CF835215

Overview
NameCF835215
Unique NameCF835215
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length669
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835215 vs. ExPASy Swiss-Prot
Match: C81F1_ARATH (Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CYP81F1 PE=2 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 3.922e-23
Identity = 59/141 (41.84%), Postives = 81/141 (57.45%), Query Frame = 3
Query:    6 FFQLCVKETLRLHPVAPLLLPRECGERCQINGFDIPVKAKVFVNAWAIGRDPKDWTEPASFIPERFLDH-SIDYKGTNFEFIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWKLPNGMKHEDLDMTEAFATTVRRKQDL 425
            + Q  V ET RL PVAP L+PR   +  +I G+D+P    V VNAWAI RDP+ W EP  F P+R+ D    DY    ++ +PFG GRR CPG   G   V L L  L+  F+W+    +K E++DM+E+    +R+   L
Sbjct:  350 YLQNVVSETFRLFPVAPFLIPRSPTDDMKIGGYDVPRDTIVMVNAWAIHRDPEIWEEPEKFNPDRYNDGCGSDY--YVYKLMPFGNGRRTCPGAGLGQRIVTLALGSLIQCFEWE---NVKGEEMDMSESTGLGMRKMDPL 485          
BLAST of CF835215 vs. ExPASy Swiss-Prot
Match: THAD_ARATH (Cytochrome P450 705A5 OS=Arabidopsis thaliana GN=CYP705A5 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.490e-22
Identity = 60/151 (39.74%), Postives = 81/151 (53.64%), Query Frame = 3
Query:    6 FFQLCVKETLRLHPVAPLLLPRECGERCQINGFDIPVKAKVFVNAWAIGRDPKDWTEPASFIPERFLDHS-----IDYKGTNFEFIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWKLPNGMKHEDLDMTEAFATTVRRKQDLCMIPIP 443
            + Q  VKE LRLHP  P++  R   E C+I GF IP K ++FVN +AI RDP  W +P  F PERFL  S      + +    ++IPFG+GRR CPG       V   + M++ HFDW +    K E ++M E    T+     L   P+P
Sbjct:  362 YLQAIVKEGLRLHPPGPVV--RTFKETCEIKGFYIPEKTRLFVNVYAIMRDPDFWEDPEEFKPERFLASSRLGEEDEKREDMLKYIPFGSGRRACPGSHLAYTVVGSVIGMMVQHFDWII----KGEKINMKEGGTMTLTMAHPLKCTPVP 506          
BLAST of CF835215 vs. ExPASy Swiss-Prot
Match: C71AR_ARATH (Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=CYP71A27 PE=2 SV=3)

HSP 1 Score: 105.145 bits (261), Expect = 3.320e-22
Identity = 60/150 (40.00%), Postives = 84/150 (56.00%), Query Frame = 3
Query:    6 FFQLCVKETLRLHPVAPLLLPRECGERCQINGFDIPVKAKVFVNAWAIGRDPKDWTEPAS-FIPERFLDHSIDYKGTNFEFIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWKLPNGMKHEDL-DMTEAFATTVRRKQDLCMIPIPYH 449
            +    +KE LRLHP  PLL  R   E  Q+ G+DI     V +NAWA+ R+P  W   A+ + PER   +   ++ T+ +F+PFGAGRR+CPG+ F L   +L LA L+  F+W+L  G   +D  D+ EA    V RK  L + P   H
Sbjct:  349 YLHCVIKEGLRLHPSGPLLF-RLPSEDVQLKGYDISAGTHVIINAWALQRNPAIWGLDANEYRPERHFWYEFGFQRTDSKFVPFGAGRRLCPGIGFSLVLSKLALANLVKRFNWRLKVGPVGDDKPDLAEASGIDVCRKFPLIVFPSIAH 497          
BLAST of CF835215 vs. ExPASy Swiss-Prot
Match: C78AB_ORYSJ (Cytochrome P450 78A11 OS=Oryza sativa subsp. japonica GN=CYP78A11 PE=1 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 5.663e-22
Identity = 59/152 (38.82%), Postives = 78/152 (51.32%), Query Frame = 3
Query:    6 FFQLCVKETLRLHPVAPLL--LPRECGERCQINGFDIPVKAKVFVNAWAIGRDPKDWTEPASFIPERFLDHS----IDYKGTNFEFIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWKLPNGMKHEDLDMTEAFATTVRRKQDLCMIPIP 443
            + Q  VKETLR HP  PLL        +    NG  +P      VN WAI  D + W +P +F PERF+       +D +G +    PFGAGRR+CPG + GLA+V L +A L++ FDW LP+G     LD  E    ++  K  L     P
Sbjct:  400 YLQAVVKETLRAHPPGPLLSWARLATADVGLANGMVVPAGTTAMVNMWAITHDGEVWADPEAFAPERFIPSEGGADVDVRGGDLRLAPFGAGRRVCPGKNLGLATVTLWVARLVHAFDWFLPDGSPPVSLD--EVLKLSLEMKTPLAAAATP 549          
