CF835244

Overview
NameCF835244
Unique NameCF835244
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length686
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835244 vs. ExPASy Swiss-Prot
Match: CETN2_BOVIN (Centrin-2 OS=Bos taurus GN=CETN2 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 9.826e-33
Identity = 65/133 (48.87%), Postives = 95/133 (71.43%), Query Frame = -2
Query:  284 KEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 682
            +EAF LFD DG G I  KEL   MR+LG  P + E++ MI+E+D +G G ++F +FL +M +KM + D++EE+ +AF++FD D+ G IS   L+ V   LGE L+DEE+ EMI EAD DGDG++N +EF+++M
Sbjct:   34 REAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFSDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLSDEELQEMIDEADRDGDGEVNEQEFLRIM 166          
BLAST of CF835244 vs. ExPASy Swiss-Prot
Match: CETN1_BOVIN (Centrin-1 OS=Bos taurus GN=CETN1 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 9.826e-33
Identity = 68/133 (51.13%), Postives = 93/133 (69.92%), Query Frame = -2
Query:  284 KEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 682
            +EAF LFD DG G I  KEL   MR+LG  P + E++ MI +VD +G G I F +FL +M +KM + D++EE+ +AFR+FD D+ G IS   L+ V   LGE LTDEE+ EMI EAD DGDG++N +EF+++M
Sbjct:   34 REAFDLFDADGSGTIDVKELKVAMRALGFEPRKEEMKRMIADVDKEGTGKISFNDFLAVMTQKMAEKDTKEEILKAFRLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVNEDEFLRIM 166          
BLAST of CF835244 vs. ExPASy Swiss-Prot
Match: CETN2_HUMAN (Centrin-2 OS=Homo sapiens GN=CETN2 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.676e-32
Identity = 65/133 (48.87%), Postives = 95/133 (71.43%), Query Frame = -2
Query:  284 KEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 682
            +EAF LFD DG G I  KEL   MR+LG  P + E++ MI+E+D +G G ++F +FL +M +KM + D++EE+ +AF++FD D+ G IS   L+ V   LGE LTDEE+ EMI EAD DGDG+++ +EF+++M
Sbjct:   34 REAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIM 166          
BLAST of CF835244 vs. ExPASy Swiss-Prot
Match: CML8_ORYSJ (Probable calcium-binding protein CML8 OS=Oryza sativa subsp. japonica GN=CML8 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 4.877e-32
Identity = 67/133 (50.38%), Postives = 91/133 (68.42%), Query Frame = -2
Query:  284 KEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 682
            KEAF LFD DG G I  KEL   MR+LG   T  ++  MI EVD DG+GTIDF EF+++M  KM + D+ EEL +AF++ DKD NG IS  +++ +    GE  T +EV EMI  AD +GDG++++EEF+K+M
Sbjct:   49 KEAFDLFDTDGSGTIDPKELNVAMRALGFEMTPEQIHQMIAEVDKDGSGTIDFDEFVHMMTDKMGERDAREELNKAFKIIDKDNNGKISDVDIQRLAIETGEPFTLDEVREMIEAADENGDGEVDHEEFLKMM 181          
BLAST of CF835244 vs. ExPASy Swiss-Prot
Match: CML14_ARATH (Probable calcium-binding protein CML14 OS=Arabidopsis thaliana GN=CML14 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 4.877e-32
Identity = 67/136 (49.26%), Postives = 95/136 (69.85%), Query Frame = -2
Query:  275 KEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 682
