CF835207

Overview
NameCF835207
Unique NameCF835207
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length593
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835207 vs. ExPASy Swiss-Prot
Match: SAHH_MYCSJ (Adenosylhomocysteinase OS=Mycobacterium sp. (strain JLS) GN=ahcY PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 6.461e-45
Identity = 94/162 (58.02%), Postives = 115/162 (70.99%), Query Frame = 2
Query:  113 LSVEKSASGREFKGEDLSXADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNVGGTQDHAAAAI---------GRDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEE 571
            L+VE S +G ++K  DLS A+FGR EI LAE EMPGLMA R E+    P KGA+I+GSLHMT+QTAVLIETL +LGAEVRW SCN+  TQDHAAAA+               VFAWKGETL+EYWW  E+ L W PG   ++I+DDGGDAT+L+  G + E+
Sbjct:    8 LTVE-SRNGIDYKVADLSLAEFGRKEIRLAEHEMPGLMALRREYAEVAPLKGARISGSLHMTVQTAVLIETLVSLGAEVRWASCNIFSTQDHAAAAVVVGPHGTPEEPKGTPVFAWKGETLEEYWWAAEQMLTW-PGEPANMILDDGGDATMLVLRGAQFEK 167          
BLAST of CF835207 vs. ExPASy Swiss-Prot
Match: SAHH_BORPD (Adenosylhomocysteinase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=ahcY PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 6.461e-45
Identity = 88/138 (63.77%), Postives = 103/138 (74.64%), Query Frame = 2
Query:  158 DLSXADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNVGGTQDHAAAAIGRDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEE 571
            D+S A +GR E+ +AE EMPGLMA R EF  SQP KGA+I GSLHMTIQT VLIETL ALGAEVRW SCN+  TQDHAAAAI      VFA KGETL+EYW  T +  +W  G   ++I+DDGGDATLL+H G +AE+
Sbjct:   16 DMSLAAWGRRELAIAETEMPGLMAIREEFAASQPLKGARIAGSLHMTIQTGVLIETLVALGAEVRWASCNIFSTQDHAAAAIAATGTPVFAVKGETLEEYWQYTHRIFEWPEGRHANMILDDGGDATLLLHLGARAEQ 153          
BLAST of CF835207 vs. ExPASy Swiss-Prot
Match: SAHH_LEPIN (Adenosylhomocysteinase OS=Leptospira interrogans GN=ahcY PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 8.439e-45
Identity = 90/147 (61.22%), Postives = 107/147 (72.79%), Query Frame = 2
Query:  113 LSVEKSASGREFKGEDLSXADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNVGGTQDHAAAAIGRDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHE 553
            +SV        +K +DLS A++GR EI LAE EMPGLMA R E+   +P  GA+I GSLHMTIQTAVLIETLT LGAEVRW SCN+  TQDHAAAAI +    VFAWKGET +EYWWC E+ + +G   GP++I+DDGGD T  IHE
Sbjct:    1 MSVTTQEKDLSYKVKDLSQAEWGRQEIILAEKEMPGLMALRQEYKGKKPLAGARIAGSLHMTIQTAVLIETLTELGAEVRWSSCNIFSTQDHAAAAIAKAGIPVFAWKGETEEEYWWCIEQTIFFG-DKGPNMILDDGGDLTAYIHE 146          
BLAST of CF835207 vs. ExPASy Swiss-Prot
Match: SAHH_LEPIC (Adenosylhomocysteinase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=ahcY PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 8.439e-45
Identity = 90/147 (61.22%), Postives = 107/147 (72.79%), Query Frame = 2
Query:  113 LSVEKSASGREFKGEDLSXADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNVGGTQDHAAAAIGRDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHE 553
            +SV        +K +DLS A++GR EI LAE EMPGLMA R E+   +P  GA+I GSLHMTIQTAVLIETLT LGAEVRW SCN+  TQDHAAAAI +    VFAWKGET +EYWWC E+ + +G   GP++I+DDGGD T  IHE
Sbjct:    1 MSVTTQEKDLSYKVKDLSQAEWGRQEIILAEKEMPGLMALRQEYKGKKPLAGARIAGSLHMTIQTAVLIETLTELGAEVRWSSCNIFSTQDHAAAAIAKAGIPVFAWKGETEEEYWWCIEQTIFFG-DKGPNMILDDGGDLTAYIHE 146          
