CF835215

Overview
NameCF835215
Unique NameCF835215
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length669
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835215 vs. ExPASy Swiss-Prot
Match: C98A1_SORBI (Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 4.467e-35
Identity = 64/129 (49.61%), Postives = 87/129 (67.44%), Query Frame = 3
Query:    6 FFQLCVKETLRLHPVAPLLLPRECGERCQINGFDIPVKAKVFVNAWAIGRDPKDWTEPASFIPERFLDHSIDYKGTNFEFIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWKLPNGMKHEDLDMTEA 392
            + Q  VKE+LRLHP  PL+LP +     +I G+DIP  A V VN WA+ RDPK W+ P  + PERFL+ +ID KG++F  +PFGAGRR+CPG   G+  V   +  LL+HF+W LP G + ED++M E+
Sbjct:  352 YLQAVVKESLRLHPPTPLMLPHKASTNVKIGGYDIPKGANVMVNVWAVARDPKVWSNPLEYRPERFLEENIDIKGSDFRVLPFGAGRRVCPGAQLGINLVASMIGHLLHHFEWSLPEGTRPEDVNMMES 480          
BLAST of CF835215 vs. ExPASy Swiss-Prot
Match: C71C2_MAIZE (Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 9.951e-35
Identity = 68/148 (45.95%), Postives = 97/148 (65.54%), Query Frame = 3
Query:    6 FFQLCVKETLRLHPVAPLLLPRECGERCQINGFDIPVKAKVFVNAWAIGRDPKDWTEPASFIPERFLDH----SIDYKGTNFEFIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWKLPNGMKHEDLDMTEAFATTVRRKQDLCMIP 437
            + +  +KETLRLHP AP LLP       +I+G+ +P   +V V+AWA+GRD   W +P  F+PERF+       +  KG +  FIPFG+GRRICPGM+FG A++E+ LA L+YHFDW++P       + M E+F  T+RRK+ L ++P
Sbjct:  387 YLKATIKETLRLHPPAPFLLPHYSTADSEIDGYFVPAGTRVLVHAWALGRDRTTWEKPEEFMPERFVQEPGAVDVHMKGKDLRFIPFGSGRRICPGMNFGFATMEVMLANLMYHFDWEVPG--SGAGVSMEESFGLTLRRKEKLLLVP 532          
BLAST of CF835215 vs. ExPASy Swiss-Prot
Match: C71B6_ARATH (Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CYP71B6 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 9.951e-35
Identity = 69/145 (47.59%), Postives = 97/145 (66.90%), Query Frame = 3
Query:    6 FFQLCVKETLRLHPVAPLLLPRECGERCQINGFDIPVKAKVFVNAWAIGRDPKDWTEPASFIPERFLDHSIDYKGTNFEFIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWKLPNGMKHEDLDMTEAFATTVRRKQDLCMIPI 440
            + ++ +KET RLH  +P+L+PRE     +I G+DI    ++ VNAWAIGR+P  W +P  FIPERF+D +++ KGT+FE +PFG+GRR CP M  GL++VE  LA LLYHFDWK       E++ + EA   T  RK  L ++P+
Sbjct:  357 YMKMVIKETWRLHAPSPILIPREAMTNFKIKGYDIYPGTRIHVNAWAIGRNPDVWKDPDEFIPERFVDSNVETKGTSFELLPFGSGRRGCPAMYVGLSTVEYTLANLLYHFDWKAT-----EEVSVEEAPGLTSHRKHPLHLVPV 496          
BLAST of CF835215 vs. ExPASy Swiss-Prot
Match: C83B1_ARATH (Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CYP83B1 PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.697e-34
Identity = 69/147 (46.94%), Postives = 95/147 (64.63%), Query Frame = 3
Query:    6 FFQLCVKETLRLHPVAPLLLPRECGERCQINGFDIPVKAKVFVNAWAIGRDPKDWTE-PASFIPERFLDH--SIDYKGTNFEFIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWKLPNGMKHEDLDMTEAFATTVRRKQDLCMIP 437
            + +  +KE+LRL PV P+LL RE     +I G+DIP K  + VNAWA+ RD   W + P  FIPERF++    +D+KG +FE +PFG+GRR+CP M  G+A VE+P A LLY FDW LP G+K ED+ M       + +K+ L + P
Sbjct:  349 YLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPERFMNEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTGLAMHKKEHLVLAP 495          
BLAST of CF835215 vs. ExPASy Swiss-Prot
Match: C71A8_MENPI (Cytochrome P450 71A8 OS=Mentha piperita GN=CYP71A8 PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.697e-34
