CF835257

Overview
NameCF835257
Unique NameCF835257
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length660
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11430 contig Csv1_Contig11430:233..892. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C71BX_ARATH (Cytochrome P450 71B36 OS=Arabidopsis thaliana GN=CYP71B36 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.472e-22
Identity = 56/173 (32.37%), Postives = 95/173 (54.91%), Query Frame = 3
Query:  114 LLINCILWLVFTLVWVMALSFVSRGRHKQLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDVGQ 632
            L ++CIL   FT           R +H++ PP P  +P+IGNL +LG  PH+SL +L+K +G +M L+ G + TVVVSS   AK +L+ HDL  C R  P         ++   +A+ P    WK LR+I    +F+ +++ + Q ++  ++K L+  V ++   G  +++ +
Sbjct:   10 LFLSCILLAAFT--------HKKRQQHQRKPPSPPGFPIIGNLHQLGELPHQSLWRLSKKYGHVMLLKFGSIPTVVVSSSETAKQVLKIHDLHCCSR--PSLAGPRALSYNYLDIAFSPFDDYWKELRRICVQELFSVKRVQSFQPIKEDEVKKLIDSVSESASQGTPVNLSE 172          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C71BV_ARATH (Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=CYP71B34 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 5.508e-22
Identity = 56/173 (32.37%), Postives = 100/173 (57.80%), Query Frame = 3
Query:  147 TLVWVMALSFV-----------SRGRHKQLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDVGQ 632
            T +W+++L FV           +R  +++ PP P   P+IGNL +LG  PH+SL KL+K +GP+M L+LG+V TV+VSS   AK  L+ HDL  C R  P    +    ++   +A+ P    WK +RK++   +F+S+++ + Q ++ +++K L+  + ++      I++ +
Sbjct:    2 TNIWLLSLIFVICILVAVFNHKNRRNYQRTPPSPPGCPIIGNLHQLGELPHQSLWKLSKKYGPVMLLKLGRVPTVIVSSSETAKQALKIHDLHCCSR--PGFAGARELSYNYLDIAFSPYDDYWKEVRKLAVQELFSSKQVHSIQPIKDEEVKKLIDSISESAAQKTPINLNK 172          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: F3PH_ARATH (Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana GN=CYP75B1 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.193e-22
Identity = 57/174 (32.76%), Postives = 101/174 (58.05%), Query Frame = 3
Query:  114 LLINCILWLVFTLVWVMALSFVSRGRHKQLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAG-KAIDVGQ 632
            L +  +L  V  L+  +     +R  + +LPPGP P+P+IGNL  +G KPH++L+ +   +GPI+ LRLG V  VV +S S+A+  L+ HD +F  R        + + + +  L + P    W+ LRKIS++H+F+++ L+  + +R++++  L     +  R G K +++GQ
Sbjct:    4 LFLTILLATVLFLILRIFSHRRNRSHNNRLPPGPNPWPIIGNLPHMGTKPHRTLSAMVTTYGPILHLRLGFVDVVVAASKSVAEQFLKIHDANFASRPPNSGAKHMAYNYQD--LVFAPYGHRWRLLRKISSVHLFSAKALEDFKHVRQEEVGTL---TRELVRVGTKPVNLGQ 172          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C71BA_ARATH (Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=CYP71B10 PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 9.394e-22
Identity = 54/180 (30.00%), Postives = 102/180 (56.67%), Query Frame = 3
Query:  129 ILWLVFTLVWVMALSFV---SRGRHKQLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDVGQAAFNTSLNL 659
            +LW V  ++ +  L      S+ R  + PP P   P+IGNL +LG  PH+SL KL+K +GP+M L+LG+V TV+VS+P  AK +L+++DL  C R   E    L + +    +A+      WK LRK+    +F ++++++ Q ++  +++ L+  + ++      +++     + ++N+