            KEAF LFD DGDG I   ELG +MRSLG NPTE++L+ +I   +   +   DF  FL+LMA+ +K    + +L++AF+V DK+  GF++ A+LRH++T++GEKL   E DE I+E DV  DG+I YE+F+  M+AK
Sbjct:   15 KEAFMLFDTDGDGKIAPSELGILMRSLGGNPTESQLKSIITTENL--SSPFDFNRFLDLMAKHLKTEPFDRQLRDAFKVLDKEGTGFVAVADLRHILTSIGEKLQPSEFDEWIKEVDVGSDGKIRYEDFIARMVAK 148          
BLAST of CF835244 vs. ExPASy Swiss-Prot
Match: CML13_ARATH (Probable calcium-binding protein CML13 OS=Arabidopsis thaliana GN=CML13 PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 6.369e-32
Identity = 67/136 (49.26%), Postives = 95/136 (69.85%), Query Frame = -2
Query:  275 KEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 682
            KEAF LFD DGDG I   ELG +MRSLG NPT+A+L+ +I   +   +   DF  FL+LMA+ +K    + +L++AF+V DK+  GF++ A+LRH++T++GEKL   E DE I+E DV  DG+I YE+F+  M+AK
Sbjct:   15 KEAFMLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIIASENL--SSPFDFNRFLDLMAKHLKTEPFDRQLRDAFKVLDKEGTGFVAVADLRHILTSIGEKLEPNEFDEWIKEVDVGSDGKIRYEDFIARMVAK 148          
BLAST of CF835244 vs. ExPASy Swiss-Prot
Match: CML20_ARATH (Probable calcium-binding protein CML20 OS=Arabidopsis thaliana GN=CML20 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 8.318e-32
Identity = 64/133 (48.12%), Postives = 93/133 (69.92%), Query Frame = -2
Query:  284 KEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 682
            KEAF LFD DG G I  KEL   MR+LG   TE ++  MI +VD DG+G IDF EF+++M  K+ + D++EEL +AF++ D D+NG IS  +++ +  +LGE  TD E+ EM+ EAD D DG++N +EF+++M
Sbjct:   29 KEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINKMIADVDKDGSGAIDFDEFVHMMTAKIGERDTKEELTKAFQIIDLDKNGKISPDDIKRMAKDLGENFTDAEIREMVEEADRDRDGEVNMDEFMRMM 161          

HSP 2 Score: 69.707 bits (169), Expect = 1.631e-11
Identity = 32/70 (45.71%), Postives = 49/70 (70.00%), Query Frame = -2
Query:  275 TDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 484
            T  ++E+KEAF +FD D +G I A EL   M  LG ++T+E++++MI + D DG G I+++EFV +M AK
Sbjct:   22 TQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINKMIADVDKDGSGAIDFDEFVHMMTAK 91          
BLAST of CF835244 vs. ExPASy Swiss-Prot
Match: CATR_ATRNU (Caltractin OS=Atriplex nummularia PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.086e-31
Identity = 64/133 (48.12%), Postives = 91/133 (68.42%), Query Frame = -2
Query:  284 KEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 682
            KEAF LFD DG G I  KEL   MR+LG   TE ++  MI +VD DG+G IDF EF ++M  K+ + D++EEL +AFR+ D+D NG IS  +++ +   LGE  T +++ +MI EAD D DG++N EEF+++M
Sbjct:   28 KEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDFDEFCHMMTAKIGERDTKEELMKAFRIIDQDNNGKISPEDIQRIAKELGENFTVKDIQDMIEEADRDRDGEVNVEEFLRMM 160          
BLAST of CF835244 vs. ExPASy Swiss-Prot
Match: CML9_ARATH (Calmodulin-like protein 9 OS=Arabidopsis thaliana GN=CML9 PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.419e-31
Identity = 67/136 (49.26%), Postives = 94/136 (69.12%), Query Frame = -2
Query:  278 FKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 685