BLAST of CF835207 vs. ExPASy Swiss-Prot
Match: SAHH_VARPS (Adenosylhomocysteinase OS=Variovorax paradoxus (strain S110) GN=ahcY PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.102e-44
Identity = 92/142 (64.79%), Postives = 108/142 (76.06%), Query Frame = 2
Query:  158 DLSXADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNVGGTQDHAAAAIGRDSASVFAWKGETLQEYWWCTEKALDWGP----GGGPDLIVDDGGDATLLIHEGVKAEE 571
            DLS A +GR EI++AE EMPGLMA R EF  +QP KGA+ITGSLHMTIQTAVLIETL ALGA VRW SCN+  TQDHAAAAI      VFA KGE+L++YW  T    D+GP    G GP++I+DDGGDATLL+H G +AE+
Sbjct:   19 DLSLAAWGRKEIKIAETEMPGLMAIREEFSKAQPLKGARITGSLHMTIQTAVLIETLQALGATVRWASCNIFSTQDHAAAAIAAAGTPVFAIKGESLKDYWDYTHAIFDFGPKGSQGEGPNMILDDGGDATLLMHLGQRAEK 160          
BLAST of CF835207 vs. ExPASy Swiss-Prot
Match: SAHH_RHILO (Adenosylhomocysteinase OS=Rhizobium loti GN=ahcY PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.439e-44
Identity = 85/143 (59.44%), Postives = 108/143 (75.52%), Query Frame = 2
Query:  140 REFKGEDLSXADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNVGGTQDHAAAAIGRDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAE 568
            +++   D+S A +GR E+++AE EMPGLMACR EFG  +P KGA+ITGSLHMTIQTAVLIETL ALGA++RW SCN+  TQDHAAAAI      VFA KGE+L++YW  T++   W  GG  ++I+DDGGDAT+ I  G +AE
Sbjct:    5 KDYVVADISLAGWGRKELDIAETEMPGLMACREEFGAKKPLKGARITGSLHMTIQTAVLIETLKALGADIRWASCNIFSTQDHAAAAIAEAGIPVFAVKGESLEQYWDYTDRIFQWADGGLSNMILDDGGDATMYILIGARAE 147          
BLAST of CF835207 vs. ExPASy Swiss-Prot
Match: SAHH_BORPE (Adenosylhomocysteinase OS=Bordetella pertussis GN=ahcY PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.439e-44
Identity = 87/138 (63.04%), Postives = 103/138 (74.64%), Query Frame = 2
Query:  158 DLSXADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNVGGTQDHAAAAIGRDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEE 571
            D++ A +GR E+ +AE EMPGLMA R E+  SQP KGA+I GSLHMTIQT VLIETL ALGAEVRW SCN+  TQDHAAAAI      VFA KGETL+EYW  T K  +W  G   ++I+DDGGDATLL+H G +AE+
Sbjct:   16 DMALAGWGRRELAIAETEMPGLMAIRDEYAASQPLKGARIAGSLHMTIQTGVLIETLVALGAEVRWASCNIFSTQDHAAAAIAATGTPVFAIKGETLEEYWQYTHKIFEWPEGRHANMILDDGGDATLLLHLGARAEQ 153          
BLAST of CF835207 vs. ExPASy Swiss-Prot
Match: SAHH_BORPA (Adenosylhomocysteinase OS=Bordetella parapertussis GN=ahcY PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.439e-44
Identity = 87/138 (63.04%), Postives = 103/138 (74.64%), Query Frame = 2
Query:  158 DLSXADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNVGGTQDHAAAAIGRDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEE 571
            D++ A +GR E+ +AE EMPGLMA R E+  SQP KGA+I GSLHMTIQT VLIETL ALGAEVRW SCN+  TQDHAAAAI      VFA KGETL+EYW  T K  +W  G   ++I+DDGGDATLL+H G +AE+
Sbjct:   16 DMALAGWGRRELAIAETEMPGLMAIRDEYAASQPLKGARIAGSLHMTIQTGVLIETLVALGAEVRWASCNIFSTQDHAAAAIAATGTPVFAIKGETLEEYWQYTHKIFEWPEGRHANMILDDGGDATLLLHLGARAEQ 153          
BLAST of CF835207 vs. ExPASy Swiss-Prot
Match: SAHH_BORBR (Adenosylhomocysteinase OS=Bordetella bronchiseptica GN=ahcY PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.439e-44
Identity = 87/138 (63.04%), Postives = 103/138 (74.64%), Query Frame = 2
