CF835257

Overview
NameCF835257
Unique NameCF835257
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length660
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C82A3_SOYBN (Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.151e-11
Identity = 41/171 (23.98%), Postives = 83/171 (48.54%), Query Frame = 3
Query:  108 MDLLINCILWLVFTLVWVMALSFV------SRGRHKQLPPGPRPYPVIGNLLELGAK--PHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVED 596
            MDLL+NC+      +  +++L F+         R K  P     +P++G+L  L     PHK L  LA  +GP+ +++LG    +V+S+  M+K +   +DL+   R  P+ +      +++  +   P    W+ LRKI      ++++++    +R  +++  +  + D
Sbjct:    1 MDLLLNCLNLNTIAIASILSLIFLCLFLYRKNSRGKDAPVVSGAWPILGHLSLLNGSQTPHKVLGALADKYGPLFTIKLGMKPALVLSNWEMSKELFTTNDLAVSSR--PKLVAVEVMSYNQAFVGLAPYGPYWRELRKIVTFEFLSNRRIEQRNHIRVSEVRTSIKELFD 169          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C7D95_MENGR (Cytochrome P450 71D95 OS=Mentha gracilis GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.151e-11
Identity = 51/176 (28.98%), Postives = 97/176 (55.11%), Query Frame = 3
Query:  108 MDLLIN-CILWLVFTLVWVMALSFVSRGRHKQ-LPPGPRPYPVIGNL-LELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDV 626
            M+L I+  I+ LV T V  + +    +   +Q LPPGP   P++G+L L  G  P  ++A +AK +GP+  ++LG+V +VV+SS    K  ++  D +  DR   E+I +    +    + + P S  W+ +RKI    + +++ + +   +R+ ++  LL H++ +  AG+ +D+
Sbjct:    1 MELQISSAIIILVATFVASLLIKQWRKSESQQNLPPGPPKLPLVGHLHLLWGKLPQHAMADMAKKYGPVTHVQLGEVFSVVLSSREATKEAMKLLDPACADRF--ESIGTRIMWYDNDDIIFSPYSDHWRQMRKICVSELLSARNVRSFGFIRQDEMSRLLRHLQSS--AGETVDM 172          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C83B1_ARATH (Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CYP83B1 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.564e-11
Identity = 44/178 (24.72%), Postives = 95/178 (53.37%), Query Frame = 3
Query:  108 MDLLINCILWLVFTLVWVMALSFVSRGRHK--QLPPGPRPYPVIGNLLELGA-KPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDVGQ 632
            MDLL+     ++  LV   A  F+     K  +LPPGP+  P+IGNL ++    P   L +L+K++GPI ++++G     V+SS  +AK +L+  DL+F  R + +   ++ +   E  L +   +  ++ +RK+  +++F+  ++ + + +R ++ + ++  +         +D+ +
Sbjct:    1 MDLLL-----IIAGLVAAAAFFFLRSTTKKSLRLPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKGQQTMSYQGRE--LGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVDLSE 171          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C80A1_BERST (Berbamunine synthase OS=Berberis stolonifera GN=CYP80A1 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.564e-11
Identity = 44/178 (24.72%), Postives = 92/178 (51.69%), Query Frame = 3
Query:  144 FTLVWVMALSF--VSRGRHKQLPPGPRPYPVIGNLLELGAKPHKS----LAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDVGQAAFNTSLNL 659
            F  + ++AL +  + + +H  LPP P  +P++G+L +L +K        ++ +A+ +GP++ L+ G  +++  S+   A  +LQ +D     R  P     +  PH ++S+ W   ++ WK  RKI +  IF+ + L A ++ R +   +L+  +    + G  +++    F  +LN+
