CF835215

Overview
NameCF835215
Unique NameCF835215
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length669
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835215 vs. ExPASy Swiss-Prot
Match: C83A1_ARATH (Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CYP83A1 PE=1 SV=2)

HSP 1 Score: 159.458 bits (402), Expect = 1.483e-38
Identity = 74/145 (51.03%), Postives = 101/145 (69.66%), Query Frame = 3
Query:    6 FFQLCVKETLRLHPVAPLLLPRECGERCQINGFDIPVKAKVFVNAWAIGRDPKDW-TEPASFIPERFLDHSIDYKGTNFEFIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWKLPNGMKHEDLDMTEAFATTVRRKQDLCMIP 437
            +F+  VKETLR+ PV PLL+PR C +  +I G+DIP    V VNAWA+ RD K+W   P  F PERFL+  +D+KGT++EFIPFG+GRR+CPGM  G A +E+P A LL  F++KLPNGMK +D++M       + + Q L ++P
Sbjct:  352 YFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPERFLEKEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLSFNFKLPNGMKPDDINMDVMTGLAMHKSQHLKLVP 496          
BLAST of CF835215 vs. ExPASy Swiss-Prot
Match: C71BS_ARATH (Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=CYP71B28 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.483e-38
Identity = 73/116 (62.93%), Postives = 87/116 (75.00%), Query Frame = 3
Query:    6 FFQLCVKETLRLHPVAPLLLPRECGERCQINGFDIPVKAKVFVNAWAIGRDPKDWTEPASFIPERFLDHSIDYKGTNFEFIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWKLP 353
            +F+L VKE  RLHP APLLLPRE     +I G+DIP K ++ +NA+AI RDPK WT P  F P+RFLD SIDY+G NFE +PFG+GRRICPGM+ G+A VEL L  LLY FDW LP
Sbjct:  351 YFKLMVKEIFRLHPAAPLLLPRETLSHVKIQGYDIPAKTQIMINAYAIARDPKLWTNPDEFNPDRFLDSSIDYRGLNFELLPFGSGRRICPGMTMGIAIVELGLLNLLYFFDWGLP 466          
BLAST of CF835215 vs. ExPASy Swiss-Prot
Match: C71B1_THLAR (Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1 PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.937e-38
Identity = 71/145 (48.97%), Postives = 97/145 (66.90%), Query Frame = 3
Query:    6 FFQLCVKETLRLHPVAPLLLPRECGERCQINGFDIPVKAKVFVNAWAIGRDPKDWTEPASFIPERFLDHSIDYKGTNFEFIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWKLPNGMKHEDLDMTEAFATTVRRKQDLCMIPI 440
            +F+L +KET R+ P+ P+L+PR   +  +I G+D+P K  + VN WA+   P  W +P +F PERF+D+  D+KG NFE +PFG+GRR+CPGM  GLA V L L  LLY FDWKLPNGMK E+L + E +     +K  L  IP+
Sbjct:  347 YFKLVLKETFRISPIVPVLVPRVAAKDLKIAGYDVPEKTWIHVNMWAVHMSPSIWKDPETFNPERFIDNQTDFKGLNFELLPFGSGRRMCPGMGMGLAVVHLTLINLLYRFDWKLPNGMKAEELSIEENYGLICVKKLPLEAIPV 491          
BLAST of CF835215 vs. ExPASy Swiss-Prot
Match: C80A1_BERST (Berbamunine synthase OS=Berberis stolonifera GN=CYP80A1 PE=1 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 7.362e-38
Identity = 72/144 (50.00%), Postives = 96/144 (66.67%), Query Frame = 3
Query:    6 FFQLCVKETLRLHPVAPLLLPRECGERCQINGFDIPVKAKVFVNAWAIGRDPKDWTEPASFIPERFLDHSIDYKGTNFEFIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWKLPNGMKHEDLDMTEAFATTVRRKQDLCMIP 437
            + Q CVKET+RL+P   +++P  C E CQ+ G+ IP    V VNA AIGRDPKDW +P  F PERFLD  I+Y G  F+FIPFG+GRRICPG    +  + L LA L++ F W+LP+G+ +E LDM E F  ++   + L +IP
Sbjct:  340 YLQACVKETMRLYPPISIMIPHRCMETCQVMGYTIPKGMDVHVNAHAIGRDPKDWKDPLKFQPERFLDSDIEYNGKQFQFIPFGSGRRICPGRPLAVRIIPLVLASLVHAFGWELPDGVPNEKLDMEELFTLSLCMAKPLRVIP 483          
BLAST of CF835215 vs. ExPASy Swiss-Prot
Match: C71A6_NEPRA (Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa GN=CYP71A6 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.256e-37
