CF835196
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835196 vs. ExPASy Swiss-Prot
Match: NSA2_VANPO (Ribosome biogenesis protein NSA2 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=NSA2 PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 2.856e-26 Identity = 63/112 (56.25%), Postives = 79/112 (70.54%), Query Frame = -3 Query: 8 MPQGDYIELHRKRNGYRLDHFERKRKKEAREVHKRSEIAQKALGIKGKMFAKKRYAEKALMKKTLAMHEESSSR--RKVDDEVQEGAVPAYLLDRENTTRAKVLSNTISKKK 337 MPQ +YIE H K++G RLDH ERKRK+EARE HK SE AQK G KGK FAKKRY+EK M+K + HE+S + K DE + A+P YLLDRE T AK +S++I +K+ Sbjct: 1 MPQNEYIEQHIKQHGRRLDHEERKRKREAREAHKISERAQKLTGWKGKQFAKKRYSEKVAMRKKIKAHEQSKVKGGSKPLDESGD-ALPTYLLDREQTNTAKAISSSIKQKR 111
BLAST of CF835196 vs. ExPASy Swiss-Prot
Match: NSA2_SCHPO (Ribosome biogenesis protein nsa2 OS=Schizosaccharomyces pombe GN=nsa2 PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.851e-25 Identity = 56/112 (50.00%), Postives = 77/112 (68.75%), Query Frame = -3 Query: 2 MPQGDYIELHRKRNGYRLDHFERKRKKEAREVHKRSEIAQKALGIKGKMFAKKRYAEKALMKKTLAMHEESSSRRKVDDEVQEGAVPAYLLDRENTTRAKVLSNTISKKKKK 337 MPQ +YIE +++G R DH ERKRKK ARE H S AQK GIK K++ +KR EK MKKT+ HEE ++ ++ D +GAVP YLLDRE ++AK+LS+ + +K+K+ Sbjct: 1 MPQNEYIEESIRKHGRRFDHEERKRKKAAREAHDASLYAQKTRGIKAKLYQEKRRKEKIQMKKTIKQHEERNATQRGSDAQTQGAVPTYLLDREQESQAKMLSSAVKQKRKE 112
BLAST of CF835196 vs. ExPASy Swiss-Prot
Match: NSA2_YARLI (Ribosome biogenesis protein NSA2 OS=Yarrowia lipolytica GN=NSA2 PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 2.047e-24 Identity = 58/112 (51.79%), Postives = 75/112 (66.96%), Query Frame = -3 Query: 8 MPQGDYIELHRKRNGYRLDHFERKRKKEAREVHKRSEIAQKALGIKGKMFAKKRYAEKALMKKTLAMHEES--SSRRKVDDEVQEGAVPAYLLDRENTTRAKVLSNTISKKK 337 MPQ +YIE H K++G RLDH ERKRK+EARE H+ S+ AQ G + KMFAKKRYAEK MKK + HE+S + K + A+P YLLDR+ AK LS++I +K+ Sbjct: 1 MPQNEYIEAHIKKHGRRLDHDERKRKREAREGHRISKDAQNLTGFRAKMFAKKRYAEKVAMKKKIREHEQSKVNGTPKEHNPEDGDALPTYLLDRQQPNSAKALSSSIKQKR 112
BLAST of CF835196 vs. ExPASy Swiss-Prot
Match: NSA2_USTMA (Ribosome biogenesis protein NSA2 OS=Ustilago maydis GN=NSA2 PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 7.777e-24 Identity = 56/109 (51.38%), Postives = 70/109 (64.22%), Query Frame = -3 Query: 5 QGDYIELHRKRNGYRLDHFERKRKKEAREVHKRSEIAQKALGIKGKMFAKKRYAEKALMKKTLAMHEESSSRRKVDDEVQEGAVPAYLLDRENTTRAKVLSNTISKKKK 331 Q DYIE H +R+G RLDH ER+RK+ AREVHK S +AQK G+K KM KKR EK MKKTL HEE ++ A+P YLLDRE AK LS+ + +++K Sbjct: 14 QNDYIEEHIRRHGRRLDHEERQRKRAAREVHKASAVAQKVTGLKAKMLNKKRRNEKIQMKKTLKAHEERDVKQASTSSDPNQALPTYLLDREGQKDAKALSSAVKERRK 122
BLAST of CF835196 vs. ExPASy Swiss-Prot
Match: NSA2_CANAL (Ribosome biogenesis protein NSA2 OS=Candida albicans GN=NSA2 PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.327e-23 Identity = 55/111 (49.55%), Postives = 76/111 (68.47%), Query Frame = -3 Query: 8 MPQGDYIELHRKRNGYRLDHFERKRKKEAREVHKRSEIAQKALGIKGKMFAKKRYAEKALMKKTLAMHEESSSRRKVDDEVQEG-AVPAYLLDRENTTRAKVLSNTISKKK 337 MPQ +YIE H K++G RLD+ ERKRKKEARE H+ ++ AQ G + K FAKKRYAEK MKK + H+ES + + ++G A+P YLLDR+ AK +S++I +K+ Sbjct: 1 MPQNEYIEQHIKKHGRRLDYEERKRKKEAREGHRVAKDAQTLKGWRAKQFAKKRYAEKVAMKKKIKAHQESKVKGPSTPKAEDGEALPTYLLDRQTNNTAKAISSSIKQKR 111
BLAST of CF835196 vs. ExPASy Swiss-Prot
