CF835257

Overview
NameCF835257
Unique NameCF835257
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length660
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11430 contig Csv1_Contig11430:233..892. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C71AJ_ARATH (Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=CYP71A19 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.319e-12
Identity = 44/175 (25.14%), Postives = 91/175 (52.00%), Query Frame = 3
Query:  114 LLINCILWLVFTLVWVMALSFVSRGRHKQLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVED--NCRAGKAIDVGQ 632
            +L+   L  +  L+ + ++   +   +  LPP P   PVIGNL +L    H+SL  L+  +GP+M L  G+   ++VSS  +A  IL+ +D+   +R   + I  +     +  +A+ P    WK ++ I   ++ +++ + + +++R  +IK ++  VE+  +C     +++ Q
Sbjct:    4 ILVTLCLTTLLALLLLKSILKRTTTNNLNLPPSPWRLPVIGNLHQLSLNTHRSLRSLSLRYGPLMLLHFGRTPVLIVSSADVAHDILKTYDVICANRPKTKVIDKILRGGRD--VAFAPYGEYWKQMKSICIQNLLSNKMVRSYKKIREDEIKLMIEKVENASSCSPPSPVNLSQ 176          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C71AF_ARATH (Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=CYP71A15 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.319e-12
Identity = 39/131 (29.77%), Postives = 71/131 (54.20%), Query Frame = 3
Query:  201 LPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVE 593
            LPP P   PVIGNL +L   PH+SL  L+  +GP+M L  G+V  +VVSS  +A  +++ HDL   +R   + I ++     E  + + P    W+ ++ +  +H+   + + +  ++R ++   ++  VE
Sbjct:   32 LPPSPWRVPVIGNLHQLSLHPHRSLRSLSHRYGPLMLLHFGRVPILVVSSSDVAHDLMKTHDLKVANRPRLKVIETILNGGRE--VVFSPYGDYWRQIKTVCVVHLLNKKMVQSFAKVREEERSVMMEKVE 160          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: TCMO_ARATH (Trans-cinnamate 4-monooxygenase OS=Arabidopsis thaliana GN=CYP73A5 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.029e-12
Identity = 46/147 (31.29%), Postives = 73/147 (49.66%), Query Frame = 3
Query:  114 LLINCILWLVFTLVWVMALSFVSRGRHKQLPPGPRPYPVIGNLLELGAK-PHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQE 551
            LL+   L  VF  V +  +    RG+  +LPPGP P P+ GN L++G    H++L   AK  G +  LR+GQ   VVVSSP + K +L    + F  R     ++   F      + +      W+ +R+I  +  FT++ +  N+E
Sbjct:    4 LLLEKSLIAVFVAVILATVISKLRGKKLKLPPGPIPIPIFGNWLQVGDDLNHRNLVDYAKKFGDLFLLRMGQRNLVVVSSPDLTKEVLLTQGVEFGSR--TRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQNRE 148          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C76A1_SOLME (Cytochrome P450 76A1 (Fragment) OS=Solanum melongena GN=CYP76A1 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.029e-12
Identity = 41/148 (27.70%), Postives = 84/148 (56.76%), Query Frame = 3
Query:  234 GNLLEL-GAKPHKSLAKLAKIHGPIMSLRLG-QVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRA----GKAIDVGQAAFNTSLNL 659
            GN+ +L G+ P+K +A L + +GPI+ L++G  + T+V+ + + A  + +NHD+SF DR  P   ++L   +++ S+A  P    W+  R+I  + +F  ++++    +R++ +  +L   E+   +    G+ I+V +  F  S N+
Sbjct:    2 GNMFDLAGSAPYKKIACLKEKYGPILWLKIGSSMNTMVIQTANSASELFRNHDVSFSDR--PIVDVNLAHNYYKGSMALAPYGNYWRFSRRICTVEMFVHKRINETTNIRQESVDKMLRLDEEKASSSGGGGEGIEVTRYMFLASFNM 147          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: TCMO_RUTGR (Trans-cinnamate 4-monooxygenase OS=Ruta graveolens GN=CYP73A2 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.956e-12