Sbjct:    7 FVSISLVALLYFLLFKPKHTNLPPSPPAWPIVGHLPDLISKNSPPFLDYMSNIAQKYGPLIHLKFGLHSSIFASTKEAAMEVLQTNDKVLSGRQ-PLPCFRIK-PHIDYSILWSDSNSYWKKGRKILHTEIFSQKMLQAQEKNRERVAGNLVNFI--MTKVGDVVELRSWLFGCALNV 180          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: TCMO_CICAR (Trans-cinnamate 4-monooxygenase OS=Cicer arietinum GN=CYP73A19 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 4.374e-11
Identity = 42/101 (41.58%), Postives = 57/101 (56.44%), Query Frame = 3
Query:  108 MDLLINCILWLVFTLVWVMALSFVS-RGRHKQLPPGPRPYPVIGNLLELGAK-PHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDR 404
            MDLL+     L   +   +A++    RG+  +LPPGP P PV GN L++G    H++L  LAK  G I  LR+GQ   VVVSSP +AK +L    + F  R
Sbjct:    1 MDLLLLEKTLLALFIAATIAITISKLRGKRFKLPPGPIPVPVFGNWLQVGDDLNHRNLTDLAKRFGDIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSR 101          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C82A4_SOYBN (Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.374e-11
Identity = 42/145 (28.97%), Postives = 79/145 (54.48%), Query Frame = 3
Query:  186 GRHKQLPPGPRPYPVIGNL-LELGAK-PHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGK 614
            G  K+ P     +P+ G+L L +G+K PHK+L  LA+ HGP+ +++LG    +VVS   MA+     +D++   R  P+ +++    ++   L   P    W+ LRKI    I +S +++  Q++R  ++++ +  + D  R+ K
Sbjct:   35 GSSKEAPTVGGAWPIFGHLPLLIGSKSPHKALGALAEKHGPLFTIKLGAKKALVVSDWEMARECFTTNDVAVSAR--PKLLVAELMCYNNAMLLVAPYGPYWRELRKIIVTEILSSSRVEQLQDVRVSEVQNSIVELYDVWRSQK 177          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C81E1_GLYEC (Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata GN=CYP81E1 PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 4.374e-11
Identity = 43/162 (26.54%), Postives = 81/162 (50.00%), Query Frame = 3
Query:  117 LINCILWLVFTLVWVMALSFVSRGRH-KQLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDN 599
            +++ + + VF L      + V R R  K LPPGP   P+IGNL  L    H++   L++ +G + SL  G    VVVSS S  +     +D+   +R  P  +      ++  +L        W+NLR+I+ + + ++ ++++   +RR + + L+  + D+
Sbjct:    3 ILSLLSYSVFYLALFFIFNIVIRARKFKNLPPGPPSLPIIGNLHHLKRPLHRTFKGLSEKYGHVFSLWFGSRLVVVVSSASEFQQCFTKNDVVLANR--PRFLSGKYIFYNYTTLGSTSYGEHWRNLRRITALDVLSNHRINSFSGIRRDETQRLITRLADD 162          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: TCMO_PETCR (Trans-cinnamate 4-monooxygenase OS=Petroselinum crispum GN=CYP73A10 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.713e-11
Identity = 45/140 (32.14%), Postives = 72/140 (51.43%), Query Frame = 3
Query:  114 LLINCILWLVFTLVWVMALSFVSRGRHKQLPPGPRPYPVIGNLLELGAKPH-KSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQ 530
            LL   +L L    +  + +S + RG+  +LPPGP P PV GN L++G   + ++L   AK  G +  LR+GQ   VVVSSP +AK +L    + F  R     ++   F      + +   S  W+ +R+I  +  FT++
Sbjct:    6 LLEKALLGLFIATIVAITISKL-RGKKLKLPPGPIPVPVFGNWLQVGDDLNQRNLVDYAKKFGDLFMLRMGQRNLVVVSSPELAKDVLHTQGVEFGSR--TRNVVFDIFTGKGQDMVFTVYSEHWRKMRRIMTVPFFTNK 142          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C71DF_MENPI (Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D15 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.713e-11
Identity = 44/144 (30.56%), Postives = 80/144 (55.56%), Query Frame = 3
