CF835207

Overview
NameCF835207
Unique NameCF835207
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length593
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835207 vs. ExPASy Swiss-Prot
Match: SAHH_RAT (Adenosylhomocysteinase OS=Rattus norvegicus GN=Ahcy PE=1 SV=3)

HSP 1 Score: 157.147 bits (396), Expect = 5.858e-38
Identity = 78/135 (57.78%), Postives = 97/135 (71.85%), Query Frame = 2
Query:  146 FKGEDLSXADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNVGGTQDHAAAAIGRDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIH 550
            +K  D+  A +GR  +++AE EMPGLM  R  +  S+P KGA+I G LHMT++TAVLIETL ALGAEVRW SCN+  TQDHAAAAI +    VFAWKGET +EY WC E+ L +   G  ++I+DDGGD T LIH
Sbjct:    7 YKVADIGLAAWGRKALDIAENEMPGLMRMREMYSASKPLKGARIAGCLHMTVETAVLIETLVALGAEVRWSSCNIFSTQDHAAAAIAKAGIPVFAWKGETDEEYLWCIEQTLHF-KDGPLNMILDDGGDLTNLIH 140          
BLAST of CF835207 vs. ExPASy Swiss-Prot
Match: SAHH_MOUSE (Adenosylhomocysteinase OS=Mus musculus GN=Ahcy PE=1 SV=3)

HSP 1 Score: 157.147 bits (396), Expect = 5.858e-38
Identity = 78/135 (57.78%), Postives = 97/135 (71.85%), Query Frame = 2
Query:  146 FKGEDLSXADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNVGGTQDHAAAAIGRDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIH 550
            +K  D+  A +GR  +++AE EMPGLM  R  +  S+P KGA+I G LHMT++TAVLIETL ALGAEVRW SCN+  TQDHAAAAI +    VFAWKGET +EY WC E+ L +   G  ++I+DDGGD T LIH
Sbjct:    7 YKVADIGLAAWGRKALDIAENEMPGLMRMREMYSASKPLKGARIAGCLHMTVETAVLIETLVALGAEVRWSSCNIFSTQDHAAAAIAKAGIPVFAWKGETDEEYLWCIEQTLHF-KDGPLNMILDDGGDLTNLIH 140          
BLAST of CF835207 vs. ExPASy Swiss-Prot
Match: SAHH_FLAJ1 (Adenosylhomocysteinase OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=ahcY PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 9.991e-38
Identity = 81/135 (60.00%), Postives = 97/135 (71.85%), Query Frame = 2
Query:  146 FKGEDLSXADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNVGGTQDHAAAAIGRDSASVFAWKGETLQEYWWCTEKALDWGPGGGP-DLIVDDGGDATLLI 547
            FK +D+S A +GR EIELAE EMPGLMA RAE+   QP KGA+I G LHMTIQTAVLIETL ALGAEV W SCN+  TQD AAAAI     SV+AWKG   + + WC E+ L +G    P ++I+DDGGD T ++
Sbjct:   11 FKVKDISLAAWGRKEIELAEAEMPGLMALRAEYKDEQPLKGARIAGCLHMTIQTAVLIETLIALGAEVTWSSCNIFSTQDQAAAAIAAAGISVYAWKGLDEESFDWCIEQTLFFGEERKPLNMILDDGGDLTNMV 145          
BLAST of CF835207 vs. ExPASy Swiss-Prot
Match: SAHH_PSEU5 (Adenosylhomocysteinase OS=Pseudomonas stutzeri (strain A1501) GN=ahcY PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.305e-37
Identity = 81/147 (55.10%), Postives = 99/147 (67.35%), Query Frame = 2
Query:  116 SVEKSASGREFKGEDLSXADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNVGGTQDHAAAAIGRDSASVFAWKGETLQEYWWCTEKA-LDWGPGGGPDLIVDDGGDATLLIHE 553
            +V   A   +FK  D+S A +GR EI +AE EMP LM  R ++   QP KGAKI G +HMTIQTAVLIETL ALGAEVRW SCN+  TQD AAAAI      VFAWKGET +EY WC E+  L  G     ++++DDGGD T ++H+
Sbjct:    3 AVMTPAGFTDFKVADISLAAWGRREIIIAESEMPALMGLRRKYAAEQPLKGAKILGCIHMTIQTAVLIETLIALGAEVRWSSCNIFSTQDQAAAAIAAAGIPVFAWKGETEEEYEWCIEQTILKDGQPWDANMVLDDGGDLTQILHD 149          
BLAST of CF835207 vs. ExPASy Swiss-Prot
Match: SAHH_MACFA (Adenosylhomocysteinase OS=Macaca fascicularis GN=AHCY PE=2 SV=3)

