CF835164

Overview
NameCF835164
Unique NameCF835164
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length548
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835164 vs. ExPASy Swiss-Prot
Match: METK_SYNY3 (S-adenosylmethionine synthetase OS=Synechocystis sp. (strain PCC 6803) GN=metK PE=3 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 6.034e-28
Identity = 55/104 (52.88%), Postives = 80/104 (76.92%), Query Frame = 1
Query:  199 FLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMDMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGV 510
            +LFTSESV EGHPDK+CDQ+SD +LDA L  DP+S+VA ET   T + +V GEIT++A++++ +++R     IG+T+AD G  A+ C V++ I++QSPDI+QGV
Sbjct:   11 YLFTSESVTEGHPDKVCDQISDTILDALLTLDPNSRVAAETVVNTGLTLVTGEITSQAHINFVELIRQKIAEIGYTNADNGYSANSCAVMLAIDEQSPDISQGV 114          
BLAST of CF835164 vs. ExPASy Swiss-Prot
Match: METK_STRPM (S-adenosylmethionine synthetase OS=Streptococcus pyogenes serotype M28 GN=metK PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 6.034e-28
Identity = 62/113 (54.87%), Postives = 80/113 (70.80%), Query Frame = 1
Query:  193 ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMDMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKR 531
            E  LFTSESV+EGHPDK+ DQ+SDA+LDA LA+DP++ VA ETC  T    VFGEI+TKA +D  ++VRDT   IG+T A+ G  A+   V  ++ +QS DIAQGV+  L  R
Sbjct:    3 ERKLFTSESVSEGHPDKIADQISDAILDAILAEDPEAHVAAETCVYTGSVHVFGEISTKAYIDINRVVRDTIAEIGYTEAEYGFSAESVGVHPSLVEQSGDIAQGVNEALESR 115          
BLAST of CF835164 vs. ExPASy Swiss-Prot
Match: METK_STAS1 (S-adenosylmethionine synthetase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=metK PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 6.034e-28
Identity = 62/112 (55.36%), Postives = 77/112 (68.75%), Query Frame = 1
Query:  202 LFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMDMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPE 537
            LFTSESV EGHPDK+ DQVSDA+LD  L  DP+++VACET   T M ++ GEI+T   VD  K+VR+T + IG+T A  G D+    VL  I++QSPDIAQGV   L  R E
Sbjct:    7 LFTSESVTEGHPDKIADQVSDAILDEILKDDPNARVACETTVTTGMALISGEISTTTYVDIPKVVRETIKEIGYTRAKFGYDSQTMAVLTAIDEQSPDIAQGVDTALEYRDE 118          
BLAST of CF835164 vs. ExPASy Swiss-Prot
Match: METK_RALPJ (S-adenosylmethionine synthetase OS=Ralstonia pickettii (strain 12J) GN=metK PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 6.034e-28
Identity = 60/104 (57.69%), Postives = 78/104 (75.00%), Query Frame = 1
Query:  199 FLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMDMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGV 510
            FLFTSESV+EGHPDK+ DQ+SDA+LDA LAQD  ++VA ET   T + ++ GEITT ANVDY  + R+T + IG+ + + G+D   C VLV  ++QSPDIAQGV
Sbjct:    5 FLFTSESVSEGHPDKVADQISDAILDAILAQDKYARVAAETLCNTGLVVLAGEITTTANVDYIHVARETIKRIGYDNTEYGIDYKGCAVLVAYDKQSPDIAQGV 108          
BLAST of CF835164 vs. ExPASy Swiss-Prot
Match: METK_PSEMY (S-adenosylmethionine synthetase OS=Pseudomonas mendocina (strain ymp) GN=metK PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 6.034e-28
Identity = 65/118 (55.08%), Postives = 84/118 (71.19%), Query Frame = 1
Query:  193 ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMDMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIG 546
            E  LFTSESV+EGHPDK+ DQ+SDAVLDA + QD  ++VA ET  KT + +V GE+TT A VD E+IVRD   +IG+TS+DVG D + C ++  I +QSPDI QGV      +PE+ G
Sbjct:    3 EYSLFTSESVSEGHPDKIADQISDAVLDAIIVQDKHARVAVETLVKTGVAIVAGEVTTSAWVDLEQIVRDVICNIGYTSSDVGFDGNTCGIINIIGKQSPDINQGVD---RAKPEDQG 117          
BLAST of CF835164 vs. ExPASy Swiss-Prot
Match: METK_MARAV (S-adenosylmethionine synthetase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=metK PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 6.034e-28
Identity = 65/115 (56.52%), Postives = 82/115 (71.30%), Query Frame = 1
Query:  202 LFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMDMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIG 546
            +FTSESV+EGHPDKL DQ+SDAVLDA L  DP ++VACET  KT + +V GEITT A VD E +VR   + I +TS++VG D D C V+  I +QS DIAQGV     ++PE+ G
Sbjct:    6 IFTSESVSEGHPDKLADQISDAVLDAILTDDPHARVACETMVKTGVAIVGGEITTSAWVDLEDLVRGVIKDIDYTSSEVGYDGDTCGVINIIGKQSVDIAQGVD---RQKPEDQG 117          
BLAST of CF835164 vs. ExPASy Swiss-Prot
Match: METK_CHLSY (S-adenosylmethionine synthetase OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=metK PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 6.034e-28