Query:  158 DLSXADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNVGGTQDHAAAAIGRDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEE 571
            D++ A +GR E+ +AE EMPGLMA R E+  SQP KGA+I GSLHMTIQT VLIETL ALGAEVRW SCN+  TQDHAAAAI      VFA KGETL+EYW  T K  +W  G   ++I+DDGGDATLL+H G +AE+
Sbjct:   16 DMALAGWGRRELAIAETEMPGLMAIRDEYAASQPLKGARIAGSLHMTIQTGVLIETLVALGAEVRWASCNIFSTQDHAAAAIAATGTPVFAIKGETLEEYWQYTHKIFEWPEGRHANMILDDGGDATLLLHLGARAEQ 153          
BLAST of CF835207 vs. ExPASy Swiss-Prot
Match: SAHH_LEPCP (Adenosylhomocysteinase OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=ahcY PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 1.880e-44
Identity = 89/153 (58.17%), Postives = 111/153 (72.55%), Query Frame = 2
Query:  125 KSASGREFKGEDLSXADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNVGGTQDHAAAAIGRDSASVFAWKGETLQEYWWCTEKALDWGPGG----GPDLIVDDGGDATLLIHEGVKAEE 571
            K+    ++   DLS A +GR EI +AE EMPGLMA R EF   QP KGA++TGSLHMTIQTAVL+ETL ALGA+VRW SCN+  TQDHAAAA+      VFA+KGETL +YW  T +  ++G  G    GP++I+DDGGDATLL+H G +AE+
Sbjct:    6 KALHENDYLVADLSLAAWGRKEIRIAETEMPGLMAIREEFAAKQPLKGARVTGSLHMTIQTAVLVETLQALGAQVRWASCNIFSTQDHAAAALAVQGTPVFAYKGETLADYWDYTHRIFEFGAAGTDGEGPNMILDDGGDATLLMHLGKRAEK 158          
The following BLAST results are available for this feature:
BLAST of CF835207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 242
Match NameE-valueIdentityDescription
SAHH_MYCSJ6.461e-4558.02Adenosylhomocysteinase OS=Mycobacterium sp. (strai... [more]
SAHH_BORPD6.461e-4563.77Adenosylhomocysteinase OS=Bordetella petrii (strai... [more]
SAHH_LEPIN8.439e-4561.22Adenosylhomocysteinase OS=Leptospira interrogans G... [more]
SAHH_LEPIC8.439e-4561.22Adenosylhomocysteinase OS=Leptospira interrogans s... [more]
SAHH_VARPS1.102e-4464.79Adenosylhomocysteinase OS=Variovorax paradoxus (st... [more]
SAHH_RHILO1.439e-4459.44Adenosylhomocysteinase OS=Rhizobium loti GN=ahcY P... [more]
SAHH_BORPE1.439e-4463.04Adenosylhomocysteinase OS=Bordetella pertussis GN=... [more]
SAHH_BORPA1.439e-4463.04Adenosylhomocysteinase OS=Bordetella parapertussis... [more]
SAHH_BORBR1.439e-4463.04Adenosylhomocysteinase OS=Bordetella bronchiseptic... [more]
SAHH_LEPCP1.880e-4458.17Adenosylhomocysteinase OS=Leptothrix cholodnii (st... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06N13_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06N13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835207 ID=CF835207; Name=CF835207; organism=Citrus sinensis; type=EST; length=593bp
CGTTTAGGTTGTACATCATTCACTTTGTTTGGTTAGTTCCCCTAGAGAGA
GNAGATTGCCCTCTCTTCCTTCTTTCTTTTAGATCTATCAATACTATTAA
TCAACCATGGCTTTGTCCGTCGAGAAATCCGCTAGCGGTCGTGAATTCAA
GGGGGAGGATCTGTCCCANGCTGACTTCGGCCGCCTCGAAATCGAGTTGG
CCGAAGTCGAAATGCCGGGGCTCATGGCTTGCCGCGCCGAGTTCGGCCCT
TCACAGCCTTTCAAAGGAGCCAAGATCACCGGTTCACTCCACATGACCAT
CCAGACGGCCGTCCTCATCGAGACACTCACCGCTCTCGGCGCCGAAGTCC
GCTGGTGCTCCTGCAACGTGGGGGGAACCCAAGACCACGCGGCCGCCGCC
ATCGGGCGTGACTCCGCCTCCGTCTTTGCCTGGAAGGGTGAGACCCTCCA
GGAGTACTGGTGGTGCACGGAGAAAGCCCTGGACTGGGGTCCCGGCGGCG
GCCCAGATCTCATCGTCGATGACGGTGGTGACGCCACGTTGTTGATCCAC
GAGGGAGTCAAAGCTGAGGAGATCTACGAGAAGACCGGGAAGT
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