CF835187

Overview
NameCF835187
Unique NameCF835187
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length680
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835187 vs. ExPASy Swiss-Prot
Match: INO1_PHAVU (Inositol-3-phosphate synthase OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.426e-38
Identity = 76/83 (91.57%), Postives = 82/83 (98.80%), Query Frame = -3
Query:  283 PIVLDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 531
            PI+LDLVLLAELSTRIQ K+EGEGKFHSFHPVATILSYLTKAPLVPPGTPV+NALSKQRAMLENI+RACVGLAPENNMI+E+K
Sbjct:  429 PIILDLVLLAELSTRIQFKSEGEGKFHSFHPVATILSYLTKAPLVPPGTPVINALSKQRAMLENIMRACVGLAPENNMIMEFK 511          
BLAST of CF835187 vs. ExPASy Swiss-Prot
Match: INO1_ARATH (Inositol-3-phosphate synthase isozyme 1 OS=Arabidopsis thaliana GN=At4g39800 PE=2 SV=3)

HSP 1 Score: 158.303 bits (399), Expect = 3.426e-38
Identity = 76/83 (91.57%), Postives = 82/83 (98.80%), Query Frame = -3
Query:  283 PIVLDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 531
            PI+LDLVLLAELSTRIQ K+EGEGKFHSFHPVATILSYLTKAPLVPPGTPV+NALSKQRAMLENI+RACVGLAPENNMI+E+K
Sbjct:  429 PIILDLVLLAELSTRIQFKSEGEGKFHSFHPVATILSYLTKAPLVPPGTPVINALSKQRAMLENIMRACVGLAPENNMIMEFK 511          
BLAST of CF835187 vs. ExPASy Swiss-Prot
Match: INO1_HORVU (Inositol-3-phosphate synthase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 5.844e-38
Identity = 78/83 (93.98%), Postives = 81/83 (97.59%), Query Frame = -3
Query:  283 PIVLDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 531
            PI+LDLVLLAELSTRIQLKAEGE K HSFHPVATILSYLTKAPLVPPGTPVVNAL+KQRAMLENI+RACVGLAPENNMILEYK
Sbjct:  428 PIILDLVLLAELSTRIQLKAEGEDKLHSFHPVATILSYLTKAPLVPPGTPVVNALAKQRAMLENIMRACVGLAPENNMILEYK 510          
BLAST of CF835187 vs. ExPASy Swiss-Prot
Match: INO1_BRANA (Inositol-3-phosphate synthase OS=Brassica napus PE=2 SV=2)

