CF835215

Overview
NameCF835215
Unique NameCF835215
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length669
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835215 vs. ExPASy Swiss-Prot
Match: C13B1_CAEEL (Putative cytochrome P450 cyp-13B1 OS=Caenorhabditis elegans GN=cyp-13B1 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 5.874e-11
Identity = 41/114 (35.96%), Postives = 60/114 (52.63%), Query Frame = 3
Query:    3 KFFQLCVKETLRLHPVAPLLLPRECGERCQINGFDIPVKAKVFVNAWAIGRDPKDWTEPAS-FIPERFLDHSIDYKGTNFEFIPFGAGRRICPGMSFGLASVELPLAMLLYHFD 341
            K+    V+E+LRL+PVA     REC +   +    I    K+  +  ++ R  + W E A  F+PER+L+ S  +      +IPFGAG R C GM  GL+  +  LA LL  +D
Sbjct:  368 KYLDAVVRESLRLYPVAWFACSRECVKPTTLGDIYIDKGVKIEADVMSLHRSKEIWGENADDFVPERWLEPSSRH---TMSWIPFGAGPRQCVGMRLGLSEAKTALAHLLRRYD 478          
BLAST of CF835215 vs. ExPASy Swiss-Prot
Match: C13A6_CAEEL (Putative cytochrome P450 CYP13A6 OS=Caenorhabditis elegans GN=cyp-13A6 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.874e-11
Identity = 35/116 (30.17%), Postives = 60/116 (51.72%), Query Frame = 3
Query:    3 KFFQLCVKETLRLHPVAPLLLPRECGERCQINGFDIPVKAKVFVNAWAIGRDPKDWTEPA-SFIPERFLDHSIDYKGTNFEFIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWK 347
            K+ +  +KETLRL+P+      R+C     ING +      + V+ W +  +P+ W E    F PER+ + + ++   N  +IPFG+G R C GM       ++ LA +L  + ++
Sbjct:  372 KYLECVMKETLRLYPLGTTANTRKCMRETTINGVNFDEGMNIQVDTWTLHHNPRIWGEDVEDFKPERWENGACEHLEHNGSYIPFGSGPRQCIGMRLAQMEQKILLAQILKEYSFR 487          
BLAST of CF835215 vs. ExPASy Swiss-Prot
Match: CP4FB_HUMAN (Cytochrome P450 4F11 OS=Homo sapiens GN=CYP4F11 PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 7.672e-11
Identity = 40/112 (35.71%), Postives = 60/112 (53.57%), Query Frame = 3
Query:    6 FFQLCVKETLRLHPVAPLLLPRECGERCQI-NGFDIPVKAKVFVNAWAIGRDPKDWTEPASFIPERFLDHSIDYKGTNFEFIPFGAGRRICPGMSFGLASVELPLAMLLYHF 338
            F  +C+KE+LRLHP  P++  R C +   + +G  IP      +N   I  +P  W +P  + P RF   +I  +     FIPF AG R C G +F +A +++ LA+ L HF
Sbjct:  380 FLTMCIKESLRLHPPVPVI-SRCCTQDFVLPDGRVIPKGIVCLINIIGIHYNPTVWPDPEVYDPFRFNQENIKERSP-LAFIPFSAGPRNCIGQAFAMAEMKVVLALTLLHF 489          
BLAST of CF835215 vs. ExPASy Swiss-Prot
Match: CP2DE_BOVIN (Cytochrome P450 2D14 OS=Bos taurus GN=CYP2D14 PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 7.672e-11
Identity = 45/139 (32.37%), Postives = 58/139 (41.73%), Query Frame = 3
Query:   21 VKETLRLHPVAPLLLPRECGERCQINGFDIPVKAKVFVNAWAIGRDPKDWTEPASFIPERFLDHSIDYKGTNFEFIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWKLPNGMKHEDLDMTEAFATTVRRKQDLCMIP 437
            V E  R   + PL LP       ++ GF IP    +  N  ++ +D   W +P  F PE FLD    +      FIPF AGRR C G       + L    LL HF + +P G          AF  T    Q LC +P
Sbjct:  363 VHEVQRFADIVPLGLPHMTSRDIEVQGFHIPKGTTLITNLSSVLKDETVWEKPFRFHPEHFLDAQGRFVKQE-AFIPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPAGQPRPSEHGVFAFLVTPAPYQ-LCAVP 499          
BLAST of CF835215 vs. ExPASy Swiss-Prot
Match: CP1A5_CHICK (Cytochrome P450 1A5 OS=Gallus gallus GN=CYP1A5 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.672e-11
Identity = 41/139 (29.50%), Postives = 67/139 (48.20%), Query Frame = 3
Query:   21 VKETLRLHPVAPLLLPRECGERCQINGFDIPVKAKVFVNAWAIGRDPKDWTEPASFIPERFLD------HSIDYKGTNFEFIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWKLPNGMKHEDLDMTEAFATTVRRKQ 419
