CF835230

Overview
NameCF835230
Unique NameCF835230
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length620
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig802 contig Csv1_Contig802:906..1524. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835230 vs. ExPASy Swiss-Prot
Match: COMT1_OCIBA (Caffeic acid 3-O-methyltransferase 1 OS=Ocimum basilicum GN=COMT1 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 8.938e-24
Identity = 48/93 (51.61%), Postives = 63/93 (67.74%), Query Frame = -3
Query:  340 WDDEHCLKLLKNCYKSVPEDGKVIVVELMLPEVPNTSIESKSNSHIDVLMMTQNPGGKERTKHEFTPLATGAGFSGIRSDLVTGNFWVMEFYK 618
            W DEHC+K LKNCY ++P++GKVI+ E +LPE P+T + +K+  HIDV+M+  NPGGKERT+ EF  LA  AGF          N W+ME  K
Sbjct:  269 WSDEHCVKFLKNCYDALPQNGKVILAECVLPEAPDTGLATKNVVHIDVIMLAHNPGGKERTEKEFQGLAKAAGFKQFNKACCAYNTWIMELLK 361          
BLAST of CF835230 vs. ExPASy Swiss-Prot
Match: COMT1_PRUDU (Caffeic acid 3-O-methyltransferase OS=Prunus dulcis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.167e-23
Identity = 50/93 (53.76%), Postives = 65/93 (69.89%), Query Frame = -3
Query:  340 WDDEHCLKLLKNCYKSVPEDGKVIVVELMLPEVPNTSIESKSNSHIDVLMMTQNPGGKERTKHEFTPLATGAGFSGIRSDLVTGNFWVMEFYK 618
            W DEHCLK LKNCY ++P++GKVI+ E +LP  P++S+ +K   HIDV+M+  NPGGKERT+ EF  LA GAGF G        N +V+EF K
Sbjct:  271 WSDEHCLKFLKNCYAALPDNGKVILGECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTEQEFQALAKGAGFQGFNVACSAFNTYVIEFLK 363          
BLAST of CF835230 vs. ExPASy Swiss-Prot
Match: COMT1_POPTM (Caffeic acid 3-O-methyltransferase 1 OS=Populus tremuloides GN=OMT1 PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.167e-23
Identity = 51/93 (54.84%), Postives = 64/93 (68.82%), Query Frame = -3
Query:  340 WDDEHCLKLLKNCYKSVPEDGKVIVVELMLPEVPNTSIESKSNSHIDVLMMTQNPGGKERTKHEFTPLATGAGFSGIRSDLVTGNFWVMEFYK 618
            W D HCLK LKNCY ++PE+GKVI+VE +LP  P+TS+ +K   H+DV+M+  NPGGKERT+ EF  LA GAGF G        N  V+EF K
Sbjct:  271 WSDAHCLKFLKNCYDALPENGKVILVECILPVAPDTSLATKGVVHVDVIMLAHNPGGKERTEKEFEGLAKGAGFQGFEVMCCAFNTHVIEFRK 363          
BLAST of CF835230 vs. ExPASy Swiss-Prot
Match: COMT1_CAPCH (Caffeic acid 3-O-methyltransferase OS=Capsicum chinense GN=COMT PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.167e-23
Identity = 49/93 (52.69%), Postives = 65/93 (69.89%), Query Frame = -3
Query:  340 WDDEHCLKLLKNCYKSVPEDGKVIVVELMLPEVPNTSIESKSNSHIDVLMMTQNPGGKERTKHEFTPLATGAGFSGIRSDLVTGNFWVMEFYK 618
            W D+HC+KLLKNCY+++P +GKVI+VE +LPE P+TS  +KS  H D++M+  NPGGKERT+ +F  LA    FS  R      + WVMEF K
Sbjct:  267 WSDDHCIKLLKNCYEALPANGKVIIVECILPEAPDTSAATKSKVHGDIIMLAHNPGGKERTEKDFEALANWGWFSRFRKVCCAYHTWVMEFNK 359          
BLAST of CF835230 vs. ExPASy Swiss-Prot