Sbjct:    3 VLWFVSLILLISILLVAVKHSKRRWVRQPPSPPGLPIIGNLHQLGELPHQSLCKLSKKYGPVMLLKLGRVPTVIVSTPETAKQVLKDYDLHCCSRPSLEGTRKLSYNY--LDIAFSRFDDYWKELRKLCVEELFCNKRINSIQPIKEAEMEKLIDSIAESASQKTLVNLSDTFLSLNVNV 180          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C76A2_SOLME (Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76A2 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.227e-21
Identity = 49/157 (31.21%), Postives = 93/157 (59.24%), Query Frame = 3
Query:  198 QLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVE---DNCRAGKAIDVGQAAFNTSLNL 659
            + PPGP   P+ GN+ ELG +P+K +A L + +GP++ L+LG   T+VV +   ++ + +NHD+SF +R++P+  ++    +++ SLA  P    W+  R+I  + +F  +K+   + +RRK + ++L  +E   ++   G  I+V +  F  S N+
Sbjct:   34 KFPPGPPGLPIFGNMFELGTEPYKKMAVLRQKYGPVLWLKLGSTYTMVVQTAQASEELFKNHDISFANRVIPD--VNQAHSYYQGSLAIAPYGPFWRFQRRICTIEMFVHKKISETEPVRRKCVDNMLKWIEKEANSAEKGSGIEVTRFVFLASFNM 188          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C71BD_ARATH (Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=CYP71B13 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.602e-21
Identity = 53/178 (29.78%), Postives = 102/178 (57.30%), Query Frame = 3
Query:  132 LWLVFTLVWVMALSFVSRGRHK---QLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLP--FPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDVGQAAFNTS 650
            LW +  +    A  F+++   K    LPPGP   P+IGNL +LG+KPH+S+ KL++ +GP++ L+LG+V +VV S+P   K +L+  D   C R    A L+ P    ++   LA+ P S  WK +RK++ + ++T++++ + + +R +++   +  ++ +    + +++ Q     S
Sbjct:    3 LWYIIVVFVFFASIFIAKNTRKTKKNLPPGPPRLPIIGNLHQLGSKPHRSMFKLSEKYGPLVYLKLGKVPSVVASTPETVKDVLKTFDKDCCSR----AFLTYPARISYNLKDLAFAPYSKYWKAVRKMTVVELYTAKRVKSFRNIREEEVASFVEFIKHSASLEEIVNLNQTLVKLS 176          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C75A2_SOLME (Flavonoid 3',5'-hydroxylase OS=Solanum melongena GN=CYP75A2 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.733e-21
Identity = 56/165 (33.94%), Postives = 95/165 (57.58%), Query Frame = 3
Query:  138 LVFTLVWVMALSFVSRG--RHKQLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDV 626
            +++ +V+++    ++ G  R ++LPPGP  +PVIG L  LG  PH +LAK+AK +GPIM L++G    VV S+P+ AKA L+  D++F +R  P    +    ++   + + P    WK LRK+SN+H+   + L+    +R  ++  +L  + D    G+ I V
Sbjct:   13 IIYIIVYIIIQKLIATGSWRRRRLPPGPEGWPVIGALPLLGGMPHVALAKMAKKYGPIMYLKVGTCGMVVASTPNAAKAFLKTLDINFSNR--PPNAGATHMAYNAQDMVFAPYGPRWKLLRKLSNLHMLGGKALENWANVRANELGHMLKSMFDASHVGERIVV 175          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C75A1_PINTA (Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.570e-21
Identity = 55/176 (31.25%), Postives = 103/176 (58.52%), Query Frame = 3
Query:  135 WLVFTLVWVMALSFVSRGRHKQLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGK-AIDVGQAAFNTSLNL 659
            ++ F   W++  S     R+++LPPGP P+P+IGN  ++    H++L  LA+ +GPI+ LR G V TVVVSS   AK  L+ HDL F  R  P   +   F ++   +A+ P    W+ +RKI  + + TS+++++ + +R++++  ++  + +   +G+ A++V +A   +  N+
Sbjct:   24 FIFFFSCWILHQS----QRNERLPPGPYPWPIIGNFHQVRLPLHRTLKNLAEKYGPILFLRFGSVPTVVVSSSEKAKHFLKTHDLIFASR--PPTSVGKYFFYNFKDIAFSPYGDHWRKMRKICVLELLTSKRIESFKHVRQEELSAMIHSIWEESESGRIAVNVSKAISTSLANI 193          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C71B9_ARATH (Cytochrome P450 71B9 OS=Arabidopsis thaliana GN=CYP71B9 PE=2 SV=3)

HSP 1 Score: 101.293 bits (251), Expect = 4.662e-21
Identity = 52/180 (28.89%), Postives = 100/180 (55.56%), Query Frame = 3
