CF835207

Overview
NameCF835207
Unique NameCF835207
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length593
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1840 contig Csv1_Contig1840:24..616. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835207 vs. ExPASy Swiss-Prot
Match: SAHH_THEEB (Adenosylhomocysteinase OS=Thermosynechococcus elongatus (strain BP-1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.674e-11
Identity = 55/149 (36.91%), Postives = 71/149 (47.65%), Query Frame = 2
Query:  107 MALSVEKSASGREFKGEDLSXADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNVGGTQDHAAAA-IGRDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGD--ATLL 544
            M  S  KS +      +DLS A  G+  IE A  EMP L   R  F   +PF G ++    H+T +TA L   L A GA+    + N   TQD  AA+ +      VFA KGE    Y      ALD      P++I+DDG D  ATL+
Sbjct:    1 MVSSPIKSEAPVRHDVKDLSLAPLGQQRIEWASREMPVLRQIRDRFEKEKPFAGIRLAACCHVTTETANLAIALKAGGADAVLIASNPLSTQDDVAASLVVNYGIPVFAQKGEDTATYMRHVNIALD----HRPNIIIDDGCDVVATLV 145          
BLAST of CF835207 vs. ExPASy Swiss-Prot
Match: SAHH_GLOVI (Adenosylhomocysteinase OS=Gloeobacter violaceus GN=ahcY PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.674e-11
Identity = 48/130 (36.92%), Postives = 62/130 (47.69%), Query Frame = 2
Query:  146 FKGEDLSXADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNVGGTQDHAAAAIGRD-SASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGD 532
            ++  +L  A  GR  IE A  EMP L   R  F   +P  G +I+   H+T +TA L   L A GA+    + N   TQD  AA++  D    VFA KGE    Y      ALD      P +I+DDG D
Sbjct:   12 YEVRNLELAAEGRQRIEWAAREMPVLKQLRQRFSQERPLAGIRISACCHVTTETANLAVALKAAGADALLIASNPLSTQDDVAASLVVDHGIPVFALKGEDTATYLRHVRVALD----HRPQIIIDDGSD 137          
The following BLAST results are available for this feature:
BLAST of CF835207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 242
Match NameE-valueIdentityDescription
SAHH_THEEB4.674e-1136.91Adenosylhomocysteinase OS=Thermosynechococcus elon... [more]
SAHH_GLOVI4.674e-1136.92Adenosylhomocysteinase OS=Gloeobacter violaceus GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06N13_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06N13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835207 ID=CF835207; Name=CF835207; organism=Citrus sinensis; type=EST; length=593bp
CGTTTAGGTTGTACATCATTCACTTTGTTTGGTTAGTTCCCCTAGAGAGA
GNAGATTGCCCTCTCTTCCTTCTTTCTTTTAGATCTATCAATACTATTAA
TCAACCATGGCTTTGTCCGTCGAGAAATCCGCTAGCGGTCGTGAATTCAA
GGGGGAGGATCTGTCCCANGCTGACTTCGGCCGCCTCGAAATCGAGTTGG
CCGAAGTCGAAATGCCGGGGCTCATGGCTTGCCGCGCCGAGTTCGGCCCT
TCACAGCCTTTCAAAGGAGCCAAGATCACCGGTTCACTCCACATGACCAT
CCAGACGGCCGTCCTCATCGAGACACTCACCGCTCTCGGCGCCGAAGTCC
GCTGGTGCTCCTGCAACGTGGGGGGAACCCAAGACCACGCGGCCGCCGCC
ATCGGGCGTGACTCCGCCTCCGTCTTTGCCTGGAAGGGTGAGACCCTCCA
GGAGTACTGGTGGTGCACGGAGAAAGCCCTGGACTGGGGTCCCGGCGGCG
GCCCAGATCTCATCGTCGATGACGGTGGTGACGCCACGTTGTTGATCCAC
GAGGGAGTCAAAGCTGAGGAGATCTACGAGAAGACCGGGAAGT
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