BLAST of CF835215 vs. ExPASy Swiss-Prot
Match: TCMO_HELTU (Trans-cinnamate 4-monooxygenase OS=Helianthus tuberosus GN=CYP73A1 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 9.660e-22
Identity = 49/127 (38.58%), Postives = 72/127 (56.69%), Query Frame = 3
Query:    6 FFQLCVKETLRLHPVAPLLLPRECGERCQINGFDIPVKAKVFVNAWAIGRDPKDWTEPASFIPERFLDH--SIDYKGTNFEFIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWKLPNGMKHEDLD 380
            + Q  VKETLRL    PLL+P       ++ GFDIP ++K+ VNAW +  +P  W +P  F PERFL+    ++  G +F ++PFG GRR CPG+   L  + + +  L+ +F+   P G    D D
Sbjct:  356 YLQAVVKETLRLRMAIPLLVPHMNLHDAKLGGFDIPAESKILVNAWWLANNPDQWKKPEEFRPERFLEEEAKVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGQSKIDTD 482          
BLAST of CF835215 vs. ExPASy Swiss-Prot
Match: C78A4_PINRA (Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.648e-21
Identity = 58/155 (37.42%), Postives = 82/155 (52.90%), Query Frame = 3
Query:    6 FFQLCVKETLRLHPVAPLLL-PRECGERCQI-NGFDIPVKAKVFVNAWAIGRDPKDWTEPASFIPERFL----DHSIDYKGTNFEFIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWKLPNGMKHEDLDMTEAFATTVRRKQDLCMIPIPYHP 452
            + Q  VKE LR+HP  PLL   R   E   + +G  +P      VN W+I  DP  W  P  F PERF+       +D +G +    PFGAGRR+CPG + GLA+V L +A LL+HF+W LP+      +D++E    +    + L  +P+   P
Sbjct:  396 YIQAVVKEALRMHPPGPLLSWARLSTEDVNMGDGMCVPAGTTAMVNMWSITHDPNIWESPYEFRPERFVVFEGGEEVDVRGNDLRLAPFGAGRRVCPGKALGLATVNLWVAKLLHHFEW-LPHA--EHPVDLSEVLKLSCEMARPLHCVPVTRVP 547          
BLAST of CF835215 vs. ExPASy Swiss-Prot
Match: TCMO_CICAR (Trans-cinnamate 4-monooxygenase OS=Cicer arietinum GN=CYP73A19 PE=2 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 2.152e-21
Identity = 48/125 (38.40%), Postives = 72/125 (57.60%), Query Frame = 3
Query:    6 FFQLCVKETLRLHPVAPLLLPRECGERCQINGFDIPVKAKVFVNAWAIGRDPKDWTEPASFIPERFLDHS--IDYKGTNFEFIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWKLPNGMKHED 374
            + Q  +KETLRL    PLL+P       +++GFDIP ++K+ VNAW +  +P  W +P  F PERFL+    ++  G +F ++PFG GRR CPG+   L  + + L  L+ +F+   P G    D
Sbjct:  355 YLQAVIKETLRLRMAIPLLVPHMNLHDAKLSGFDIPAESKILVNAWWLANNPAQWKKPEEFRPERFLEEESHVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSKID 479          
BLAST of CF835215 vs. ExPASy Swiss-Prot
Match: C78A1_MAIZE (Cytochrome P450 78A1 OS=Zea mays GN=CYP78A1 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.811e-21
Identity = 61/154 (39.61%), Postives = 77/154 (50.00%), Query Frame = 3
Query:    6 FFQLCVKETLRLHPVAPLL----LPRECGERCQINGFDIPVKAKVFVNAWAIGRDPKDWTEPASFIPERFLDHS----IDYKGTNFEFIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWKLPNGMKHEDLDMTEAFATTVRRKQDLCMIPIP 443
            + Q  VKETLR HP  PLL    L       C  NG  +P      VN WAI  D   W +P +F PERFL       +D +G +    PFGAGRR+CPG + GL +V L +A L++ F W LP+G     LD  E    ++  K  L    IP
Sbjct:  395 YLQAVVKETLRAHPPGPLLSWARLATADVPLC--NGMVVPAGTTAMVNMWAITHDAAVWADPDAFAPERFLPSEGGADVDVRGVDLRLAPFGAGRRVCPGKNLGLTTVGLWVARLVHAFQWALPDGAAAVCLD--EVLKLSLEMKTPLVAAAIP 544          
BLAST of CF835215 vs. ExPASy Swiss-Prot
Match: TCMO_ZINEL (Trans-cinnamate 4-monooxygenase OS=Zinnia elegans GN=CYP73A12 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.262e-21
Identity = 48/130 (36.92%), Postives = 75/130 (57.69%), Query Frame = 3
