CF835223

Overview
NameCF835223
Unique NameCF835223
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9501 contig Csv1_Contig9501:56..758. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835223 vs. ExPASy Swiss-Prot
Match: MOCOS_DROVI (Molybdenum cofactor sulfurase OS=Drosophila virilis GN=mal PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.314e-11
Identity = 58/233 (24.89%), Postives = 107/233 (45.92%), Query Frame = 2
Query:   23 RKMEAAAKVKSIFVYPIKSCRGISVSQQA---PLTPTGFRWDRQWMVINNNGRAYTQRNEPKLALVETELPNEAF-LEGWEPTGRSF-MVIRAPGMQALKISLSKPRDIADGVSVWEWCGSALAEGAEASNWFTNYLG-KPSRLVRYNAESETRPVDPKYAAGEKIMFSDCYPFMLLSQGSLDALNKLLKEPIPINRFRPNILVDGCEPFSEDLWMGIRINNCTFQGVKLCDR 703
            R      ++  + +YP+KSC    + + A   PLT  G ++DR+WM+++ NG A TQ+    L LV+  +  +   L        SF  V  +  +QA   +  + +     +  ++ CG       E + W +  LG +  RL+R +A+          +  +++   +   F+L+++ S+ +L         ++RFR NI++D   PF E  +  +RI +  FQ    C R
Sbjct:  501 RAQRLRPRLLQLAIYPVKSCAAFKIERDAVCWPLTHQGLQYDREWMIVDINGMALTQKRCTDLCLVQPRVVRDQLELHFCGANSESFCSVPLSLSVQAANSARCRSKVCRQPIEGYD-CGD------EVATWLSQQLGLEGLRLLRQSAQRSA-----PGSQQQQLSLVNQAQFLLVNRASVRSLQFEEALDETVDRFRANIVIDTGMPFEELAYAQLRIGDVLFQVDGPCQR 721          
BLAST of CF835223 vs. ExPASy Swiss-Prot
Match: MOCOS_BOMMO (Molybdenum cofactor sulfurase OS=Bombyx mori GN=mal PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.241e-11
Identity = 52/236 (22.03%), Postives = 108/236 (45.76%), Query Frame = 2
Query:   47 VKSIFVYPIKSCRGISVSQQAPLTPTGFRWDRQWMVINNNGRAYTQRNEPKLALVETELPNEAFLEGWEPTGRSFMVIRAPGMQALKISLSKPRDIADGVSVWEWCGSALAE--------GAEASNWFTNYLGKP-SRLVRYNAESETRPVDPKYAAGEKIM-FSDCYPFMLLSQGSLDALNKLLKEPI-------PINRFRPNILVDGCEPFSEDLWMGIRINNCTFQGVKLCDR 703
            +K I ++PIKSC    +     + P GF +DR+WM++ +NG   TQ+   ++ ++  ++  +          +  M++  PG   + I L     I +       C S +          G E ++W +  L     RL+R  + ++ R +  K    +K++  S+   ++L+++ ++  L++ +K+P+         +RFR N++++  +   E  W  + I N  F+    C R
Sbjct:  534 LKEICIFPIKSCGAFKILSGWNIGPKGFEYDREWMIVKDNGVCLTQKQNTRMCMIRPQIDLK----------QKVMILNFPGKTPISIPLE--NSINEVQKNGSLCHSKVCTDMIKGIDCGDEVADWISEALEVSFLRLIR-QSSNDNRSLKKKKDEDKKLLSLSNQAQYLLINKATVKWLSEKIKDPLFTDDLNHLTDRFRGNLIIEMEQELLEREWHSVIIGNHEFKVEGQCPR 756          
BLAST of CF835223 vs. ExPASy Swiss-Prot
Match: MOCOS_ASPNC (Molybdenum cofactor sulfurase OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=hxB PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.241e-11
Identity = 70/281 (24.91%), Postives = 118/281 (41.99%), Query Frame = 2
Query:   47 VKSIFVYPIKSCRGISV--SQQAPLTPTGFRWDRQWMVIN-NNGRAYTQRNEPKLALVETELPNEAFLEGWEPTGR-SFMVIRAPGMQALKISLSKPRDIADGVSVWE-------WCGSALAEGA----EASNWFTNYLGKPSRLVRYNAESETRPVDPKYAAGEK-------------------------IMFSDCYPFMLLSQGSLDALNKLL------------KEPIPINRFRPNIL--------VDGCEPFSEDLWMGIRI--NNCTFQGVKLCDR 703
            V+S+ VYPIKSC    V   ++  +   G  WDR+W +I+   G A  Q+  P++AL+        F++      R +   IR+P  + L+I L +        S+ +        CG  +   A      S +F+++LG P  L R+  +S TR  +P+   G +                         I+ S+  P +L+S+ S++ LN+ +            K+ +  + FR NI+        V    P+ ED W  +RI  +N  F  +  C R
Sbjct:  483 VESLSVYPIKSCGAFKVPDGKRWEIRREGLVWDREWCLIHQGTGTALNQKRYPRMALI------RPFIDLSHGVLRVTCGSIRSPSQKTLEIPLDRENSNLTTTSLCQNSSKPSTVCGDQVIVQAYSSPTVSAFFSDFLGVPCTLARFPPQSSTRLAEPRRGLGSRKSPLRPAMPGAFPQDTPTPEAERNPILLSNESPILLISRSSVNRLNETIKSSPTTTNSTGRKKAVAADVFRANIVVAEDFPQPVSAGRPYIEDHWESLRIGPDNLHFNVLGSCQR 757          
BLAST of CF835223 vs. ExPASy Swiss-Prot
