CF835207

Overview
NameCF835207
Unique NameCF835207
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length593
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1840 contig Csv1_Contig1840:24..616. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835207 vs. ExPASy Swiss-Prot
Match: SAHH_DESVM (Adenosylhomocysteinase OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=ahcY PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 6.244e-48
Identity = 89/141 (63.12%), Postives = 110/141 (78.01%), Query Frame = 2
Query:  149 KGEDLSXADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNVGGTQDHAAAAIGRDS-ASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAE 568
            K  D++ ADFG  E++L+E E+PGLM     +G S+P KG ++TGSLHMTIQTA+LI+TL  LGA++RW SCN+  TQDHAAAAI     A VFAWKGETL++YWWCTE AL W  G GPDL+VDDGGDATL+IH+GV+ E
Sbjct:   17 KVADMALADFGHKEMQLSEREVPGLMELIRMYGVSKPLKGLRVTGSLHMTIQTAMLIKTLYELGADIRWASCNIFSTQDHAAAAIADSGMAKVFAWKGETLEDYWWCTEMALTWPDGSGPDLLVDDGGDATLMIHKGVEVE 157          
BLAST of CF835207 vs. ExPASy Swiss-Prot
Match: SAHH_PROVI (Adenosylhomocysteinase OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=ahcY PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 8.155e-48
Identity = 92/157 (58.60%), Postives = 119/157 (75.80%), Query Frame = 2
Query:  128 SASGREFKGEDLSXADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNVGGTQDHAAAAIGRDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAE---EIYEKTG 589
            +A+  ++K  D+S A++GR EI++AE EMPGLMA R ++   +P  G++I+GSLHMTIQTAVLIETL  LGA+VRW SCN+  TQDHAAAAI      VFAWKGE+L+EYWWCT + LD+G G GP+LIVDDGGDAT++I  G K E    +++K G
Sbjct:    4 AATALDYKVADISLAEWGRKEIDIAEKEMPGLMAIRNKYKGQKPLAGSRISGSLHMTIQTAVLIETLVELGADVRWASCNIFSTQDHAAAAIAVTGVPVFAWKGESLEEYWWCTRQILDFGNGLGPNLIVDDGGDATMMIILGYKVENNPSMFDKGG 160          
BLAST of CF835207 vs. ExPASy Swiss-Prot
Match: SAHH_METS4 (Adenosylhomocysteinase OS=Methylobacterium sp. (strain 4-46) GN=ahcY PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 8.155e-48
Identity = 92/145 (63.45%), Postives = 109/145 (75.17%), Query Frame = 2
Query:  134 SGREFKGEDLSXADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNVGGTQDHAAAAIGRDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAE 568
            S +++   D+  ADFGR EI +AE EMPGLMA RAE+  SQP KGAKI GSLHMTIQTAVLIETL ALGA++RW SCN+  TQDHAAAAI      VFA KGETL EYW  T +  DW  GG P++I+DDGGDAT+ +H G++AE
Sbjct:    3 SNQDYIVRDIGLADFGRKEIAIAETEMPGLMAVRAEYAASQPLKGAKIAGSLHMTIQTAVLIETLKALGADIRWVSCNIYSTQDHAAAAIAAAGIPVFAVKGETLTEYWDYTARLFDWHDGGMPNMILDDGGDATMFVHAGLRAE 147          
BLAST of CF835207 vs. ExPASy Swiss-Prot
Match: SAHH_METPB (Adenosylhomocysteinase OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=ahcY PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 8.155e-48
Identity = 92/146 (63.01%), Postives = 109/146 (74.66%), Query Frame = 2
Query:  131 ASGREFKGEDLSXADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNVGGTQDHAAAAIGRDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAE 568
            A+  ++   D+  AD+GR EI +AE EMPGLMA RAE+G SQP KGAKI GSLHMTIQTAVLIETL  LGA++RW SCN+  TQDHAAAAI      VFA KGETL EYW  T K  DW  GG P++I+DDGGDAT+ +H G++AE