Identity = 61/105 (58.10%), Postives = 78/105 (74.29%), Query Frame = 1
Query:  199 FLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMDMVFGEIT-TKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGV 510
            F FTSESV+EGHPDK+CDQ+SDA+LDA L+ DP ++VA ET T T + +V GE+T  +  +  E+IVR T + IG+TSA+ G DAD C V+V I  QSPDIA GV
Sbjct:   11 FYFTSESVSEGHPDKMCDQISDAILDAFLSHDPKARVAVETATTTGLIVVLGEVTYERGYIPIEEIVRRTVKEIGYTSAEYGFDADTCGVMVAIHGQSPDIAMGV 115          
BLAST of CF835164 vs. ExPASy Swiss-Prot
Match: METK_CHLAA (S-adenosylmethionine synthetase OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=metK PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 6.034e-28
Identity = 61/105 (58.10%), Postives = 78/105 (74.29%), Query Frame = 1
Query:  199 FLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMDMVFGEIT-TKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGV 510
            F FTSESV+EGHPDK+CDQ+SDA+LDA L+ DP ++VA ET T T + +V GE+T  +  +  E+IVR T + IG+TSA+ G DAD C V+V I  QSPDIA GV
Sbjct:   11 FYFTSESVSEGHPDKMCDQISDAILDAFLSHDPKARVAVETATTTGLIVVLGEVTYERGYIPIEEIVRRTVKEIGYTSAEYGFDADTCGVMVAIHGQSPDIAMGV 115          
BLAST of CF835164 vs. ExPASy Swiss-Prot
Match: METK_BUCAT (S-adenosylmethionine synthetase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7) GN=metK PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 6.034e-28
Identity = 61/108 (56.48%), Postives = 78/108 (72.22%), Query Frame = 1
Query:  190 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMDMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVH 513
            M  +LFTSESV+EGHPDK+ DQ+SDA+LD  L QD  ++VACET  KT M ++ GEITT A VD E+I R T   IG+ ++D G DA+ C VL  I +QSPDI QG++
Sbjct:    1 MTEYLFTSESVSEGHPDKIADQISDALLDEILKQDLKARVACETYVKTGMVLIGGEITTTAWVDVEEITRKTINDIGYVNSDAGFDANSCAVLSAIGKQSPDINQGIN 108          
BLAST of CF835164 vs. ExPASy Swiss-Prot
Match: METK_BUCAP (S-adenosylmethionine synthetase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=metK PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 6.034e-28
Identity = 60/107 (56.07%), Postives = 79/107 (73.83%), Query Frame = 1
Query:  190 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMDMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGV 510
            M  +LFTSESV+EGHPDK+ DQ+SDA+LD  + QD  ++VACET  KT M ++ GEITT A VD E+I R+T  +IG+ +++ G DA+ C VL  I +QSPDI QGV
Sbjct:    1 MTEYLFTSESVSEGHPDKIADQISDALLDEIIKQDLKARVACETYVKTGMVLIGGEITTTAWVDVEEITRNTINNIGYINSETGFDANSCAVLSTIGKQSPDITQGV 107          
The following BLAST results are available for this feature:
BLAST of CF835164 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_SYNY36.034e-2852.88S-adenosylmethionine synthetase OS=Synechocystis s... [more]
METK_STRPM6.034e-2854.87S-adenosylmethionine synthetase OS=Streptococcus p... [more]
METK_STAS16.034e-2855.36S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_RALPJ6.034e-2857.69S-adenosylmethionine synthetase OS=Ralstonia picke... [more]
METK_PSEMY6.034e-2855.08S-adenosylmethionine synthetase OS=Pseudomonas men... [more]
METK_MARAV6.034e-2856.52S-adenosylmethionine synthetase OS=Marinobacter aq... [more]
METK_CHLSY6.034e-2858.10S-adenosylmethionine synthetase OS=Chloroflexus au... [more]
METK_CHLAA6.034e-2858.10S-adenosylmethionine synthetase OS=Chloroflexus au... [more]
METK_BUCAT6.034e-2856.48S-adenosylmethionine synthetase OS=Buchnera aphidi... [more]
METK_BUCAP6.034e-2856.07S-adenosylmethionine synthetase OS=Buchnera aphidi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06M13_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06M13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835164 ID=CF835164; Name=CF835164; organism=Citrus sinensis; type=EST; length=548bp
GAAACTACAAATCCTTGCTGCCGTTTTACCTCCTCTCTCTCTTCTCTCAG
CGTATGCATATCGGCTTTCTCTCGTTCTTCTGGGTACTTACCATTTTCGT
ATATCACCACCTTCAATTCCATTTGTACTCGCACCACGGCCTCCTGCAAA
GCGAAAGCTGCAGCTTCAGGTTAAATCAAATTAAAGAAAATGGAAACATT
TCTTTTCACATCAGAATCAGTGAACGAGGGTCACCCGGACAAGCTGTGTG
ACCAAGTTTCGGACGCAGTACTGGACGCGTGTTTGGCTCAGGATCCTGAC
AGCAAAGTTGCTTGTGAAACATGCACAAAGACCAACATGGACATGGTTTT
TGGAGAAATTACAACCAAGGCCAATGTGGATTACGAGAAAATCGTGCGTG
ATACATGCAGATCGATTGGGTTCACATCGGCCGATGTGGGGCTTGATGCT
GATCACTGCAAAGTTCTTGTTAATATTGAGCAGCAAAGCCCTGACATTGC
TCAGGGTGTTCATGGGCATCTCACAAAGCGGCCTGAGGAGATTGGTGC
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