Query:  153 VWVMALSFV-----------SRGRHKQLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDVGQAAFNTSLNL 659
            +W ++L F+            R  ++Q PP P  +P+IGNL +LG  PH+SL  L+K +GP+M L+LG V TVVVSS   AK +L+ +DL  C R  P    +    ++   +A+ P    WK LR+I    +F+++++ + Q ++ ++++ L+    ++      +++ +   + ++++
Sbjct:    4 IWFLSLLFLCCILLAAFKHKKRRTNQQQPPSPPGFPIIGNLHQLGELPHQSLWSLSKTYGPVMLLKLGSVPTVVVSSSETAKQVLKINDLHCCSR--PSLAGAKELSYNYLDIAFSPFDDYWKELRRICVQELFSAKRVHSIQPIKEEEVRKLIVSATESASQKSPVNLSEKFLDLTVSV 181          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C71B1_THLAR (Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 4.662e-21
Identity = 52/176 (29.55%), Postives = 98/176 (55.68%), Query Frame = 3
Query:  129 ILWLVFTLVWVMALSFVSRGRH--KQLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDVGQAAFNTS 650
            +L++V  LV   +L      R   K LPPGP   P+IGNL +LG KPH+++ +L+K +GP+MSL+LG VTTVV +S    + +L+ +DL  C R  P         ++   L + P    W+ +RK++ + ++T++++ + + +R +++   +   +    + + +++ Q     S
Sbjct:    3 LLYIVAALVIFASLLIAKSKRKPKKNLPPGPPRLPIIGNLHQLGEKPHRAMVELSKTYGPLMSLKLGSVTTVVATSVETVRDVLKTYDLECCSR--PYMTYPARITYNLKDLVFSPYDKYWRQVRKLTVVELYTAKRVQSFRHIREEEVASFVRFNKQAASSEETVNLSQKILKMS 176          
The following BLAST results are available for this feature:
BLAST of CF835257 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 124
Match NameE-valueIdentityDescription
C71BX_ARATH2.472e-2232.37Cytochrome P450 71B36 OS=Arabidopsis thaliana GN=C... [more]
C71BV_ARATH5.508e-2232.37Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=C... [more]
F3PH_ARATH7.193e-2232.76Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana... [more]
C71BA_ARATH9.394e-2230.00Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=C... [more]
C76A2_SOLME1.227e-2131.21Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76... [more]
C71BD_ARATH1.602e-2129.78Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=C... [more]
C75A2_SOLME2.733e-2133.94Flavonoid 3',5'-hydroxylase OS=Solanum melongena G... [more]
C75A1_PINTA3.570e-2131.25Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 P... [more]
C71B9_ARATH4.662e-2128.89Cytochrome P450 71B9 OS=Arabidopsis thaliana GN=CY... [more]
C71B1_THLAR4.662e-2129.55Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06O20_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06O20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835257 ID=CF835257; Name=CF835257; organism=Citrus sinensis; type=EST; length=660bp
TTTTTTGGGTATCCATAAGAAGCACATGTAAACCAATGCGTGAAAAAACC
TATGTATAGATACGGGGTTACAGTGTGCTAAACCAAAATATCAACTTCAA
TTCAAAGATGGATTTGTTAATTAACTGCATACTGTGGCTTGTATTCACAT
TGGTTTGGGTGATGGCTTTAAGTTTCGTTTCCAGAGGACGACACAAACAG
CTTCCACCGGGACCGAGGCCTTATCCAGTGATCGGAAACCTTCTGGAGCT
AGGTGCTAAACCTCACAAGTCACTGGCCAAGCTTGCCAAGATTCATGGGC
CCATAATGAGTCTAAGACTTGGCCAGGTGACCACAGTAGTGGTTTCTTCT
CCAAGCATGGCCAAAGCCATCCTTCAAAATCATGATTTATCATTCTGTGA
TCGAATGGTCCCTGAAGCAATCTTGTCACTGCCCTTCCCGCACCATGAAT
TCAGTTTGGCCTGGCTTCCAGTTTCAACAATGTGGAAAAATCTTCGAAAA
ATAAGCAACATGCATATTTTCACTAGTCAGAAACTCGATGCCAATCAAGA
GCTCCGGCGCAAGAAAATCAAAGACCTTCTTGCTCATGTTGAAGACAATT
GCCGTGCGGGTAAAGCAATAGATGTTGGCCAAGCTGCTTTCAATACTTCA
CTTAATTTAT
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