Match: OMT2_CHRAE (Quercetin 3-O-methyltransferase 2 OS=Chrysosplenium americanum GN=OMT2 PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.525e-23
Identity = 50/93 (53.76%), Postives = 66/93 (70.97%), Query Frame = -3
Query:  340 WDDEHCLKLLKNCYKSVPEDGKVIVVELMLPEVPNTSIESKSNSHIDVLMMTQNPGGKERTKHEFTPLATGAGFSGIRSDLVTGNFWVMEFYK 618
            W DEHCLKLLKNCY ++P +GKVI+ E +LPEVP++S+ +K   HIDV+ +  NPGGKERT+ EF  LA  AGF G +      N +++EF K
Sbjct:  247 WSDEHCLKLLKNCYDALPNNGKVILAECILPEVPDSSLATKGVVHIDVITVAHNPGGKERTEKEFEALAKAAGFQGFQVFCNAFNTYIIEFSK 339          
BLAST of CF835230 vs. ExPASy Swiss-Prot
Match: OMT1_CHRAE (Quercetin 3-O-methyltransferase 1 OS=Chrysosplenium americanum GN=OMT1 PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.525e-23
Identity = 50/93 (53.76%), Postives = 66/93 (70.97%), Query Frame = -3
Query:  340 WDDEHCLKLLKNCYKSVPEDGKVIVVELMLPEVPNTSIESKSNSHIDVLMMTQNPGGKERTKHEFTPLATGAGFSGIRSDLVTGNFWVMEFYK 618
            W DEHCLKLLKNCY ++P +GKVI+ E +LPEVP++S+ +K   HIDV+ +  NPGGKERT+ EF  LA  AGF G +      N +++EF K
Sbjct:  247 WSDEHCLKLLKNCYDALPNNGKVILAECILPEVPDSSLATKGVVHIDVITVAHNPGGKERTEKEFEALAKAAGFQGFQVFCNAFNTYIIEFSK 339          
BLAST of CF835230 vs. ExPASy Swiss-Prot
Match: OMT1_ARATH (Quercetin 3-O-methyltransferase 1 OS=Arabidopsis thaliana GN=OMT1 PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 4.436e-23
Identity = 45/78 (57.69%), Postives = 60/78 (76.92%), Query Frame = -3
Query:  385 WDDEHCLKLLKNCYKSVPEDGKVIVVELMLPEVPNTSIESKSNSHIDVLMMTQNPGGKERTKHEFTPLATGAGFSGIR 618
            W DEHC+K LKNCY+S+PEDGKVI+ E +LPE P++S+ +K   H+D +M+  NPGGKERT+ EF  LA  +GF GI+
Sbjct:  269 WSDEHCVKFLKNCYESLPEDGKVILAECILPETPDSSLSTKQVVHVDCIMLAHNPGGKERTEKEFEALAKASGFKGIK 346          
BLAST of CF835230 vs. ExPASy Swiss-Prot
Match: OMT1_ORYSJ (Quercetin 3-O-methyltransferase 1 OS=Oryza sativa subsp. japonica GN=ROMT-9 PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 9.882e-23
Identity = 45/93 (48.39%), Postives = 63/93 (67.74%), Query Frame = -3
Query:  340 WDDEHCLKLLKNCYKSVPEDGKVIVVELMLPEVPNTSIESKSNSHIDVLMMTQNPGGKERTKHEFTPLATGAGFSGIRSDLVTGNFWVMEFYK 618
            W DEHC +LLKNCY ++PE GKV+VVE +LPE  + +   +   H+D++M+  NPGGKER + EF  LA  AGF+G ++  +  N W +EF K
Sbjct:  276 WSDEHCARLLKNCYDALPEHGKVVVVECVLPESSDATAREQGVFHVDMIMLAHNPGGKERYEREFRELARAAGFTGFKATYIYANAWAIEFTK 368          
BLAST of CF835230 vs. ExPASy Swiss-Prot
Match: IEMT_CLABR ((Iso)eugenol O-methyltransferase OS=Clarkia breweri GN=IEMT1 PE=1 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 9.882e-23
Identity = 51/93 (54.84%), Postives = 62/93 (66.67%), Query Frame = -3
Query:  340 WDDEHCLKLLKNCYKSVPEDGKVIVVELMLPEVPNTSIESKSNSHIDVLMMTQNPGGKERTKHEFTPLATGAGFSGIRSDLVTGNFWVMEFYK 618