            F EAF L DKD DG IT ++L  VM+S+G+NP   +LQ M+++VD  GNG I F +FL +MA+      + +EL E FRVFD+D +G IS  EL   M ++G K+T EE + M+READ+DGDG +++ EF K+M+A
Sbjct:   13 FYEAFCLIDKDSDGFITKEKLTKVMKSMGKNPKAEQLQQMMSDVDIFGNGGITFDDFLYIMAQNTSQESASDELIEVFRVFDRDGDGLISQLELGEGMKDMGMKITAEEAEHMVREADLDGDGFLSFHEFSKMMIA 148          
BLAST of CF835244 vs. ExPASy Swiss-Prot
Match: CML7_ORYSJ (Probable calcium-binding protein CML7 OS=Oryza sativa subsp. japonica GN=CML7 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.419e-31
Identity = 68/136 (50.00%), Postives = 93/136 (68.38%), Query Frame = -2
Query:  275 KEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 682
            +EAFSLFD DGDG I   ELG +MRSLG NPT+A+L+D+  +         DFP FL+LM   ++    +  L++AFRV DKD +G +S A+LRHV+T++GEKL   E DE IRE DV  DG I Y++F++ ++AK
Sbjct:   15 REAFSLFDTDGDGRIAPSELGVLMRSLGGNPTQAQLRDIAAQEKL--TAPFDFPRFLDLMRAHLRPEPFDRPLRDAFRVLDKDASGTVSVADLRHVLTSIGEKLEPHEFDEWIREVDVAPDGTIRYDDFIRRIVAK 148          
The following BLAST results are available for this feature:
BLAST of CF835244 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 471
Match NameE-valueIdentityDescription
CETN2_BOVIN9.826e-3348.87Centrin-2 OS=Bos taurus GN=CETN2 PE=2 SV=1[more]
CETN1_BOVIN9.826e-3351.13Centrin-1 OS=Bos taurus GN=CETN1 PE=2 SV=1[more]
CETN2_HUMAN1.676e-3248.87Centrin-2 OS=Homo sapiens GN=CETN2 PE=1 SV=1[more]
CML8_ORYSJ4.877e-3250.38Probable calcium-binding protein CML8 OS=Oryza sat... [more]
CML14_ARATH4.877e-3249.26Probable calcium-binding protein CML14 OS=Arabidop... [more]
CML13_ARATH6.369e-3249.26Probable calcium-binding protein CML13 OS=Arabidop... [more]
CML20_ARATH8.318e-3248.12Probable calcium-binding protein CML20 OS=Arabidop... [more]
CATR_ATRNU1.086e-3148.12Caltractin OS=Atriplex nummularia PE=2 SV=1[more]
CML9_ARATH1.419e-3149.26Calmodulin-like protein 9 OS=Arabidopsis thaliana ... [more]
CML7_ORYSJ1.419e-3150.00Probable calcium-binding protein CML7 OS=Oryza sat... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06O12_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06O12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835244 ID=CF835244; Name=CF835244; organism=Citrus sinensis; type=EST; length=686bp
TTTTTTTTTTTTTTTTTAGAAATAGGGCAGATCAACGAGTCACTCTTTTA
ACAGAAACAATGTTCACAGAAGAGCGGAAAAAAACTAAAACATTAAAAAA
CTGAAAAGTTGCTCCAGTCACAAGACAAATTGAAGCAGGAGACAACATGC
TTCCTTTAGCTTGACCTCAGAGTTATCAAATTAAAATTTATAAAAAAGGA
AACTAGGGAACCAATTATATTAATCAACCAATTTCTTCTTTTCCCAGGAA
GTTTTGGTTGGGTGGAGTCACTTACTTAGCCATCATAACCTTGACAAATT
CCTCGTAATTTATCTGGCCATCACCATCGACATCAGCTTCCCTTATCATC
TCATCGACTTCCTCATCAGTAAGCTTCTCCCCTAGGTTTGTCATCACATG
GCGCAGCTCAGCAGCTGAGATGAAACCATTCTGATCCTTGTCGAAAACCC
GGAAGGCCTCTTTCAGCTCCTCCTCAGAGTCGGTATCCTTCATCTTCCTG
GCCATGAGGTTTAGGAATTCAGGAAAATCAATAGTTCCATTACCATCAGC
ATCCACTTCATTGATCATGTCCTGGAGCTCAGCCTCAGTGGGGTTCTGAC
CCAGTGACCTCATAACAGTGCCAAGCTCCTTGGTGGTAATGCAACCGTCG
CCGTCCTTGTCGAACAAGCTGAAGGCTTCTTTGAAC
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