Identity = 50/144 (34.72%), Postives = 77/144 (53.47%), Query Frame = 3
Query:  108 MDLLI--NCILWLVFTLVWVMALSFVSRGRHKQLPPGPRPYPVIGNLLELGAKPH-KSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQ 530
            MDLL+    +L L    V  +A+S + RG+  +LPPGP  +PV GN L++G   + + LA L+K  G +  LR+GQ   VVVSSP MAK +L    + F  R     ++   F      + +   S  W+ +R+I  +  FT++
Sbjct:    1 MDLLLLEKALLGLFAAAVVAIAVSKL-RGKRFKLPPGPLGFPVFGNWLQVGDDLNQRKLANLSKKFGDVYLLRMGQRNLVVVSSPEMAKEVLHTQGVEFGSR--TRNVVFDIFTGKGQDMVFTVYSEHWRKMRRIMTVPFFTNK 141          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: TCMO_CATRO (Trans-cinnamate 4-monooxygenase OS=Catharanthus roseus GN=CYP73A4 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.956e-12
Identity = 46/140 (32.86%), Postives = 72/140 (51.43%), Query Frame = 3
Query:  114 LLINCILWLVFTLVWVMALSFVSRGRHKQLPPGPRPYPVIGNLLELGAK-PHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQ 530
            LL+   L  +F  + V ++    RG+  +LPPGP P PV GN L++G    H++L+  AK  G I  LR+GQ   VVVSSP +AK +L    + F  R     ++   F      + +      W+ +R+I  +  FT++
Sbjct:    4 LLLEKTLLGLFAAIIVASIVSKLRGKKFKLPPGPIPVPVFGNWLQVGDDLNHRNLSDYAKKFGEIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSR--TRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNK 141          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C78A4_PINRA (Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.167e-12
Identity = 44/163 (26.99%), Postives = 87/163 (53.37%), Query Frame = 3
Query:  186 GRHKQ---LPPGPRPYPVIGNLLELGAK-PHKSLAKLAKIHGP--IMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDVGQAAFNTSLN 656
            GRHK+     PGP+ +P+IG+L+++    PH+ L  LA++HG   +MS  LG    V+ S P +A+ +L +    F +R + ++   L F     ++ + P    W+ LR+I++ H+F  +++ A++  R+  +  +L  ++    +   + V +     +LN
Sbjct:   70 GRHKRGRVAIPGPKGWPIIGSLMDMSVGLPHRKLESLARLHGAKQLMSFSLGCTPAVITSDPEVARELLTSPH--FANRPLKQSAQQLLFGR---AIGFAPNGGYWRLLRRIASAHLFAPRRIAAHEAGRQADVVAMLDDIQKEYHSKGVVRVRRHLQGAALN 227          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C7D95_MENSP (Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 8.813e-12
Identity = 51/176 (28.98%), Postives = 97/176 (55.11%), Query Frame = 3
Query:  108 MDLLIN-CILWLVFTLVWVMALSFVSRGRHKQ-LPPGPRPYPVIGNL-LELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDV 626
            M+L I+  I+ LV T V  + +    +   +Q LPPGP   P++G+L L  G  P  ++A +AK +GP+  ++LG+V +VV+SS    K  ++  D +  DR   E+I +    +    + + P S  W+ +RKI    + +++ + +   +R+ ++  LL H++ +  AG+ +D+
Sbjct:    1 MELQISSAIIILVATFVASLLIKQWRKSESRQNLPPGPPKLPLVGHLHLLWGKLPQHAMADMAKKYGPVTHVQLGEVFSVVLSSREATKEAMKLLDPACADRF--ESIGTRIMWYDNDDIIFSPYSDHWRQMRKICVSELLSARNVRSFGFIRQDEMSRLLRHLQSS--AGETVDM 172          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C519C_DICDI (Probable cytochrome P450 519C1 OS=Dictyostelium discoideum GN=cyp519c1 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 8.813e-12
Identity = 45/156 (28.85%), Postives = 81/156 (51.92%), Query Frame = 3