Identity = 67/136 (49.26%), Postives = 92/136 (67.65%), Query Frame = 3
Query:    6 FFQLCVKETLRLHPVAPLLLPRECGERCQINGFDIPVKAKVFVNAWAIGRDPKDWTEPASFIPERFLDHSIDYKGTNFEFIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWKLPNGMKHEDLDMTEAFATTVRR 413
            + +  +KET+R H   PLL+PR      ++ G+D+PV   V +NAWAIGRDP  W EP  F PERFL+ S+D+KG +FE IPFGAGRR CPG +F +A++E  LA L+  FDW+LP+  +  +LDM+E     +RR
Sbjct:  358 YLKAVMKETMRFHTPIPLLVPRVARNDVEVMGYDVPVGTMVMINAWAIGRDPTSWDEPEKFRPERFLNSSVDFKGLDFELIPFGAGRRGCPGTTFPMATLEFTLANLMQKFDWELPHECR--ELDMSERPGVAIRR 491          
BLAST of CF835215 vs. ExPASy Swiss-Prot
Match: F3PH_PETHY (Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=CYP75B2 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 4.938e-34
Identity = 70/150 (46.67%), Postives = 94/150 (62.67%), Query Frame = 3
Query:    6 FFQLCVKETLRLHPVAPLLLPRECGERCQINGFDIPVKAKVFVNAWAIGRDPKDWTEPASFIPERFL----DHSIDYKGTNFEFIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWKLPNGMKHEDLDMTEAFATTVRRKQDLCMIPIP 443
            + +  VKET RLHP  PL LPR   E C+ING+ IP  + + +N WAI RDP  W +P  F PERFL       +D +G +FE IPFGAGRRIC GM+ G+  V+L +A L++ F+W L +G   E L+M EA+  T++R   L + P P
Sbjct:  354 YLEAIVKETFRLHPSTPLSLPRIASESCEINGYFIPKGSTLLLNVWAIARDPNAWADPLEFRPERFLPGGEKPKVDVRGNDFEVIPFGAGRRICAGMNLGIRMVQLMIATLIHAFNWDLVSGQLPEMLNMEEAYGLTLQRADPLVVHPRP 503          
BLAST of CF835215 vs. ExPASy Swiss-Prot
Match: F3PH_ARATH (Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana GN=CYP75B1 PE=1 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 8.424e-34
Identity = 68/150 (45.33%), Postives = 93/150 (62.00%), Query Frame = 3
Query:    6 FFQLCVKETLRLHPVAPLLLPRECGERCQINGFDIPVKAKVFVNAWAIGRDPKDWTEPASFIPERFL----DHSIDYKGTNFEFIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWKLPNGMKHEDLDMTEAFATTVRRKQDLCMIPIP 443
            + Q  +KE  RLHP  PL LP    E C+ING+ IP  + +  N WAI RDP  W++P +F PERFL       +D KG++FE IPFGAGRRIC G+S GL +++   A L+  FDW+L  G+  E L+M E++  T++R   L + P P
Sbjct:  352 YLQAVIKENFRLHPPTPLSLPHIASESCEINGYHIPKGSTLLTNIWAIARDPDQWSDPLAFKPERFLPGGEKSGVDVKGSDFELIPFGAGRRICAGLSLGLRTIQFLTATLVQGFDWELAGGVTPEKLNMEESYGLTLQRAVPLVVHPKP 501          
BLAST of CF835215 vs. ExPASy Swiss-Prot
Match: C76A2_SOLME (Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76A2 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.877e-33
Identity = 65/144 (45.14%), Postives = 92/144 (63.89%), Query Frame = 3
Query:    6 FFQLCVKETLRLHPVAPLLLPRECGERCQINGFDIPVKAKVFVNAWAIGRDPKDWTEPASFIPERFLDHSIDYKGTNFEFIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWKLPNGMKHEDLDMTEAFATTVRRKQDLCMIP 437
            + Q  +KE+LRLHP  P L+PRE  +  +  G+D+P   +V VNAWAIGRDP+ W +P SF PERFL   ID KG ++  IPFGAGRR+C G+  G   +   L  LL  F+W+LP+G+  + ++M  +   T R++  L +IP
Sbjct:  359 YMQAVLKESLRLHPPLPFLIPRETIQDTKFMGYDVPKDTQVLVNAWAIGRDPECWDDPMSFKPERFLGSKIDVKGQHYGLIPFGAGRRMCVGLPLGHRMMHFALGSLLREFEWELPDGVSPKSINMDGSMGVTARKRDSLKVIP 502          
BLAST of CF835215 vs. ExPASy Swiss-Prot
Match: C71AE_ARATH (Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=CYP71A14 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.451e-33
Identity = 69/148 (46.62%), Postives = 94/148 (63.51%), Query Frame = 3
Query:    3 KFFQLCVKETLRLHPVAPLLLPRECGERCQINGFDIPVKAKVFVNAWAIGRDPKDW-TEPASFIPERFLDHSIDYKGTNFEFIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWKLPNGMKHEDLDMTEAFATTVRRKQDLCMIPIP 443