Identity = 72/147 (48.98%), Postives = 101/147 (68.71%), Query Frame = 3
Query:    6 FFQLCVKETLRLHPVAPLLLPRECGERCQINGFDIPVKAKVFVNAWAIGRDPKDWTEPASFIPERFLDHSIDYKGTNFEFIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWKLPNGMKHEDLDMTEAFATTVRRKQDLCMIPIPY 446
            + +  +KE+LRLH   PLL+PRE     ++ G+D+    +V +N WAIGRD   W E  +F+PERFL+ SIDY+G +FE IPFG+GRR CPG +F  A  EL LA L++ FD+KLPNG++ EDLDM+E    T+ +K  L ++P P+
Sbjct:  361 YLKAVMKESLRLHAPVPLLVPRESTRDTKVLGYDVASGTRVLINCWAIGRDSSVWEESETFLPERFLETSIDYRGMHFELIPFGSGRRGCPGATFAAAIDELALATLVHKFDFKLPNGVRVEDLDMSEGSGFTIHKKFPLLVVPTPH 507          
BLAST of CF835215 vs. ExPASy Swiss-Prot
Match: C76C3_ARATH (Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CYP76C3 PE=2 SV=2)

HSP 1 Score: 155.606 bits (392), Expect = 2.142e-37
Identity = 74/145 (51.03%), Postives = 95/145 (65.52%), Query Frame = 3
Query:    6 FFQLCVKETLRLHPVAPLLLPRECGERCQINGFDIPVKAKVFVNAWAIGRDPKDWTEPASFIPERFLDHSIDYKGTNFEFIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWKLPNGMKHEDLDMTEAFATTVRRKQDLCMIPI 440
            + Q  VKETLRLHP APL+ PR+     QI GF +P   +V VN WAIGRD   W  P  F PERFL    D KG +FE IPFG+GRR+CPG+S  L ++ + LA LLY FDWKL NG+   ++DM+E F  T+ + + LC +P+
Sbjct:  363 YLQAIVKETLRLHPAAPLI-PRKSESDVQIMGFLVPKNTQVVVNVWAIGRDASVWENPMKFEPERFLLRETDVKGRDFELIPFGSGRRMCPGISMALKTMHMVLASLLYSFDWKLQNGVVPGNIDMSETFGLTLHKAKSLCAVPV 506          
BLAST of CF835215 vs. ExPASy Swiss-Prot
Match: C76C1_ARATH (Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CYP76C1 PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.798e-37
Identity = 73/145 (50.34%), Postives = 91/145 (62.76%), Query Frame = 3
Query:    6 FFQLCVKETLRLHPVAPLLLPRECGERCQINGFDIPVKAKVFVNAWAIGRDPKDWTEPASFIPERFLDHSIDYKGTNFEFIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWKLPNGMKHEDLDMTEAFATTVRRKQDLCMIPI 440
            + Q  VKET RLH   PLL+PR+     +I GF +    +V VN WAIGRDP  W  P+ F PERFL   +D +G ++E  PFGAGRRICPGM   + +V L LA LLY FDWKLP G+  EDLDM E F  T+ +   L  +P+
Sbjct:  361 YLQAVVKETFRLHTPVPLLIPRKAESDAEILGFMVLKDTQVLVNVWAIGRDPSVWDNPSQFEPERFLGKDMDVRGRDYELTPFGAGRRICPGMPLAMKTVSLMLASLLYSFDWKLPKGVLSEDLDMDETFGLTLHKTNPLHAVPV 505          
BLAST of CF835215 vs. ExPASy Swiss-Prot
Match: C84A1_ARATH (Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CYP84A1 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 4.772e-37
Identity = 74/145 (51.03%), Postives = 101/145 (69.66%), Query Frame = 3
Query:    6 FFQLCVKETLRLHPVAPLLLPRECGERCQINGFDIPVKAKVFVNAWAIGRDPKDWTEPASFIPERFLDHSI-DYKGTNFEFIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWKLPNGMKHEDLDMTEAFATTVRRKQDLCMIP 437
            + +  +KETLR+HP  PLLL  E  E   I+GF IP K++V +NA+AIGRDP  WT+P +F P RFL+  + D+KG+NFEFIPFG+GRR CPGM  GL +++L +A +L+ F WKLP+GMK  +LDM + F  T  +   L  +P
Sbjct:  369 YLKCTLKETLRMHPPIPLLL-HETAEDTSIDGFFIPKKSRVMINAFAIGRDPTSWTDPDTFRPSRFLEPGVPDFKGSNFEFIPFGSGRRSCPGMQLGLYALDLAVAHILHCFTWKLPDGMKPSELDMNDVFGLTAPKATRLFAVP 512          
BLAST of CF835215 vs. ExPASy Swiss-Prot
Match: C80B1_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (Fragment) OS=Eschscholzia californica GN=CYP80B1 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 4.772e-37
Identity = 70/144 (48.61%), Postives = 95/144 (65.97%), Query Frame = 3
