CF835164

Overview
NameCF835164
Unique NameCF835164
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length548
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835164 vs. ExPASy Swiss-Prot
Match: METK_DESVM (S-adenosylmethionine synthetase OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=metK PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.293e-27
Identity = 59/104 (56.73%), Postives = 75/104 (72.12%), Query Frame = 1
Query:  199 FLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMDMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGV 510
            + FTSESV EGHPDK+ DQ+SDAVLD  LAQDP S+VACET   T M  + GEI TK   D  ++VR T R+IG+ S+++G D   C V+ +I++QS DIAQGV
Sbjct:    8 YFFTSESVTEGHPDKVADQISDAVLDVLLAQDPMSRVACETLVTTGMAFIAGEIRTKGFADLPEVVRSTIRNIGYNSSEMGFDWKTCAVISSIDKQSGDIAQGV 111          
BLAST of CF835164 vs. ExPASy Swiss-Prot
Match: METK_CYAP7 (S-adenosylmethionine synthetase OS=Cyanothece sp. (strain PCC 7424) GN=metK PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.293e-27
Identity = 56/104 (53.85%), Postives = 76/104 (73.08%), Query Frame = 1
Query:  199 FLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMDMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGV 510
            +LFTSESV EGHPDK+CDQ+SD +LDA L+QDP S+VA E    T + ++ GEIT+KA V+Y  + R     IG+T ++ G  A+ C VLV +++QSPDI+QGV
Sbjct:    5 YLFTSESVTEGHPDKICDQISDTILDALLSQDPYSRVAAEVVVNTGLVLITGEITSKAQVNYVDLARQKIAEIGYTDSNNGFSANSCAVLVALDEQSPDISQGV 108          
BLAST of CF835164 vs. ExPASy Swiss-Prot
Match: METK_WIGBR (S-adenosylmethionine synthetase OS=Wigglesworthia glossinidia brevipalpis GN=metK PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 2.994e-27
Identity = 54/108 (50.00%), Postives = 81/108 (75.00%), Query Frame = 1
Query:  190 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMDMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVH 513
            M  +LFTSESV+EGHPDK+ DQ+SD +LDA L QD  ++VACET  KT M +V GE+ + A +D E+++R+T + IG+ ++++G DA+ C +L NI +QS DI +G++
Sbjct:    1 MNQYLFTSESVSEGHPDKIADQISDTILDAILTQDKKARVACETYIKTGMVLVGGEVNSYAKIDIEELIRNTIKDIGYINSNMGFDANSCAILNNISKQSKDIEKGLN 108          
BLAST of CF835164 vs. ExPASy Swiss-Prot
Match: METK_STRPZ (S-adenosylmethionine synthetase OS=Streptococcus pyogenes serotype M49 (strain NZ131) GN=metK PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 2.994e-27
Identity = 61/113 (53.98%), Postives = 79/113 (69.91%), Query Frame = 1
Query:  193 ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMDMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKR 531
            E  LFTSESV+EGHPDK+ DQ+SDA+LDA LA+DP++ VA ETC  T    VFGEI+T A +D  ++VRDT   IG+T A+ G  A+   V  ++ +QS DIAQGV+  L  R
Sbjct:    3 ERKLFTSESVSEGHPDKIADQISDAILDAILAEDPEAHVAAETCVYTGSVHVFGEISTTAYIDINRVVRDTIAEIGYTEAEYGFSAESVGVHPSLVEQSGDIAQGVNEALESR 115          
BLAST of CF835164 vs. ExPASy Swiss-Prot
Match: METK_STRPG (S-adenosylmethionine synthetase OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=metK PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 2.994e-27
Identity = 61/113 (53.98%), Postives = 79/113 (69.91%), Query Frame = 1
Query:  193 ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMDMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKR 531
            E  LFTSESV+EGHPDK+ DQ+SDA+LDA LA+DP++ VA ETC  T    VFGEI+T A +D  ++VRDT   IG+T A+ G  A+   V  ++ +QS DIAQGV+  L  R
Sbjct:    3 ERKLFTSESVSEGHPDKIADQISDAILDAILAEDPEAHVAAETCVYTGSVHVFGEISTTAYIDINRVVRDTIAEIGYTEAEYGFSAESVGVHPSLVEQSGDIAQGVNEALESR 115          
BLAST of CF835164 vs. ExPASy Swiss-Prot
Match: METK_STRPF (S-adenosylmethionine synthetase OS=Streptococcus pyogenes serotype M4 (strain MGAS10750) GN=metK PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 2.994e-27
Identity = 61/113 (53.98%), Postives = 79/113 (69.91%), Query Frame = 1
Query:  193 ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMDMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKR 531
            E  LFTSESV+EGHPDK+ DQ+SDA+LDA LA+DP++ VA ETC  T    VFGEI+T A +D  ++VRDT   IG+T A+ G  A+   V  ++ +QS DIAQGV+  L  R
Sbjct:    3 ERKLFTSESVSEGHPDKIADQISDAILDAILAEDPEAHVAAETCVYTGSVHVFGEISTTAYIDINRVVRDTIAEIGYTEAEYGFSAESVGVHPSLVEQSGDIAQGVNEALESR 115          
BLAST of CF835164 vs. ExPASy Swiss-Prot
Match: METK_STRPD (S-adenosylmethionine synthetase OS=Streptococcus pyogenes serotype M2 (strain MGAS10270) GN=metK PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 2.994e-27
