CF835257

Overview
NameCF835257
Unique NameCF835257
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length660
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11430 contig Csv1_Contig11430:233..892. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C71DB_LOTJA (Cytochrome P450 71D11 (Fragment) OS=Lotus japonicus GN=CYP71D11 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.075e-17
Identity = 44/146 (30.14%), Postives = 86/146 (58.90%), Query Frame = 3
Query:  201 LPPGPRPYPVIGNLLEL-GAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDVGQA 635
            +PPGP   P+IG++  L G+ PH+ L  LAK +GP+M L+LG+V  ++VSS   AK +++ HD++F  R  P ++ +    +    + + P    W+ +RKI N+ + + +++ +   +R +++K+L+  +      G  +++ QA
Sbjct:   19 IPPGPWKLPIIGSIPHLVGSPPHRKLRDLAKKYGPLMHLQLGEVIFIIVSSAEYAKEVMKTHDVTFASR--PRSLFTDIVFYGSTDIGFSPYGDYWRQVRKICNVELLSMKRVQSLWPIREEEVKNLIQRIAS--EEGSVVNLSQA 160          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C71BZ_ARATH (Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=CYP71B38 PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 2.395e-17
Identity = 58/184 (31.52%), Postives = 104/184 (56.52%), Query Frame = 3
Query:  108 MDLLINCILWLVFTLVWVMALSFVSRGRHKQLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDVGQAAFNTSLNL 659
            M + +  +L L  +L+    L   S+G+   LPPGP   P+IGNL +LG   +KS  K+++ +GP++ LRLG V  +VVSS   A+ +L+ HDL  C R  P+   +  F ++   + + P    W+ +RKI+ + +F+ +KL + + +R ++ + L+  +       K++D  Q   N+S++L
Sbjct:    1 MSIFLCFLLLLPLSLILFKKL-LPSKGK---LPPGPIGLPIIGNLHQLGKLLYKSFHKISQEYGPVVLLRLGVVPVIVVSSKEGAEEVLKTHDLETCTR--PKTAATGLFTYNFKDIGFAPFGDDWREMRKITTLELFSVKKLKSFRYIREEESELLVKKI------SKSVDETQ---NSSVDL 169          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C71B4_ARATH (Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CYP71B4 PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 4.084e-17
Identity = 51/181 (28.18%), Postives = 93/181 (51.38%), Query Frame = 3
Query:  117 LINCILWLVFTLVWVMALSFVSRGRHKQLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDVGQAAFNTSLNL 659
            L++  L L+  + +++  +   +   + LPPGP   P+IGNL +L    HK L  L+K HGP+M LRLG    VV+SS   A+  L+ HDL  C R  P  + S  F  +   + +      W+ LRK+S    F+ +K+ + + +R ++   ++  +++       +D+ +  F  + ++
Sbjct:    4 LLSFFLLLLVPIFFLLIFTKKIKESKQNLPPGPAKLPIIGNLHQLQGLLHKCLHDLSKKHGPVMHLRLGFAPMVVISSSEAAEEALKTHDLECCSR--PITMASRVFSRNGKDIGFGVYGDEWRELRKLSVREFFSVKKVQSFKYIREEENDLMIKKLKELASKQSPVDLSKILFGLTASI 182          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C71BU_ARATH (Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=CYP71B31 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.335e-17
Identity = 47/155 (30.32%), Postives = 85/155 (54.84%), Query Frame = 3
Query:  195 KQLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDVGQAAFNTSLNL 659
            K+LPPGP   P+IGNL +LG   H SL KL+  HGP+M +R G V   V SS   AK +L+ HDL  C+R  P+ + +  F H    + +      W+ ++K   + +F+ +K  + + +R ++   L+  + +  +    +D+ ++ F+ + ++