Match: MOCOS_DROYA (Molybdenum cofactor sulfurase OS=Drosophila yakuba GN=mal PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.823e-11
Identity = 59/228 (25.88%), Postives = 103/228 (45.18%), Query Frame = 2
Query:   44 KVKSIFVYPIKSCRGISVSQQA--PLTPTGFRWDRQWMVINNNGRAYTQRNEPKLALVETELPNEAFLEGWEPTGRSFMV---IRAPGMQALKISLSKPRDIADGVSVWEWCGSALAEGAEASNWFTNYLG-KPSRLVRYNAESETRPVDPKYAAGEKIMFSDCYPFMLLSQGSLDALNKLLKEPI--PINRFRPNILVDGCEPFSEDLWMGIRINNCTFQGVKLCDR 703
            K+  + +YP+KSC    +  +   PLT  G R+DR+WM+++ NG A TQ+   +L L+   +  +  LE        F V   +      + K      R   +G+     CG  +A+      W +  LG +  RL+R + +  +          +K+   +   F+LL++ S+ +L    +EP+   ++RFR NI++D    F E  +  + I    FQ    C R
Sbjct:  512 KLLQMAIYPVKSCAAFKIELEGSWPLTDQGLRYDREWMIVDMNGMALTQKRCTELCLIRPVIKVDQ-LELQFGDNSHFSVPLSLEDQAADSAKCVSKVCRQPVEGLD----CGDGVAQ------WLSENLGLEGLRLLRQSGQRNSSKDQ------QKLSLVNQAQFLLLNKSSVRSLQ--FEEPLDETVDRFRANIIIDTGSAFEELTYKALSIGGIQFQVEGPCQR 720          
BLAST of CF835223 vs. ExPASy Swiss-Prot
Match: MOCOS_DROER (Molybdenum cofactor sulfurase OS=Drosophila erecta GN=mal PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.823e-11
Identity = 59/228 (25.88%), Postives = 103/228 (45.18%), Query Frame = 2
Query:   44 KVKSIFVYPIKSCRGISVSQQA--PLTPTGFRWDRQWMVINNNGRAYTQRNEPKLALVETELPNEAFLEGWEPTGRSFMV---IRAPGMQALKISLSKPRDIADGVSVWEWCGSALAEGAEASNWFTNYLG-KPSRLVRYNAESETRPVDPKYAAGEKIMFSDCYPFMLLSQGSLDALNKLLKEPI--PINRFRPNILVDGCEPFSEDLWMGIRINNCTFQGVKLCDR 703
            K+  + +YP+KSC    +      PLT  G ++DR+WM+++ NG A TQ+   +L L+   +  +  LE        F V   +      + K      R   +G+     CG A+A+      W +  LG +  RL+R + +  +          +K+   +   F+LL++ S+ +L    +EP+   ++RFR NI++D    F E  +  + I    FQ    C R
Sbjct:  512 KLLQMAIYPVKSCAAFKIESPGSWPLTDQGLKYDREWMIVDMNGMALTQKRCTELCLIRPVIKVDQ-LELQFGDNSHFSVPLSLEDQAADSAKCVSKVCRQPVEGLD----CGDAVAQ------WLSENLGLEGLRLLRQSGQRNSSKDQ------QKLSLVNQAQFLLLNRSSVRSLQ--FEEPLDETVDRFRANIIIDTGSAFEELTYKALSIGGIQFQVEGPCQR 720          
The following BLAST results are available for this feature:
BLAST of CF835223 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
MOCOS_DROVI1.314e-1124.89Molybdenum cofactor sulfurase OS=Drosophila virili... [more]
MOCOS_BOMMO2.241e-1122.03Molybdenum cofactor sulfurase OS=Bombyx mori GN=ma... [more]
MOCOS_ASPNC2.241e-1124.91Molybdenum cofactor sulfurase OS=Aspergillus niger... [more]
MOCOS_DROYA3.823e-1125.88Molybdenum cofactor sulfurase OS=Drosophila yakuba... [more]
MOCOS_DROER3.823e-1125.88Molybdenum cofactor sulfurase OS=Drosophila erecta... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_06N23_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06N23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835223 ID=CF835223; Name=CF835223; organism=Citrus sinensis; type=EST; length=703bp
GGAAAACAGTGCGTTTCTACTGAGAAAAATGGAGGCTGCAGCCAAAGTAA
AATCAATATTTGTATACCCAATTAAATCATGCAGAGGCATCTCTGTCTCT
CAGCAGGCACCCCTCACTCCTACTGGATTTCGATGGGATAGACAGTGGAT
GGTAATTAATAACAACGGGAGAGCATATACTCAGAGAAACGAGCCAAAGC
TTGCTCTGGTTGAGACAGAGTTGCCAAATGAGGCATTTTTAGAAGGATGG
GAACCCACTGGGAGATCATTCATGGTAATAAGAGCTCCAGGGATGCAGGC
TCTTAAAATTTCACTGAGCAAACCCCGTGATATAGCAGACGGTGTTTCCG
TATGGGAGTGGTGTGGCTCTGCACTGGCTGAGGGAGCTGAAGCTTCAAAT
TGGTTTACAAATTACCTTGGGAAACCTAGTCGGCTAGTTCGTTACAATGC
AGAATCAGAAACTAGACCTGTCGATCCCAAATATGCTGCTGGAGAGAAAA
TAATGTTTTCTGATTGTTATCCATTTATGCTGTTGTCTCAGGGATCTTTG
GATGCACTTAATAAGCTTCTCAAGGAGCCTATTCCAATTAACCGTTTTCG
ACCAAACATCCTTGTTGATGGTTGTGAACCGTTTTCTGAGGACTTATGGA
TGGGCATCCGAATAAACAATTGCACATTTCAAGGTGTTAAGCTGTGTGAC
CGC
back to top