Sbjct:    2 AAANDYIVRDIGLADYGRKEISIAETEMPGLMATRAEYGASQPLKGAKIAGSLHMTIQTAVLIETLKHLGADIRWVSCNIYSTQDHAAAAIAAAGIPVFAVKGETLTEYWDYTSKLFDWHDGGMPNMILDDGGDATMFVHLGLRAE 147          
BLAST of CF835207 vs. ExPASy Swiss-Prot
Match: SAHH_BRASB (Adenosylhomocysteinase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=ahcY PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 8.155e-48
Identity = 91/138 (65.94%), Postives = 107/138 (77.54%), Query Frame = 2
Query:  155 EDLSXADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNVGGTQDHAAAAIGRDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAE 568
            +D+S A+FGR EI LAE EMPGLMA R E+GP QP KGA+I GSLHMTIQTAVLIETL ALGA++RW SCN+  TQDHAAAAI      VFA KGETL +YW  T K  DW  GG P++I+DDGGDAT+ +H G++AE
Sbjct:   13 KDISLAEFGRKEISLAETEMPGLMATREEYGPKQPLKGARIAGSLHMTIQTAVLIETLAALGADIRWVSCNIYSTQDHAAAAIAAAGIPVFAVKGETLADYWDYTAKLFDWHGGGHPNMILDDGGDATMYVHLGLRAE 150          
BLAST of CF835207 vs. ExPASy Swiss-Prot
Match: SAHH_RALSO (Adenosylhomocysteinase OS=Ralstonia solanacearum GN=ahcY PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.065e-47
Identity = 91/138 (65.94%), Postives = 107/138 (77.54%), Query Frame = 2
Query:  158 DLSXADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNVGGTQDHAAAAIGRDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEE 571
            D+  AD+GR EI +AE EMPGLMA R EF  SQP KGA+I GSLHMTIQTAVLIETL ALGA+VRW SCN+  TQDHAAAAI      VFA+KGE+L+EYW  T +  +W  GG P++I+DDGGDATLL+H G KAE+
Sbjct:   15 DIKLADWGRKEIAIAETEMPGLMAIRDEFAASQPLKGARIAGSLHMTIQTAVLIETLKALGADVRWASCNIFSTQDHAAAAIAASGTPVFAFKGESLKEYWDFTHRIFEWADGGTPNMILDDGGDATLLLHLGAKAEQ 152          
BLAST of CF835207 vs. ExPASy Swiss-Prot
Match: SAHH_HYPNA (Adenosylhomocysteinase OS=Hyphomonas neptunium (strain ATCC 15444) GN=ahcY PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.065e-47
Identity = 92/146 (63.01%), Postives = 114/146 (78.08%), Query Frame = 2
Query:  131 ASGREFKGEDLSXADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNVGGTQDHAAAAIGRDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAE 568
            A+ +++  +D+S A++GR EI +AE EMPGLMA R EFGPSQP KGA+I GSLHMTIQTAVLI+TL ALGA+VRW SCN+  TQDHAAAAI     +VFA+KGETL+EYW  T++   W  G GP+LI+DDGGDAT+ +  G KAE
Sbjct:    5 AAPQDYFVKDISLAEYGRKEIAIAETEMPGLMAAREEFGPSQPLKGARICGSLHMTIQTAVLIQTLEALGAQVRWVSCNIYSTQDHAAAAIADAGTAVFAYKGETLEEYWDYTDRMFQWPDGEGPNLILDDGGDATMYLILGEKAE 150          
BLAST of CF835207 vs. ExPASy Swiss-Prot
Match: SAHH_RHOPS (Adenosylhomocysteinase OS=Rhodopseudomonas palustris (strain BisB5) GN=ahcY PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.391e-47
Identity = 90/138 (65.22%), Postives = 108/138 (78.26%), Query Frame = 2
Query:  155 EDLSXADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNVGGTQDHAAAAIGRDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAE 568
            +D+  A+FGR EI LAE EMPGLMA R E+GP QP KGA+I GSLHMTIQTAVLIETLTALGA+VRW SCN+  TQDHAAAAI      VFA KGE+L++YW  T +  DW  GG P++I+DDGGDAT+ +H G++AE
Sbjct:   11 KDIGLAEFGRKEISLAETEMPGLMATREEYGPKQPLKGARIAGSLHMTIQTAVLIETLTALGADVRWVSCNIYSTQDHAAAAIAAAGIPVFAIKGESLEDYWDYTARMFDWHGGGTPNMILDDGGDATMYVHLGLRAE 148          
BLAST of CF835207 vs. ExPASy Swiss-Prot
Match: SAHH_CHLCH (Adenosylhomocysteinase OS=Chlorobium chlorochromatii (strain CaD3) GN=ahcY PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.391e-47