HSP 1 Score: 155.221 bits (391), Expect = 2.900e-37
Identity = 77/83 (92.77%), Postives = 80/83 (96.39%), Query Frame = -3
Query:  283 PIVLDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 531
            PI+LDLVLLAE+STRIQ K+E EGKFHSFHPVAT LSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK
Sbjct:  428 PIILDLVLLAEISTRIQFKSEKEGKFHSFHPVATKLSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 510          
BLAST of CF835187 vs. ExPASy Swiss-Prot
Match: INO3_ARATH (Probable inositol-3-phosphate synthase isozyme 3 OS=Arabidopsis thaliana GN=At5g10170 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.102e-36
Identity = 74/83 (89.16%), Postives = 80/83 (96.39%), Query Frame = -3
Query:  283 PIVLDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 531
            PI+LDLVLLAEL+TRIQ  +E EGKFHSFHPVAT+LSYL+KAPLVPPGTPVVNALSKQRAMLEN+LRACVGLAPENNMILEYK
Sbjct:  428 PIILDLVLLAELTTRIQFMSENEGKFHSFHPVATLLSYLSKAPLVPPGTPVVNALSKQRAMLENVLRACVGLAPENNMILEYK 510          
BLAST of CF835187 vs. ExPASy Swiss-Prot
Match: INO1_DICDI (Inositol-3-phosphate synthase OS=Dictyostelium discoideum GN=ino1 PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.058e-23
Identity = 49/83 (59.04%), Postives = 68/83 (81.93%), Query Frame = -3
Query:  283 PIVLDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 531
            PI+LDLV+LAE+++RI +K + + +F +FHPV ++LSYL KAP+VP    VVNAL KQRA +ENI +ACVG+AP+NNM+LE +
Sbjct:  428 PIILDLVILAEVTSRITMKKQDDDQFATFHPVLSLLSYLLKAPIVPKHATVVNALFKQRACIENIFKACVGIAPDNNMLLEQR 510          
BLAST of CF835187 vs. ExPASy Swiss-Prot
Match: INO1A_XENLA (Inositol-3-phosphate synthase 1-A OS=Xenopus laevis GN=isyna1-A PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.545e-22
Identity = 50/83 (60.24%), Postives = 66/83 (79.52%), Query Frame = -3
Query:  283 PIVLDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 531
            PI+LDLVLL EL  RI  + E + +F +FH V +ILS+L KAPLVP GTPV+NA  +QR  +ENILRAC+GL+P+N+M+LE+K
Sbjct:  422 PIILDLVLLTELCQRITFRTETDQEFQTFHSVLSILSFLCKAPLVPAGTPVINAFFRQRNCIENILRACLGLSPQNHMMLEHK 504          
BLAST of CF835187 vs. ExPASy Swiss-Prot
Match: INO1_RAT (Inositol-3-phosphate synthase 1 OS=Rattus norvegicus GN=Isyna1 PE=2 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 3.442e-22
Identity = 49/83 (59.04%), Postives = 65/83 (78.31%), Query Frame = -3
Query:  283 PIVLDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 531
            PI+LDLVLL EL  R+    + + +   FHPV ++LS+L KAPLVPPG+PVVNAL +QR+ +ENI RACVGL P+N+M+LE+K
Sbjct:  425 PIMLDLVLLTELCQRVSFCTDSDPEPQGFHPVLSVLSFLFKAPLVPPGSPVVNALFRQRSCIENIFRACVGLPPQNHMLLEHK 507          
BLAST of CF835187 vs. ExPASy Swiss-Prot
Match: INO1B_XENLA (Inositol-3-phosphate synthase 1-B OS=Xenopus laevis GN=isyna1-B PE=2 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 3.442e-22
Identity = 51/83 (61.45%), Postives = 65/83 (78.31%), Query Frame = -3
Query:  283 PIVLDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 531
            PI LDLVLL EL  RI  + E + +F +FH V +ILS+L KAPLVP GTPVVNA  +QR  +ENILRAC+GL+P+N+M+LE+K
Sbjct:  422 PIFLDLVLLTELCQRITFRTETDQEFQTFHSVLSILSFLCKAPLVPAGTPVVNAFFRQRNCIENILRACLGLSPQNHMMLEHK 504          
BLAST of CF835187 vs. ExPASy Swiss-Prot
Match: INO1_MACFA (Inositol-3-phosphate synthase 1 OS=Macaca fascicularis GN=ISYNA1 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.668e-22
Identity = 48/83 (57.83%), Postives = 66/83 (79.52%), Query Frame = -3
Query:  283 PIVLDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 531
            PI+LDL LL EL  R+    + + +  +FHPV ++LS+L KAPLVPPG+PVVNAL +QR+ +ENILRAC+GL P+N+M+LE+K
Sbjct:  425 PIMLDLALLTELCQRVSFCTDADPEPQTFHPVLSLLSFLFKAPLVPPGSPVVNALFRQRSCIENILRACLGLPPQNHMLLEHK 507          
The following BLAST results are available for this feature:
BLAST of CF835187 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
INO1_PHAVU3.426e-3891.57Inositol-3-phosphate synthase OS=Phaseolus vulgari... [more]
INO1_ARATH3.426e-3891.57Inositol-3-phosphate synthase isozyme 1 OS=Arabido... [more]
INO1_HORVU5.844e-3893.98Inositol-3-phosphate synthase OS=Hordeum vulgare P... [more]
INO1_BRANA2.900e-3792.77Inositol-3-phosphate synthase OS=Brassica napus PE... [more]
INO3_ARATH1.102e-3689.16Probable inositol-3-phosphate synthase isozyme 3 O... [more]
INO1_DICDI9.058e-2359.04Inositol-3-phosphate synthase OS=Dictyostelium dis... [more]
INO1A_XENLA1.545e-2260.24Inositol-3-phosphate synthase 1-A OS=Xenopus laevi... [more]
INO1_RAT3.442e-2259.04Inositol-3-phosphate synthase 1 OS=Rattus norvegic... [more]
INO1B_XENLA3.442e-2261.45Inositol-3-phosphate synthase 1-B OS=Xenopus laevi... [more]
INO1_MACFA7.668e-2257.83Inositol-3-phosphate synthase 1 OS=Macaca fascicul... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_06N03_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06N03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835187 ID=CF835187; Name=CF835187; organism=Citrus sinensis; type=EST; length=680bp
TTTTTTTTTTCCCGCAATACAGTTATTTATGAACTTCCATATATTATCTA
CTTGCAATACAAGAGATTTCATGCTCCGAAATGAGCTACAAAGGCAATGG
GCTACACTCCAGCACCTTCATTAAAAAAATAAAAGAGCAAACATACAGGA
CACACTAATATTAACCACAATTTCATGACACAAGACATTACAATCAGTAA
TTAAATGGACCACCACAGCTTTGATTGGTGACAGAGAAAGGGAAAACCGG
TTCTTCCACTTTTCTCCCCTGCAAGTTCTTCACTTGTATTCCAAAATCAT
GTTGTTCTCAGGAGCCAAGCCAACGCAAGCCCTCAGAATGTTCTCAAGCA
TTGCACGCTGCTTCGACAGCGCATTCACCACTGGTGTGCCTGGAGGGACC
AGAGGAGCCTTGGTGAGGTAGCTGAGAATTGTAGCCACAGGGTGGAAAGA
GTGGAATTTGCCCTCTCCTTCAGCTTTGAGCTGGATCCTGGTGCTGAGTT
CAGCCAGCAGAACCAAATCTAGAACGATTGGAGCAGCCAAAAGGAAGGAA
GAGGAAGCTAAGAAAGAAGAGCCAAAGAAAGAAGAAGAAGCTAAGAAAGA
AGAGCCCAAAAAAGAAGAACCCAAGAAAGAAGAAGAAAAGAAAGAGGAAG
AGAAAAAGAAAGAAGCGGCACCGGCACCGG
back to top