Match: NSA2_LODEL (Ribosome biogenesis protein NSA2 OS=Lodderomyces elongisporus GN=NSA2 PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.733e-23 Identity = 56/111 (50.45%), Postives = 75/111 (67.57%), Query Frame = -3 Query: 8 MPQGDYIELHRKRNGYRLDHFERKRKKEAREVHKRSEIAQKALGIKGKMFAKKRYAEKALMKKTLAMHEESSSRRKVDDEVQEG-AVPAYLLDRENTTRAKVLSNTISKKK 337 MPQ +YIE H K++G RLDH ERKRKKEARE H+ ++ AQ G + K FAKKRY+EK M+K + H+ES + + EG A+P YLLDR+ AK LS++I +K+ Sbjct: 1 MPQNEYIEQHIKQHGRRLDHEERKRKKEAREGHRVAKDAQTLKGWRAKQFAKKRYSEKVSMRKKIKAHQESKVKGPSTPKQDEGEALPTYLLDRQTNNTAKALSSSIKQKR 111
BLAST of CF835196 vs. ExPASy Swiss-Prot
Match: NSA2_CRYNE (Ribosome biogenesis protein NSA2 OS=Cryptococcus neoformans GN=NSA2 PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.733e-23 Identity = 54/105 (51.43%), Postives = 73/105 (69.52%), Query Frame = -3 Query: 5 IELHRKRNGYRLDHFERKRKKEAREVHKRSEIAQKALGIKGKMFAKKRYAEKALMKKTLAMHEESSSRRKVDDEVQEGAVPAYLLDRENTTRAKVLSNTISKKKK 319 +E HRKR+G RLD+ E+KRK+ ARE HK S AQK G K K+ +R+AEK MKKTL H+E + ++K D V+EGA+PAYLLDR+ AK LS+ + ++K Sbjct: 1 MEEHRKRHGRRLDYEEKKRKRTAREAHKASADAQKIFGHKAKLHHARRHAEKVQMKKTLKAHDERNVKQKDDGAVKEGALPAYLLDRDGQKDAKALSSAVKDRRK 105
BLAST of CF835196 vs. ExPASy Swiss-Prot
Match: NSA2_PICST (Ribosome biogenesis protein NSA2 OS=Pichia stipitis GN=NSA2 PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 2.263e-23 Identity = 55/111 (49.55%), Postives = 74/111 (66.67%), Query Frame = -3 Query: 8 MPQGDYIELHRKRNGYRLDHFERKRKKEAREVHKRSEIAQKALGIKGKMFAKKRYAEKALMKKTLAMHEESSSRRKVDDEVQEG-AVPAYLLDRENTTRAKVLSNTISKKK 337 MPQ +YIE H K++G RLDH ERKRKKEARE H+ ++ AQ G + K FAKKRY+EK MKK + H+ES + +G A+P YLLDR+ AK +S++I +K+ Sbjct: 1 MPQNEYIEQHIKQHGRRLDHEERKRKKEAREGHRIAKDAQTLKGWRAKQFAKKRYSEKVAMKKKIKAHQESKVNGPATPKEDDGEALPTYLLDRQTNNTAKAISSSIKQKR 111
BLAST of CF835196 vs. ExPASy Swiss-Prot
Match: NSA2_PICGU (Ribosome biogenesis protein NSA2 OS=Pichia guilliermondii GN=NSA2 PE=3 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 3.860e-23 Identity = 54/111 (48.65%), Postives = 77/111 (69.37%), Query Frame = -3 Query: 8 MPQGDYIELHRKRNGYRLDHFERKRKKEAREVHKRSEIAQKALGIKGKMFAKKRYAEKALMKKTLAMHEESSSRRKVDDEVQEG-AVPAYLLDRENTTRAKVLSNTISKKK 337 MPQ +YIE H K++G RLDH ERKRK+ ARE H+ ++ AQ G +GK FAK+RY+EK MKK + H+ES + + +G A+P YLLDR++T AK +S++I +K+ Sbjct: 1 MPQNEYIEKHIKQHGRRLDHEERKRKRAAREGHRVAKDAQTLKGWRGKQFAKQRYSEKVAMKKKIKAHQESKVKGPSTPKENDGEALPTYLLDRKDTNTAKAISSSIKQKR 111
BLAST of CF835196 vs. ExPASy Swiss-Prot
Match: NSA2_DEBHA (Ribosome biogenesis protein NSA2 OS=Debaryomyces hansenii GN=NSA2 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.860e-23 Identity = 54/111 (48.65%), Postives = 76/111 (68.47%), Query Frame = -3 Query: 8 MPQGDYIELHRKRNGYRLDHFERKRKKEAREVHKRSEIAQKALGIKGKMFAKKRYAEKALMKKTLAMHEESSSRRKVDDEVQEG-AVPAYLLDRENTTRAKVLSNTISKKK 337 MPQ +YIE H K++G RLD+ ERKRKK ARE H+ ++ AQ+ G +GK FAKKRY+EK MKK + H+ES + + +G A+P YLLDR+ AK +S++I +K+ Sbjct: 1 MPQNEYIEQHIKQHGRRLDYEERKRKKAAREGHRIAKDAQELKGWRGKQFAKKRYSEKVAMKKKIKTHQESKVKGPATPKEDDGEALPTYLLDRQTNNSAKAISSSIKQKR 111 The following BLAST results are available for this feature:
BLAST of CF835196 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835196 ID=CF835196; Name=CF835196; organism=Citrus sinensis; type=EST; length=357bpback to top |