Query:  198 QLPPGPRPYPVIGNL-LELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDV 626
            + PPGP   P+IG+L L  G  P  +LA +AK +GP+  ++LG+V +VV+SS    K  ++  D +  +R   E+I +    +    + + P S  W+ +RKI    + +S+ + +   +R+ ++  LL H+  +  AG A+D+
Sbjct:   34 KFPPGPPKLPLIGHLHLLWGKLPQHALASVAKEYGPVAHVQLGEVFSVVLSSREATKEAMKLVDPACANRF--ESIGTRIMWYDNEDIIFSPYSEHWRQMRKICVSELLSSRNVRSFGFIRQDEVSRLLRHLRSS--AGAAVDM 173          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C71BF_ARATH (Cytochrome P450 71B15 OS=Arabidopsis thaliana GN=CYP71B15 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.713e-11
Identity = 41/138 (29.71%), Postives = 75/138 (54.35%), Query Frame = 3
Query:  129 ILWLVFTLVWVMALSFVSRGRHKQLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDA 542
            + +LV   + ++ L+ +   ++K LPPGP+  P+IGNL +      ++   LA+++GP+  L+ G V  V +SS   A+ +L+ +DL  C R  PEA       ++   +   P    W  +RK+S + +F+ +KL +
Sbjct:    5 LCFLVLLPLILIFLNVLKPSKYK-LPPGPKKLPIIGNLHQRRTLHPRNRRNLAEMYGPVALLQYGFVPVVAISSKEAAEEVLKINDLECCSR--PEAAGMRATFYNFKDIGMAPFGDEWSLMRKLSVVELFSVKKLQS 139          
The following BLAST results are available for this feature:
BLAST of CF835257 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 124
Match NameE-valueIdentityDescription
C82A3_SOYBN1.151e-1123.98Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=... [more]
C7D95_MENGR1.151e-1128.98Cytochrome P450 71D95 OS=Mentha gracilis GN=CYP71D... [more]
C83B1_ARATH2.564e-1124.72Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CY... [more]
C80A1_BERST2.564e-1124.72Berbamunine synthase OS=Berberis stolonifera GN=CY... [more]
TCMO_CICAR4.374e-1141.58Trans-cinnamate 4-monooxygenase OS=Cicer arietinum... [more]
C82A4_SOYBN4.374e-1128.97Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=... [more]
C81E1_GLYEC4.374e-1126.54Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata ... [more]
TCMO_PETCR5.713e-1132.14Trans-cinnamate 4-monooxygenase OS=Petroselinum cr... [more]
C71DF_MENPI5.713e-1130.56Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D... [more]
C71BF_ARATH5.713e-1129.71Cytochrome P450 71B15 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06O20_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06O20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835257 ID=CF835257; Name=CF835257; organism=Citrus sinensis; type=EST; length=660bp
TTTTTTGGGTATCCATAAGAAGCACATGTAAACCAATGCGTGAAAAAACC
TATGTATAGATACGGGGTTACAGTGTGCTAAACCAAAATATCAACTTCAA
TTCAAAGATGGATTTGTTAATTAACTGCATACTGTGGCTTGTATTCACAT
TGGTTTGGGTGATGGCTTTAAGTTTCGTTTCCAGAGGACGACACAAACAG
CTTCCACCGGGACCGAGGCCTTATCCAGTGATCGGAAACCTTCTGGAGCT
AGGTGCTAAACCTCACAAGTCACTGGCCAAGCTTGCCAAGATTCATGGGC
CCATAATGAGTCTAAGACTTGGCCAGGTGACCACAGTAGTGGTTTCTTCT
CCAAGCATGGCCAAAGCCATCCTTCAAAATCATGATTTATCATTCTGTGA
TCGAATGGTCCCTGAAGCAATCTTGTCACTGCCCTTCCCGCACCATGAAT
TCAGTTTGGCCTGGCTTCCAGTTTCAACAATGTGGAAAAATCTTCGAAAA
ATAAGCAACATGCATATTTTCACTAGTCAGAAACTCGATGCCAATCAAGA
GCTCCGGCGCAAGAAAATCAAAGACCTTCTTGCTCATGTTGAAGACAATT
GCCGTGCGGGTAAAGCAATAGATGTTGGCCAAGCTGCTTTCAATACTTCA
CTTAATTTAT
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