            K+ +  VKE LRLHP  PLL+PRE  E  ++ G+DI    +V +NAWAI RD   W  +   F PER LD  +D++GTNFEFIPFG+GRRICPG+ F +A VE+ LA L+  F+W++      ++ D+ E+    V RK  L + P P
Sbjct:  349 KYLKAVVKEVLRLHPPLPLLVPRELSEDIKLKGYDIAAGTQVIINAWAIQRDTMTWGIDAEEFRPERHLDSLVDFRGTNFEFIPFGSGRRICPGIGFAMALVEVTLANLVNRFNWRMEVQHSGDEYDLAESTGLDVCRKFPLIVFPSP 496          
BLAST of CF835215 vs. ExPASy Swiss-Prot
Match: C98A3_ARATH (Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CYP98A3 PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 4.622e-32
Identity = 64/152 (42.11%), Postives = 87/152 (57.24%), Query Frame = 3
Query:    6 FFQLCVKETLRLHPVAPLLLPRECGERCQINGFDIPVKAKVFVNAWAIGRDPKDWTEPASFIPERFLDHSIDYKGTNFEFIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWKLPNGMKHEDLDMTEAFATTVRRKQDLCMIPIPYHPSSV 461
            + Q  VKE+ RLHP  PL+LP       +I G+DIP  + V VN WA+ RDP  W  P  F PERFL+  +D KG +F  +PFGAGRR+CPG   G+  V   ++ LL+HF W  P G K E++DM+E        +  +  +  P  PS +
Sbjct:  349 YLQCVVKESFRLHPPTPLMLPHRSNADVKIGGYDIPKGSNVHVNVWAVARDPAVWKNPFEFRPERFLEEDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMMSHLLHHFVWTPPQGTKPEEIDMSENPGLVTYMRTPVQAVATPRLPSDL 500          
The following BLAST results are available for this feature:
BLAST of CF835215 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 277
Match NameE-valueIdentityDescription
C98A1_SORBI4.467e-3549.61Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1... [more]
C71C2_MAIZE9.951e-3545.95Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 S... [more]
C71B6_ARATH9.951e-3547.59Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CY... [more]
C83B1_ARATH1.697e-3446.94Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CY... [more]
C71A8_MENPI1.697e-3449.26Cytochrome P450 71A8 OS=Mentha piperita GN=CYP71A8... [more]
F3PH_PETHY4.938e-3446.67Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=C... [more]
F3PH_ARATH8.424e-3445.33Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana... [more]
C76A2_SOLME1.877e-3345.14Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76... [more]
C71AE_ARATH2.451e-3346.62Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=C... [more]
C98A3_ARATH4.622e-3242.11Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CY... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_06N17_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06N17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835215 ID=CF835215; Name=CF835215; organism=Citrus sinensis; type=EST; length=669bp
TGAAATTTTTCCAATTATGTGTTAAAGAGACTTTGAGATTACATCCTGTT
GCCCCGTTGCTACTTCCAAGAGAATGTGGAGAGAGATGTCAAATTAATGG
ATTTGACATTCCTGTGAAAGCTAAAGTTTTTGTTAATGCATGGGCGATTG
GAAGAGATCCCAAGGACTGGACTGAACCTGCGAGCTTTATTCCAGAGAGG
TTCCTCGATCATTCTATTGACTACAAGGGTACTAATTTTGAATTCATACC
ATTTGGAGCTGGTAGGAGGATATGCCCTGGAATGTCATTTGGTCTGGCCA
GCGTGGAACTTCCACTGGCGATGCTATTATACCATTTTGACTGGAAACTA
CCAAATGGTATGAAGCATGAAGATTTGGACATGACCGAGGCCTTTGCCAC
GACAGTAAGAAGAAAACAAGATTTGTGCATGATTCCTATTCCTTACCATC
CTTCATCTGTTGCATAAGAACTAAAGGAAAATTTTATTATTATTCTTATT
AGTATTTGTTATCAACTGTCTCTGAAACTCTTTTTGTTTTTGTAGACCTT
TGCTGGTTCCTGAGATTTAAATTCATGGTGTACACTTTTGTTTCTCTCTG
TCTTACTCTCTCCNTAAGTTTTACTTTTTTTTTGGATAAAATAAACAGCT
AATATTTTCATGATTGGAA
back to top