HSP 1 Score: 155.606 bits (392), Expect = 1.704e-37
Identity = 76/135 (56.30%), Postives = 98/135 (72.59%), Query Frame = 2
Query:  146 FKGEDLSXADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNVGGTQDHAAAAIGRDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIH 550
            +K  D+  A +GR  +++AE EMPGLM  R ++  S+P KGA+I G LHMT++TAVLIETL ALGAEV+W SCN+  TQDHAAAAI +    V+AWKGET +EY WC E+ L +   G  ++I+DDGGD T LIH
Sbjct:    7 YKVADIGLAAWGRKALDIAENEMPGLMRMREQYSASKPLKGARIAGCLHMTVETAVLIETLVALGAEVQWSSCNIFSTQDHAAAAIAKAGIPVYAWKGETDEEYLWCIEQTL-YFKDGPLNMILDDGGDLTNLIH 140          
BLAST of CF835207 vs. ExPASy Swiss-Prot
Match: SAHH_PSEFS (Adenosylhomocysteinase OS=Pseudomonas fluorescens (strain SBW25) GN=ahcY PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 2.907e-37
Identity = 81/147 (55.10%), Postives = 98/147 (66.67%), Query Frame = 2
Query:  116 SVEKSASGREFKGEDLSXADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNVGGTQDHAAAAIGRDSASVFAWKGETLQEYWWCTEKA-LDWGPGGGPDLIVDDGGDATLLIHE 553
            +V   A   ++K  D+S A +GR E  +AE EMP LM  R ++   QP KGAKI G +HMTIQTAVLIETL ALGAEVRW SCN+  TQD AAAAI      VFAWKGET +EY WC E+  L  G     ++I+DDGGD T L+H+
Sbjct:    3 AVNTPADFNDYKVADMSLAAWGRRETFIAESEMPALMGLRRKYAAEQPLKGAKILGCIHMTIQTAVLIETLVALGAEVRWSSCNIFSTQDQAAAAIAAAGIPVFAWKGETEEEYEWCLEQTILKDGAPWDANMILDDGGDLTELLHK 149          
BLAST of CF835207 vs. ExPASy Swiss-Prot
Match: SAHH_PSE14 (Adenosylhomocysteinase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=ahcY PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 2.907e-37
Identity = 80/142 (56.34%), Postives = 97/142 (68.31%), Query Frame = 2
Query:  131 ASGREFKGEDLSXADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNVGGTQDHAAAAIGRDSASVFAWKGETLQEYWWCTEKA-LDWGPGGGPDLIVDDGGDATLLIHE 553
            A   ++K  D+S A +GR E  +AE EMP LM  R ++   QP KGAKI G +HMTIQTAVLIETL ALGAEVRW SCN+  TQD AAAAI      VFAWKGET +EY WC E+  L  G     ++I+DDGGD T++IH+
Sbjct:    8 AEFNDYKVADISLAAWGRRETIIAESEMPALMGLRRKYAGDQPLKGAKILGCIHMTIQTAVLIETLVALGAEVRWSSCNIFSTQDQAAAAIAAAGIPVFAWKGETEEEYEWCIEQTILKDGQPWDANMILDDGGDLTVIIHK 149          
BLAST of CF835207 vs. ExPASy Swiss-Prot
Match: SAHH_PSEU2 (Adenosylhomocysteinase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=ahcY PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 6.476e-37
Identity = 81/147 (55.10%), Postives = 98/147 (66.67%), Query Frame = 2
Query:  116 SVEKSASGREFKGEDLSXADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNVGGTQDHAAAAIGRDSASVFAWKGETLQEYWWCTEKA-LDWGPGGGPDLIVDDGGDATLLIHE 553
            +V   A   ++K  D+S A +GR E  +AE EMP LM  R ++   QP KGAKI G +HMTIQTAVLIETL ALGAEVRW SCN+  TQD AAAAI      VFAWKGET +EY WC E+  L  G     ++I+DDGGD T +IH+
Sbjct:    3 AVMTPAEFNDYKVADISLAAWGRRETIIAESEMPALMGLRRKYAGDQPLKGAKILGCIHMTIQTAVLIETLVALGAEVRWSSCNIFSTQDQAAAAIAAAGIPVFAWKGETEEEYEWCIEQTILKDGQPWDANMILDDGGDLTEIIHK 149          
BLAST of CF835207 vs. ExPASy Swiss-Prot
Match: SAHH_HAHCH (Adenosylhomocysteinase OS=Hahella chejuensis (strain KCTC 2396) GN=ahcY PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 6.476e-37
Identity = 75/137 (54.74%), Postives = 97/137 (70.80%), Query Frame = 2