Sbjct:   26 KKLPPGPTGLPLIGNLHQLGRLLHSSLHKLSLEHGPVMLVRWGVVPMAVFSSNEAAKEVLKTHDLETCNR--PKLVANGLFTHGYKDIGFTQYGEEWREMKKFVGLELFSPKKHKSFRYIREEEGDLLVKKISNYAQTQTLVDLRKSLFSYTASI 178          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C71AQ_ARATH (Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=CYP71A26 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.335e-17
Identity = 44/154 (28.57%), Postives = 85/154 (55.19%), Query Frame = 3
Query:  129 ILWLVFTLVWVMALSFVSRGRHKQLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHV 590
            +L  +  +V ++      RG+ +   P P   P+IGNL +LG  PH+SL  L+  +GP+M L  G+V  +VVSS  +A+ +L+ HD  F  R   +    L +  H+ + A  P    W+ ++ +  +H+F+++ + + +E+R ++I  ++  +
Sbjct:    7 LLCSIIFVVTIIIFRKQKRGKKRNTLPSPPGLPLIGNLHQLGRHPHRSLCSLSHRYGPLMLLHFGRVPVLVVSSAELARDVLKTHDRVFASRPRSKIFEKLLYDKHDVASA--PYGEYWRQMKSVCVLHLFSNKMVRSFREVREEEISLMMEKI 158          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C71A3_SOLME (Cytochrome P450 71A3 (Fragment) OS=Solanum melongena GN=CYP71A3 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 6.967e-17
Identity = 41/136 (30.15%), Postives = 82/136 (60.29%), Query Frame = 3
Query:  174 FVSRGRHKQLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLL 581
            F +   +K+LPP PR  P+IGNL +LG  PH+SL KL+K +GP+M L LG    +V SS    + I++ +DL + +R  P++ ++    +    +++ P    W+ +R I+ +H+ +++++ + +  R ++  +++
Sbjct:   16 FTTSNNNKKLPPSPRKLPIIGNLHQLGLHPHRSLHKLSKKYGPVMLLHLGSKPVIVASSVEAVRDIMKTNDLVWSNR--PKSKMADRLIYGSKDVSFSPHGEYWRQIRSITVLHLLSNKRVQSYRAAREEETSNMI 149          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C98A2_SOYBN (Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.188e-16
Identity = 56/184 (30.43%), Postives = 93/184 (50.54%), Query Frame = 3
Query:  132 LWLVFTLVWVMALSFVSRGRHKQLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRA----GKAI----DVGQAAFNTSLNL 659
            LWL +TL          R R K LPPGPRP+PV+GNL ++     +  A+ A+ +GPI+S+  G    V+VS+  +AK +L+ HD    DR    +  +  F      L W      +  +RK+  + +F+ ++L+A + +R  ++  ++  V ++C +    GK I     +G  AFN    L
Sbjct:   14 LWLGYTLY--------QRLRFK-LPPGPRPWPVVGNLYDIKPVRFRCFAEWAQSYGPIISVWFGSTLNVIVSNSELAKEVLKEHDQLLADRHRSRS--AAKFSRDGKDLIWADYGPHYVKVRKVCTLELFSPKRLEALRPIREDEVTSMVDSVYNHCTSTENLGKGILLRKHLGVVAFNNITRL 186          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C71AO_ARATH (Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=CYP71A24 PE=2 SV=3)

HSP 1 Score: 86.6557 bits (213), Expect = 1.188e-16
Identity = 47/162 (29.01%), Postives = 89/162 (54.94%), Query Frame = 3
Query:  105 KMDLLINCILWLVFTLVWVMALSFVSRGRHKQLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHV 590
            KM ++I  +L  +  L+ ++     SRG+    PP P   P+I NL +LG  PH+SL  L+  +GP+M L  G V  +VVSS   AK +L+ HD  F  R   +    + +   + +LA  P    W+ ++ +  +H+F+++ + + +++R+++I  ++  +