Query:  120 INCILWLVFTLVWVMALSFVSRGRHKQ--LPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLL 581
            +N +L + + LV  +   F+ + + K+  +P      P+IG+L +LG  PH++L KL + +G I SL LG + TV+V+ PS+ K I+     +F DR  P       F     +L ++  +  W  +RKI +  I  ++ +   +E+   + K L+
Sbjct:    1 MNILLLIFYFLVCFLIFDFIKKNKVKKYDVPTLSYALPIIGHLYKLGVNPHRNLTKLVEKNGGIFSLWLGDIKTVIVTDPSINKEIMVKQFTNFSDR--PRLKSFESFTGGGVNLIFIDYNEKWPVIRKIVSSSITKTKIISNYKEVIENQTKILI 154          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C516B_DICDI (Probable cytochrome P450 516B1 OS=Dictyostelium discoideum GN=cyp516b1 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 8.813e-12
Identity = 39/146 (26.71%), Postives = 77/146 (52.74%), Query Frame = 3
Query:  132 LWLVFTLVWVMALSFVSRGRHKQLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKI 569
            ++L+ +L+  +A     + R   +PPGP P P+IGNL +LG  P+KSL   +  +G + ++ LG V TV++S P++ + I+  ++ S  DR + ++ L +    +          + W   RKI +  +  ++K +    + ++ I
Sbjct:    1 MYLILSLIIFLAYVAFHKKRTNGMPPGPFPLPIIGNLHQLGKSPYKSLKSFSDKYGGLTTIFLGSVPTVLISEPNILREIIIKNNDSIIDRYISDSGLIIGGERN----LLFSKGSFWIKYRKIFSSAMTNARKFNIASRIEQQAI 142          
The following BLAST results are available for this feature:
BLAST of CF835257 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 124
Match NameE-valueIdentityDescription
C71AJ_ARATH2.319e-1225.14Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=C... [more]
C71AF_ARATH2.319e-1229.77Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=C... [more]
TCMO_ARATH3.029e-1231.29Trans-cinnamate 4-monooxygenase OS=Arabidopsis tha... [more]
C76A1_SOLME3.029e-1227.70Cytochrome P450 76A1 (Fragment) OS=Solanum melonge... [more]
TCMO_RUTGR3.956e-1234.72Trans-cinnamate 4-monooxygenase OS=Ruta graveolens... [more]
TCMO_CATRO3.956e-1232.86Trans-cinnamate 4-monooxygenase OS=Catharanthus ro... [more]
C78A4_PINRA5.167e-1226.99Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 P... [more]
C7D95_MENSP8.813e-1228.98Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D9... [more]
C519C_DICDI8.813e-1228.85Probable cytochrome P450 519C1 OS=Dictyostelium di... [more]
C516B_DICDI8.813e-1226.71Probable cytochrome P450 516B1 OS=Dictyostelium di... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06O20_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06O20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835257 ID=CF835257; Name=CF835257; organism=Citrus sinensis; type=EST; length=660bp
TTTTTTGGGTATCCATAAGAAGCACATGTAAACCAATGCGTGAAAAAACC
TATGTATAGATACGGGGTTACAGTGTGCTAAACCAAAATATCAACTTCAA
TTCAAAGATGGATTTGTTAATTAACTGCATACTGTGGCTTGTATTCACAT
TGGTTTGGGTGATGGCTTTAAGTTTCGTTTCCAGAGGACGACACAAACAG
CTTCCACCGGGACCGAGGCCTTATCCAGTGATCGGAAACCTTCTGGAGCT
AGGTGCTAAACCTCACAAGTCACTGGCCAAGCTTGCCAAGATTCATGGGC
CCATAATGAGTCTAAGACTTGGCCAGGTGACCACAGTAGTGGTTTCTTCT
CCAAGCATGGCCAAAGCCATCCTTCAAAATCATGATTTATCATTCTGTGA
TCGAATGGTCCCTGAAGCAATCTTGTCACTGCCCTTCCCGCACCATGAAT
TCAGTTTGGCCTGGCTTCCAGTTTCAACAATGTGGAAAAATCTTCGAAAA
ATAAGCAACATGCATATTTTCACTAGTCAGAAACTCGATGCCAATCAAGA
GCTCCGGCGCAAGAAAATCAAAGACCTTCTTGCTCATGTTGAAGACAATT
GCCGTGCGGGTAAAGCAATAGATGTTGGCCAAGCTGCTTTCAATACTTCA
CTTAATTTAT
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