Query:    6 FFQLCVKETLRLHPVAPLLLPRECGERCQINGFDIPVKAKVFVNAWAIGRDPKDWTEPASFIPERFLDH--SIDYKGTNFEFIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWKLPNGMKHEDLDMTE 389
            + Q  +KETLRL    PLL+P       ++ G+DIP ++K+ VNAW +  +P  W +P  F PERFL+    ++  G +F ++PFG GRR CPG+   L  + + +  L+ +F+   P G   + +D TE
Sbjct:  356 YLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWWLANNPDQWKKPEEFRPERFLEEESKVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPG--QDKVDTTE 483          
BLAST of CF835215 vs. ExPASy Swiss-Prot
Match: TCMO_GLYEC (Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza echinata GN=CYP73A14 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.262e-21
Identity = 47/125 (37.60%), Postives = 71/125 (56.80%), Query Frame = 3
Query:    6 FFQLCVKETLRLHPVAPLLLPRECGERCQINGFDIPVKAKVFVNAWAIGRDPKDWTEPASFIPERFLDHS--IDYKGTNFEFIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWKLPNGMKHED 374
            + Q  +KETLRL    PLL+P       ++ G+DIP ++K+ VNAW +  +P +W  P  F PERFL+    ++  G +F ++PFG GRR CPG+   L  + + L  L+ +F+   P G    D
Sbjct:  356 YLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWWLANNPANWKRPEEFRPERFLEEESHVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSKLD 480          
The following BLAST results are available for this feature:
BLAST of CF835215 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 277
Match NameE-valueIdentityDescription
C81F1_ARATH3.922e-2341.84Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CY... [more]
THAD_ARATH1.490e-2239.74Cytochrome P450 705A5 OS=Arabidopsis thaliana GN=C... [more]
C71AR_ARATH3.320e-2240.00Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=C... [more]
C78AB_ORYSJ5.663e-2238.82Cytochrome P450 78A11 OS=Oryza sativa subsp. japon... [more]
TCMO_HELTU9.660e-2238.58Trans-cinnamate 4-monooxygenase OS=Helianthus tube... [more]
C78A4_PINRA1.648e-2137.42Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 P... [more]
TCMO_CICAR2.152e-2138.40Trans-cinnamate 4-monooxygenase OS=Cicer arietinum... [more]
C78A1_MAIZE2.811e-2139.61Cytochrome P450 78A1 OS=Zea mays GN=CYP78A1 PE=2 S... [more]
TCMO_ZINEL6.262e-2136.92Trans-cinnamate 4-monooxygenase OS=Zinnia elegans ... [more]
TCMO_GLYEC6.262e-2137.60Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza ech... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06N17_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06N17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835215 ID=CF835215; Name=CF835215; organism=Citrus sinensis; type=EST; length=669bp
TGAAATTTTTCCAATTATGTGTTAAAGAGACTTTGAGATTACATCCTGTT
GCCCCGTTGCTACTTCCAAGAGAATGTGGAGAGAGATGTCAAATTAATGG
ATTTGACATTCCTGTGAAAGCTAAAGTTTTTGTTAATGCATGGGCGATTG
GAAGAGATCCCAAGGACTGGACTGAACCTGCGAGCTTTATTCCAGAGAGG
TTCCTCGATCATTCTATTGACTACAAGGGTACTAATTTTGAATTCATACC
ATTTGGAGCTGGTAGGAGGATATGCCCTGGAATGTCATTTGGTCTGGCCA
GCGTGGAACTTCCACTGGCGATGCTATTATACCATTTTGACTGGAAACTA
CCAAATGGTATGAAGCATGAAGATTTGGACATGACCGAGGCCTTTGCCAC
GACAGTAAGAAGAAAACAAGATTTGTGCATGATTCCTATTCCTTACCATC
CTTCATCTGTTGCATAAGAACTAAAGGAAAATTTTATTATTATTCTTATT
AGTATTTGTTATCAACTGTCTCTGAAACTCTTTTTGTTTTTGTAGACCTT
TGCTGGTTCCTGAGATTTAAATTCATGGTGTACACTTTTGTTTCTCTCTG
TCTTACTCTCTCCNTAAGTTTTACTTTTTTTTTGGATAAAATAAACAGCT
AATATTTTCATGATTGGAA
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