            W DEHCLKLLKNCY ++P+ GKVIV E +LP  P+ SI +K   H D LM+  NPGGKERT+ EF  LA  +GF G +      N +VMEF K
Sbjct:  274 WSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQALAMASGFRGFKVASCAFNTYVMEFLK 366          
BLAST of CF835230 vs. ExPASy Swiss-Prot
Match: COMT2_OCIBA (Caffeic acid 3-O-methyltransferase 2 OS=Ocimum basilicum GN=COMT2 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.686e-22
Identity = 46/93 (49.46%), Postives = 62/93 (66.67%), Query Frame = -3
Query:  340 WDDEHCLKLLKNCYKSVPEDGKVIVVELMLPEVPNTSIESKSNSHIDVLMMTQNPGGKERTKHEFTPLATGAGFSGIRSDLVTGNFWVMEFYK 618
            W D HC+K LK CY+++PE+GKVI+ E +LPE P+T + +K+  HIDV+M+  NPGGKERT+ EF  LA  +GF          N W+ME  K
Sbjct:  269 WSDAHCVKFLKKCYEALPENGKVILAECVLPEAPDTGLATKNVVHIDVIMLAHNPGGKERTEKEFQVLAKASGFKQFNKVCCAYNSWIMELLK 361          
The following BLAST results are available for this feature:
BLAST of CF835230 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
COMT1_OCIBA8.938e-2451.61Caffeic acid 3-O-methyltransferase 1 OS=Ocimum bas... [more]
COMT1_PRUDU1.167e-2353.76Caffeic acid 3-O-methyltransferase OS=Prunus dulci... [more]
COMT1_POPTM1.167e-2354.84Caffeic acid 3-O-methyltransferase 1 OS=Populus tr... [more]
COMT1_CAPCH1.167e-2352.69Caffeic acid 3-O-methyltransferase OS=Capsicum chi... [more]
OMT2_CHRAE1.525e-2353.76Quercetin 3-O-methyltransferase 2 OS=Chrysospleniu... [more]
OMT1_CHRAE1.525e-2353.76Quercetin 3-O-methyltransferase 1 OS=Chrysospleniu... [more]
OMT1_ARATH4.436e-2357.69Quercetin 3-O-methyltransferase 1 OS=Arabidopsis t... [more]
OMT1_ORYSJ9.882e-2348.39Quercetin 3-O-methyltransferase 1 OS=Oryza sativa ... [more]
IEMT_CLABR9.882e-2354.84(Iso)eugenol O-methyltransferase OS=Clarkia brewer... [more]
COMT2_OCIBA1.686e-2249.46Caffeic acid 3-O-methyltransferase 2 OS=Ocimum bas... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06O03_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06O03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835230 ID=CF835230; Name=CF835230; organism=Citrus sinensis; type=EST; length=620bp
TTTTTTTTTTTTTTAGGAAATAATTTGTCTGCATCCTTTATTCAACCTTT
TAAAGGCATTTTATAAGAGCCAATTGAAAACATATGATCTACAGTATTAA
CTACATTAAGAACAAAAAAAGACACTCTAGAAAATAACACATGAAATACG
AGAAATAAAAGGAAATATGGGCAATATAGCACAGGTAGTTAATAGACGAC
GGCTCAAGCACCCATTTATTTCAAAGAAACTTATTACTAAGTCGTAGACT
CCTCTTCTCAAGCATGGCTATGGTACATTGGAAGCTTGTTAAATGCATGG
CTTGTTGCTCGTCTCTAGGATGCATGGGCAAGCACTCTACTTATAGAACT
CCATAACCCAGAAATTACCAGTAACAAGATCAGATCTGATCCCACTAAAA
CCAGCGCCAGTAGCCAGGGGCGTGAATTCATGCTTTGTTCTCTCCTTTCC
ACCGGGATTTTGAGTCATCATAAGCACGTCAATATGGGAATTTGATTTTG
ATTCAATGCTTGTATTAGGAACTTCTGGAAGCATTAACTCCACAACGATT
ACCTTTCCATCTTCTGGAACGCTTTTGTAGCAATTCTTCAACAACTTCAA
GCAATGTTCATCGTCCCAAT
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