Identity = 61/113 (53.98%), Postives = 79/113 (69.91%), Query Frame = 1
Query:  193 ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMDMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKR 531
            E  LFTSESV+EGHPDK+ DQ+SDA+LDA LA+DP++ VA ETC  T    VFGEI+T A +D  ++VRDT   IG+T A+ G  A+   V  ++ +QS DIAQGV+  L  R
Sbjct:    3 ERKLFTSESVSEGHPDKIADQISDAILDAILAEDPEAHVAAETCVYTGSVHVFGEISTTAYIDINRVVRDTIAEIGYTEAEYGFSAESVGVHPSLVEQSGDIAQGVNEALESR 115          
BLAST of CF835164 vs. ExPASy Swiss-Prot
Match: METK_STRPC (S-adenosylmethionine synthetase OS=Streptococcus pyogenes serotype M12 (strain MGAS9429) GN=metK PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 2.994e-27
Identity = 61/113 (53.98%), Postives = 79/113 (69.91%), Query Frame = 1
Query:  193 ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMDMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKR 531
            E  LFTSESV+EGHPDK+ DQ+SDA+LDA LA+DP++ VA ETC  T    VFGEI+T A +D  ++VRDT   IG+T A+ G  A+   V  ++ +QS DIAQGV+  L  R
Sbjct:    3 ERKLFTSESVSEGHPDKIADQISDAILDAILAEDPEAHVAAETCVYTGSVHVFGEISTTAYIDINRVVRDTIAEIGYTEAEYGFSAESVGVHPSLVEQSGDIAQGVNEALESR 115          
BLAST of CF835164 vs. ExPASy Swiss-Prot
Match: METK_STRPB (S-adenosylmethionine synthetase OS=Streptococcus pyogenes serotype M12 (strain MGAS2096) GN=metK PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 2.994e-27
Identity = 61/113 (53.98%), Postives = 79/113 (69.91%), Query Frame = 1
Query:  193 ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMDMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKR 531
            E  LFTSESV+EGHPDK+ DQ+SDA+LDA LA+DP++ VA ETC  T    VFGEI+T A +D  ++VRDT   IG+T A+ G  A+   V  ++ +QS DIAQGV+  L  R
Sbjct:    3 ERKLFTSESVSEGHPDKIADQISDAILDAILAEDPEAHVAAETCVYTGSVHVFGEISTTAYIDINRVVRDTIAEIGYTEAEYGFSAESVGVHPSLVEQSGDIAQGVNEALESR 115          
BLAST of CF835164 vs. ExPASy Swiss-Prot
Match: METK_STRP8 (S-adenosylmethionine synthetase OS=Streptococcus pyogenes serotype M18 GN=metK PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 2.994e-27
Identity = 61/113 (53.98%), Postives = 79/113 (69.91%), Query Frame = 1
Query:  193 ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMDMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKR 531
            E  LFTSESV+EGHPDK+ DQ+SDA+LDA LA+DP++ VA ETC  T    VFGEI+T A +D  ++VRDT   IG+T A+ G  A+   V  ++ +QS DIAQGV+  L  R
Sbjct:    3 ERKLFTSESVSEGHPDKIADQISDAILDAILAEDPEAHVAAETCVYTGSVHVFGEISTTAYIDINRVVRDTIAEIGYTEAEYGFSAESVGVHPSLVEQSGDIAQGVNEALESR 115          
The following BLAST results are available for this feature:
BLAST of CF835164 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_DESVM2.293e-2756.73S-adenosylmethionine synthetase OS=Desulfovibrio v... [more]
METK_CYAP72.293e-2753.85S-adenosylmethionine synthetase OS=Cyanothece sp. ... [more]
METK_WIGBR2.994e-2750.00S-adenosylmethionine synthetase OS=Wigglesworthia ... [more]
METK_STRPZ2.994e-2753.98S-adenosylmethionine synthetase OS=Streptococcus p... [more]
METK_STRPG2.994e-2753.98S-adenosylmethionine synthetase OS=Streptococcus p... [more]
METK_STRPF2.994e-2753.98S-adenosylmethionine synthetase OS=Streptococcus p... [more]
METK_STRPD2.994e-2753.98S-adenosylmethionine synthetase OS=Streptococcus p... [more]
METK_STRPC2.994e-2753.98S-adenosylmethionine synthetase OS=Streptococcus p... [more]
METK_STRPB2.994e-2753.98S-adenosylmethionine synthetase OS=Streptococcus p... [more]
METK_STRP82.994e-2753.98S-adenosylmethionine synthetase OS=Streptococcus p... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06M13_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06M13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835164 ID=CF835164; Name=CF835164; organism=Citrus sinensis; type=EST; length=548bp
GAAACTACAAATCCTTGCTGCCGTTTTACCTCCTCTCTCTCTTCTCTCAG
CGTATGCATATCGGCTTTCTCTCGTTCTTCTGGGTACTTACCATTTTCGT
ATATCACCACCTTCAATTCCATTTGTACTCGCACCACGGCCTCCTGCAAA
GCGAAAGCTGCAGCTTCAGGTTAAATCAAATTAAAGAAAATGGAAACATT
TCTTTTCACATCAGAATCAGTGAACGAGGGTCACCCGGACAAGCTGTGTG
ACCAAGTTTCGGACGCAGTACTGGACGCGTGTTTGGCTCAGGATCCTGAC
AGCAAAGTTGCTTGTGAAACATGCACAAAGACCAACATGGACATGGTTTT
TGGAGAAATTACAACCAAGGCCAATGTGGATTACGAGAAAATCGTGCGTG
ATACATGCAGATCGATTGGGTTCACATCGGCCGATGTGGGGCTTGATGCT
GATCACTGCAAAGTTCTTGTTAATATTGAGCAGCAAAGCCCTGACATTGC
TCAGGGTGTTCATGGGCATCTCACAAAGCGGCCTGAGGAGATTGGTGC
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