Identity = 93/146 (63.70%), Postives = 109/146 (74.66%), Query Frame = 2
Query:  131 ASGREFKGEDLSXADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNVGGTQDHAAAAIGRDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAE 568
            A    +K  D+S A++GR EIE+AE EMPGLMA R ++   +P KGA+I GSLHMTIQTAVLIETL  LGA VRW SCN+  TQDHAAAAI +    VFAWKGETL EYWWCT + L++  G GP+LIVDDGGDATL+I  G K E
Sbjct:    5 AEALAYKVADISLAEWGRKEIEIAEKEMPGLMALRKKYAGQKPLKGARIAGSLHMTIQTAVLIETLVDLGANVRWASCNIFSTQDHAAAAIAQAGVPVFAWKGETLDEYWWCTRQILEFDGGLGPNLIVDDGGDATLMIILGHKIE 150          
BLAST of CF835207 vs. ExPASy Swiss-Prot
Match: SAHH_CAUCR (Adenosylhomocysteinase OS=Caulobacter crescentus GN=ahcY PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 2.373e-47
Identity = 95/139 (68.35%), Postives = 106/139 (76.26%), Query Frame = 2
Query:  155 EDLSXADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNVGGTQDHAAAAIGRDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEE 571
            +D+S ADFGR EI +AE EMPGLMA RAE+GP Q  KGA+I GSLHMTIQTAVLIETLTALGAEVRW SCN+  TQDHAAAAI      VFA+KGE L EYW    K  +W  GG P+LI+DDGGDATLL   G KAE+
Sbjct:    7 KDISLADFGRKEIAIAETEMPGLMATRAEYGPQQILKGARIAGSLHMTIQTAVLIETLTALGAEVRWASCNIFSTQDHAAAAIAAAGVPVFAFKGENLVEYWEYAHKIFEWHDGGYPNLILDDGGDATLLCVLGPKAEK 145          
The following BLAST results are available for this feature:
BLAST of CF835207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 242
Match NameE-valueIdentityDescription
SAHH_DESVM6.244e-4863.12Adenosylhomocysteinase OS=Desulfovibrio vulgaris (... [more]
SAHH_PROVI8.155e-4858.60Adenosylhomocysteinase OS=Prosthecochloris vibriof... [more]
SAHH_METS48.155e-4863.45Adenosylhomocysteinase OS=Methylobacterium sp. (st... [more]
SAHH_METPB8.155e-4863.01Adenosylhomocysteinase OS=Methylobacterium populi ... [more]
SAHH_BRASB8.155e-4865.94Adenosylhomocysteinase OS=Bradyrhizobium sp. (stra... [more]
SAHH_RALSO1.065e-4765.94Adenosylhomocysteinase OS=Ralstonia solanacearum G... [more]
SAHH_HYPNA1.065e-4763.01Adenosylhomocysteinase OS=Hyphomonas neptunium (st... [more]
SAHH_RHOPS1.391e-4765.22Adenosylhomocysteinase OS=Rhodopseudomonas palustr... [more]
SAHH_CHLCH1.391e-4763.70Adenosylhomocysteinase OS=Chlorobium chlorochromat... [more]
SAHH_CAUCR2.373e-4768.35Adenosylhomocysteinase OS=Caulobacter crescentus G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06N13_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06N13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835207 ID=CF835207; Name=CF835207; organism=Citrus sinensis; type=EST; length=593bp
CGTTTAGGTTGTACATCATTCACTTTGTTTGGTTAGTTCCCCTAGAGAGA
GNAGATTGCCCTCTCTTCCTTCTTTCTTTTAGATCTATCAATACTATTAA
TCAACCATGGCTTTGTCCGTCGAGAAATCCGCTAGCGGTCGTGAATTCAA
GGGGGAGGATCTGTCCCANGCTGACTTCGGCCGCCTCGAAATCGAGTTGG
CCGAAGTCGAAATGCCGGGGCTCATGGCTTGCCGCGCCGAGTTCGGCCCT
TCACAGCCTTTCAAAGGAGCCAAGATCACCGGTTCACTCCACATGACCAT
CCAGACGGCCGTCCTCATCGAGACACTCACCGCTCTCGGCGCCGAAGTCC
GCTGGTGCTCCTGCAACGTGGGGGGAACCCAAGACCACGCGGCCGCCGCC
ATCGGGCGTGACTCCGCCTCCGTCTTTGCCTGGAAGGGTGAGACCCTCCA
GGAGTACTGGTGGTGCACGGAGAAAGCCCTGGACTGGGGTCCCGGCGGCG
GCCCAGATCTCATCGTCGATGACGGTGGTGACGCCACGTTGTTGATCCAC
GAGGGAGTCAAAGCTGAGGAGATCTACGAGAAGACCGGGAAGT
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