Query:    6 FFQLCVKETLRLHPVAPLLLPRECGERCQINGFDIPVKAKVFVNAWAIGRDPKDWTEPASFIPERFLDHSIDYKGTNFEFIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWKLPNGMKHEDLDMTEAFATTVRRKQDLCMIP 437
            + +  VKETLRLHP  PLLLPR   E C I  + IP   ++ VNAW IGRDPK WT+P +F PERFL+ S+D++G +F  IPFGAGRRICPG+      + L +A  + + DW LPNGM  + L + E F  T++++  L ++P
Sbjct:  340 YLEATVKETLRLHPPTPLLLPRRALETCTILNYTIPKDCQIMVNAWGIGRDPKTWTDPLTFSPERFLNSSVDFRGNDFSLIPFGAGRRICPGLPIANQFIALLVATFVQNLDWCLPNGMSVDHLIVEEKFGLTLQKEPPLFIVP 483          
BLAST of CF835215 vs. ExPASy Swiss-Prot
Match: C76B1_HELTU (7-ethoxycoumarin O-deethylase OS=Helianthus tuberosus GN=CYP76B1 PE=1 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 8.140e-37
Identity = 70/146 (47.95%), Postives = 97/146 (66.44%), Query Frame = 3
Query:    6 FFQLCVKETLRLHPVAPLLLPRECGERCQINGFDIPVKAKVFVNAWAIGRDPKDWTEPASFIPERFLDHSIDYKGTNFEFIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWKLPNGMKHEDLDMTEAFATTVRRKQDLCMIPIP 443
            +    VKE LRLHP +PLLLPR+   + +++G+ IP    VFVNAWAIGRDP  W +   F P+RFL+  +D +G +F+ IPFGAGRRICPG+      V + L  LL +FDWK+   + ++ LDMTE   TT+ + + LC++PIP
Sbjct:  343 YLSCIVKEVLRLHPPSPLLLPRKVVTQVELSGYTIPAGTLVFVNAWAIGRDPTVWDDSLEFKPQRFLESRLDVRGHDFDLIPFGAGRRICPGIPLATRMVPIMLGSLLNNFDWKIDTKVPYDVLDMTEKNGTTISKAKPLCVVPIP 488          
The following BLAST results are available for this feature:
BLAST of CF835215 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 277
Match NameE-valueIdentityDescription
C83A1_ARATH1.483e-3851.03Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CY... [more]
C71BS_ARATH1.483e-3862.93Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=C... [more]
C71B1_THLAR1.937e-3848.97Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1... [more]
C80A1_BERST7.362e-3850.00Berbamunine synthase OS=Berberis stolonifera GN=CY... [more]
C71A6_NEPRA1.256e-3748.98Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa... [more]
C76C3_ARATH2.142e-3751.03Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CY... [more]
C76C1_ARATH2.798e-3750.34Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CY... [more]
C84A1_ARATH4.772e-3751.03Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CY... [more]
C80B1_ESCCA4.772e-3748.61(S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (F... [more]
C76B1_HELTU8.140e-3747.957-ethoxycoumarin O-deethylase OS=Helianthus tubero... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06N17_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06N17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835215 ID=CF835215; Name=CF835215; organism=Citrus sinensis; type=EST; length=669bp
TGAAATTTTTCCAATTATGTGTTAAAGAGACTTTGAGATTACATCCTGTT
GCCCCGTTGCTACTTCCAAGAGAATGTGGAGAGAGATGTCAAATTAATGG
ATTTGACATTCCTGTGAAAGCTAAAGTTTTTGTTAATGCATGGGCGATTG
GAAGAGATCCCAAGGACTGGACTGAACCTGCGAGCTTTATTCCAGAGAGG
TTCCTCGATCATTCTATTGACTACAAGGGTACTAATTTTGAATTCATACC
ATTTGGAGCTGGTAGGAGGATATGCCCTGGAATGTCATTTGGTCTGGCCA
GCGTGGAACTTCCACTGGCGATGCTATTATACCATTTTGACTGGAAACTA
CCAAATGGTATGAAGCATGAAGATTTGGACATGACCGAGGCCTTTGCCAC
GACAGTAAGAAGAAAACAAGATTTGTGCATGATTCCTATTCCTTACCATC
CTTCATCTGTTGCATAAGAACTAAAGGAAAATTTTATTATTATTCTTATT
AGTATTTGTTATCAACTGTCTCTGAAACTCTTTTTGTTTTTGTAGACCTT
TGCTGGTTCCTGAGATTTAAATTCATGGTGTACACTTTTGTTTCTCTCTG
TCTTACTCTCTCCNTAAGTTTTACTTTTTTTTTGGATAAAATAAACAGCT
AATATTTTCATGATTGGAA
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