.620e-2853.98S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAAB4.620e-2853.98S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAA94.620e-2853.98S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAA84.620e-2853.98S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAA34.620e-2853.98S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAA24.620e-2853.98S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAA14.620e-2853.98S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_PSEPF4.620e-2856.78S-adenosylmethionine synthetase OS=Pseudomonas flu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06M13_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06M13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835164 ID=CF835164; Name=CF835164; organism=Citrus sinensis; type=EST; length=548bp
GAAACTACAAATCCTTGCTGCCGTTTTACCTCCTCTCTCTCTTCTCTCAG
CGTATGCATATCGGCTTTCTCTCGTTCTTCTGGGTACTTACCATTTTCGT
ATATCACCACCTTCAATTCCATTTGTACTCGCACCACGGCCTCCTGCAAA
GCGAAAGCTGCAGCTTCAGGTTAAATCAAATTAAAGAAAATGGAAACATT
TCTTTTCACATCAGAATCAGTGAACGAGGGTCACCCGGACAAGCTGTGTG
ACCAAGTTTCGGACGCAGTACTGGACGCGTGTTTGGCTCAGGATCCTGAC
AGCAAAGTTGCTTGTGAAACATGCACAAAGACCAACATGGACATGGTTTT
TGGAGAAATTACAACCAAGGCCAATGTGGATTACGAGAAAATCGTGCGTG
ATACATGCAGATCGATTGGGTTCACATCGGCCGATGTGGGGCTTGATGCT
GATCACTGCAAAGTTCTTGTTAATATTGAGCAGCAAAGCCCTGACATTGC
TCAGGGTGTTCATGGGCATCTCACAAAGCGGCCTGAGGAGATTGGTGC
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