            + E  R     P  +P        +NG+ IP    VF+N W +  D K W +P +F PERFL+      + +D +    + + FG G+R C G + G   V L L+ LL   ++ + +G K    DMT  +  +++ K+
Sbjct:  381 ILEMFRHSSFMPFTIPHSTTRDTVLNGYYIPKDRCVFINQWQVNHDEKLWKDPQAFNPERFLNAEGTEVNKVDAE----KVMTFGLGKRRCIGENIGKWEVFLFLSTLLQQLEFSIQDGKK---ADMTPIYGLSMKHKR 512          
BLAST of CF835215 vs. ExPASy Swiss-Prot
Match: C518A_DICDI (Probable cytochrome P450 518A1 OS=Dictyostelium discoideum GN=cyp518a1 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.672e-11
Identity = 39/112 (34.82%), Postives = 58/112 (51.79%), Query Frame = 3
Query:    9 FQLCVKETLRLHPVAPLLLPRECGERCQING--FDIPVKAKVFVNAWAIGRDPKDWTEPASFIPERFLDHSIDYKGTNFEFIPFGAGRRICPGMSFGLASVELPLAMLLYHF 338
            F   +KE LRL+P  P  +PR+  +  +ING    IP   ++  + ++I RD   W  P  F PERFLD   D    N  + P+G G + C GM F    + + L+ L+ +F
Sbjct:  352 FNAALKEVLRLYPPVPFGVPRQVNQSFEINGGSLKIPKGTQIIQSLYSIFRDENYWDSPDQFKPERFLDQ--DSHSNN--YFPYGIGVKNCIGMGFSQDELYISLSNLVLNF 459          
BLAST of CF835215 vs. ExPASy Swiss-Prot
Match: C13A2_CAEEL (Putative cytochrome P450 CYP13A2 OS=Caenorhabditis elegans GN=cyp-13A2 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.672e-11
Identity = 38/120 (31.67%), Postives = 64/120 (53.33%), Query Frame = 3
Query:    3 KFFQLCVKETLRLHPVAPLLLPRECGERCQINGFDIPVKAKVFVNAWAIGRDPKDWTEPA-SFIPERF-LDHSIDYKGTNFEFIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWKLPN 356
            K+    +KE LRL+P+A +   R+C +   +NG  I     V ++ W++  DP+ W E    F PER+  D  +++KG    ++PFG G R C GM   +   ++ L  LL ++ ++  N
Sbjct:  371 KYMDCVIKEALRLYPLASISNSRKCMKTTTVNGVKIEAGVYVQMDTWSLHYDPELWGEDVKEFKPERWSTDEPLEHKGA---YLPFGLGPRQCIGMRLAIMEQKILLTHLLKNYTFETGN 487          
The following BLAST results are available for this feature:
BLAST of CF835215 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 277
Match NameE-valueIdentityDescription
C13B1_CAEEL5.874e-1135.96Putative cytochrome P450 cyp-13B1 OS=Caenorhabditi... [more]
C13A6_CAEEL5.874e-1130.17Putative cytochrome P450 CYP13A6 OS=Caenorhabditis... [more]
CP4FB_HUMAN7.672e-1135.71Cytochrome P450 4F11 OS=Homo sapiens GN=CYP4F11 PE... [more]
CP2DE_BOVIN7.672e-1132.37Cytochrome P450 2D14 OS=Bos taurus GN=CYP2D14 PE=2... [more]
CP1A5_CHICK7.672e-1129.50Cytochrome P450 1A5 OS=Gallus gallus GN=CYP1A5 PE=... [more]
C518A_DICDI7.672e-1134.82Probable cytochrome P450 518A1 OS=Dictyostelium di... [more]
C13A2_CAEEL7.672e-1131.67Putative cytochrome P450 CYP13A2 OS=Caenorhabditis... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06N17_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06N17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835215 ID=CF835215; Name=CF835215; organism=Citrus sinensis; type=EST; length=669bp
TGAAATTTTTCCAATTATGTGTTAAAGAGACTTTGAGATTACATCCTGTT
GCCCCGTTGCTACTTCCAAGAGAATGTGGAGAGAGATGTCAAATTAATGG
ATTTGACATTCCTGTGAAAGCTAAAGTTTTTGTTAATGCATGGGCGATTG
GAAGAGATCCCAAGGACTGGACTGAACCTGCGAGCTTTATTCCAGAGAGG
TTCCTCGATCATTCTATTGACTACAAGGGTACTAATTTTGAATTCATACC
ATTTGGAGCTGGTAGGAGGATATGCCCTGGAATGTCATTTGGTCTGGCCA
GCGTGGAACTTCCACTGGCGATGCTATTATACCATTTTGACTGGAAACTA
CCAAATGGTATGAAGCATGAAGATTTGGACATGACCGAGGCCTTTGCCAC
GACAGTAAGAAGAAAACAAGATTTGTGCATGATTCCTATTCCTTACCATC
CTTCATCTGTTGCATAAGAACTAAAGGAAAATTTTATTATTATTCTTATT
AGTATTTGTTATCAACTGTCTCTGAAACTCTTTTTGTTTTTGTAGACCTT
TGCTGGTTCCTGAGATTTAAATTCATGGTGTACACTTTTGTTTCTCTCTG
TCTTACTCTCTCCNTAAGTTTTACTTTTTTTTTGGATAAAATAAACAGCT
AATATTTTCATGATTGGAA
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