CF835232

Overview
NameCF835232
Unique NameCF835232
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length582
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1050 contig Csv1_Contig1050:411..992. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF835232 vs. ExPASy Swiss-Prot
Match: FET3_KLULA (Iron transport multicopper oxidase FET3 OS=Kluyveromyces lactis GN=FET3 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.612e-11
Identity = 47/145 (32.41%), Postives = 65/145 (44.83%), Query Frame = -3 
Query:  149 DVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGR--------GEGK--FTKEDEXXXXXXXXXXXNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQAL 553
            D + P V    T     ++L  +  ++++L N      N +  HP+HLHGH F ++ R        GEG   F  ED             T  + P     LRF ADNPG W FHCHIE H   G+ ++L    E + N  +Q L
Sbjct:  384 DALNPLVYGTNT---NAFVLKKDEIIEIVLNN------NDTGKHPFHLHGHIFQLVDRERGYDDAIGEGPHPFDPEDHNPFPDYPMMRD-TVYVNPQSSIVLRFKADNPGVWFFHCHIEWHLKQGLALLLIEAPEEMQNTESQQL 518
The following BLAST results are available for this feature:
BLAST of CF835232 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
FET3_KLULA2.612e-1132.41Iron transport multicopper oxidase FET3 OS=Kluyver... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06O04_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06O04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835232 ID=CF835232; Name=CF835232; organism=Citrus sinensis; type=EST; length=582bp
TTTTTTTTTTTTTTTATTCACTCCGAAATTTTATTAATATAAATCCCTTT
ACAACAATAGAAACTCCAGGAATAAAGTACATAAAACCATCTAGCTAGCC
TCAATTTTGTTTAGGGTTCATGAACCTTTTCCCAGTCAAACCACAAGCCA
ACGCCTGGTTTGGAATATTACCAACGGTTTCAACACCAAGAGCAAGAACC
ACACCCATTCCAATATGGAAATGGGGCTCAATATGGCAGTGAAATGCCCA
AGCACCTGGATTATCAGCAACAAATCTTAAAGCAGTCCAGCCATATGGGA
ATATCACCGCAGTATTTTTCAATGGTGGATTCTTCAAGTTAAATTTCTTC
TCATCTTCTTTCGTAAACTTCCCTTCTCCGCGCCCTAATACCCAAAAATC
ATGCCCATGCAAATGCCAAGGGTGGGTTTCACTCAAGTTTGGCCTTATCG
CGTTTGCATTTTGAAGTATAACATCAACTGTGGTGTTTAAACCAAGCATG
TAAACCCCACTTCCAAGAGTTGTATTAGCGTTTACAGGAGGTTTCATCAC
GTCATACTCATTCCAGAAGTTTTCGGGGGGAC
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