Query:  143 EFKGEDLSXADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNVGGTQDHAAAAIGRDSASVFAWKGETLQEYWWCTEKALDW-GPGGGPDLIVDDGGDATLLIH 550
            ++K +D+S A +GR EI++AE EMP LM  R ++   QP  GA+I G +HMTIQTAVLIETL ALGAEVRW SCN+  TQDHAAAAI      VFAWKGET +EY WC ++ +   G     ++++DDGGD T ++H
Sbjct:   12 DYKVKDISLAAWGRKEIDIAEGEMPALMTLREKYRAQQPLAGARILGCIHMTIQTAVLIETLVALGAEVRWSSCNIFSTQDHAAAAIAAAGVPVFAWKGETEEEYVWCIKQTITKDGQPWNANMVLDDGGDLTEILH 148          
BLAST of CF835207 vs. ExPASy Swiss-Prot
Match: SAHH_PSESM (Adenosylhomocysteinase OS=Pseudomonas syringae pv. tomato GN=ahcY PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 8.458e-37
Identity = 79/142 (55.63%), Postives = 97/142 (68.31%), Query Frame = 2
Query:  131 ASGREFKGEDLSXADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNVGGTQDHAAAAIGRDSASVFAWKGETLQEYWWCTEKA-LDWGPGGGPDLIVDDGGDATLLIHE 553
            A   ++K  D+S A +GR E  +AE EMP LM  R ++   QP KGAKI G +HMTIQTAVLIETL ALGAEVRW SCN+  TQD AAAAI     +V+AWKGET +EY WC E+  L  G     ++I+DDGGD T +IH+
Sbjct:    8 AEFNDYKVADISLAAWGRRETIIAESEMPALMGLRRKYAAEQPLKGAKILGCIHMTIQTAVLIETLVALGAEVRWSSCNIFSTQDQAAAAIAAAGIAVYAWKGETEEEYEWCIEQTILKDGQPWDANMILDDGGDLTEIIHK 149          
The following BLAST results are available for this feature:
BLAST of CF835207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 242
Match NameE-valueIdentityDescription
SAHH_RAT5.858e-3857.78Adenosylhomocysteinase OS=Rattus norvegicus GN=Ahc... [more]
SAHH_MOUSE5.858e-3857.78Adenosylhomocysteinase OS=Mus musculus GN=Ahcy PE=... [more]
SAHH_FLAJ19.991e-3860.00Adenosylhomocysteinase OS=Flavobacterium johnsonia... [more]
SAHH_PSEU51.305e-3755.10Adenosylhomocysteinase OS=Pseudomonas stutzeri (st... [more]
SAHH_MACFA1.704e-3756.30Adenosylhomocysteinase OS=Macaca fascicularis GN=A... [more]
SAHH_PSEFS2.907e-3755.10Adenosylhomocysteinase OS=Pseudomonas fluorescens ... [more]
SAHH_PSE142.907e-3756.34Adenosylhomocysteinase OS=Pseudomonas syringae pv.... [more]
SAHH_PSEU26.476e-3755.10Adenosylhomocysteinase OS=Pseudomonas syringae pv.... [more]
SAHH_HAHCH6.476e-3754.74Adenosylhomocysteinase OS=Hahella chejuensis (stra... [more]
SAHH_PSESM8.458e-3755.63Adenosylhomocysteinase OS=Pseudomonas syringae pv.... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06N13_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06N13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835207 ID=CF835207; Name=CF835207; organism=Citrus sinensis; type=EST; length=593bp
CGTTTAGGTTGTACATCATTCACTTTGTTTGGTTAGTTCCCCTAGAGAGA
GNAGATTGCCCTCTCTTCCTTCTTTCTTTTAGATCTATCAATACTATTAA
TCAACCATGGCTTTGTCCGTCGAGAAATCCGCTAGCGGTCGTGAATTCAA
GGGGGAGGATCTGTCCCANGCTGACTTCGGCCGCCTCGAAATCGAGTTGG
CCGAAGTCGAAATGCCGGGGCTCATGGCTTGCCGCGCCGAGTTCGGCCCT
TCACAGCCTTTCAAAGGAGCCAAGATCACCGGTTCACTCCACATGACCAT
CCAGACGGCCGTCCTCATCGAGACACTCACCGCTCTCGGCGCCGAAGTCC
GCTGGTGCTCCTGCAACGTGGGGGGAACCCAAGACCACGCGGCCGCCGCC
ATCGGGCGTGACTCCGCCTCCGTCTTTGCCTGGAAGGGTGAGACCCTCCA
GGAGTACTGGTGGTGCACGGAGAAAGCCCTGGACTGGGGTCCCGGCGGCG
GCCCAGATCTCATCGTCGATGACGGTGGTGACGCCACGTTGTTGATCCAC
GAGGGAGTCAAAGCTGAGGAGATCTACGAGAAGACCGGGAAGT
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