Sbjct:    2 KMMMMIILLLCSII-LITILFFKKQSRGKKSNAPPSPPRLPLIRNLHQLGRHPHRSLCSLSHRYGPLMLLHFGSVPVLVVSSADAAKDVLKTHDRVFASRPRSKIFDKIFYNGRDVALA--PYGEYWRQMKSVCVLHLFSNKMVRSFRDVRQEEISLMIEKI 160          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C99A1_SORBI (Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bicolor GN=CYP99A1 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.552e-16
Identity = 51/145 (35.17%), Postives = 79/145 (54.48%), Query Frame = 3
Query:  180 SRGRHKQLPPGPRPYPVIGNLLELG-AKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAG 611
            S G  K+ PPGP   P+IGNLL L  ++PH +L  LA  HGP+M LRLGQV  VV+SSP+ A+ +L++ D +F  R  P  +++    +    +++ P    W+ LRK+    +  + K+     +R  +   L+  V     AG
Sbjct:   20 SPGSKKKRPPGPWRLPLIGNLLHLATSQPHVALRDLAMKHGPVMYLRLGQVDAVVISSPAAAQEVLRDKDTTFASR--PSLLVADIILYGSMDMSFAPYGGNWRMLRKLCMSELLNTHKVRQLAAVRDSETLSLVRKVVYAAGAG 162          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C99A2_ORYSJ (Cytochrome P450 99A2 OS=Oryza sativa subsp. japonica GN=CYP99A2 PE=2 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 2.647e-16
Identity = 53/179 (29.61%), Postives = 96/179 (53.63%), Query Frame = 3
Query:   72 SVLNQNINFNSKMDLLINCILWL----VFTLVWVMALSFVSRGRHKQLPPGPRPYPVIGNLLEL-GAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVE 593
            ++L  N + N +  + IN    L    + TL  ++AL        K+ PPGP   P++G LL L  + P  +L +LA  +GP+M LR+GQ+ TVVVSSP+ A+ +L++ D+ F  R  P  ++S  F +    + + P    W+ LRK+  + + +++ +     +R  +   L+ +++
Sbjct:   12 NLLTNNPSSNPRFIMEINSAATLTLVSLLTLPILLALLTRKSSSKKRRPPGPWNLPLVGGLLHLLRSHPQVALRELASKYGPVMFLRMGQIDTVVVSSPAAAQEVLRDKDVMFASR--PSLLVSEIFCYDNLDVGFAPYGAYWRMLRKLCTVELLSTKVVRQLAPVRNDETLTLVRNIK 188          
The following BLAST results are available for this feature:
BLAST of CF835257 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 124
Match NameE-valueIdentityDescription
C71DB_LOTJA1.075e-1730.14Cytochrome P450 71D11 (Fragment) OS=Lotus japonicu... [more]
C71BZ_ARATH2.395e-1731.52Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=C... [more]
C71B4_ARATH4.084e-1728.18Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CY... [more]
C71BU_ARATH5.335e-1730.32Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=C... [more]
C71AQ_ARATH5.335e-1728.57Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=C... [more]
C71A3_SOLME6.967e-1730.15Cytochrome P450 71A3 (Fragment) OS=Solanum melonge... [more]
C98A2_SOYBN1.188e-1630.43Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=... [more]
C71AO_ARATH1.188e-1629.01Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=C... [more]
C99A1_SORBI1.552e-1635.17Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bico... [more]
C99A2_ORYSJ2.647e-1629.61Cytochrome P450 99A2 OS=Oryza sativa subsp. japoni... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06O20_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06O20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835257 ID=CF835257; Name=CF835257; organism=Citrus sinensis; type=EST; length=660bp
TTTTTTGGGTATCCATAAGAAGCACATGTAAACCAATGCGTGAAAAAACC
TATGTATAGATACGGGGTTACAGTGTGCTAAACCAAAATATCAACTTCAA
TTCAAAGATGGATTTGTTAATTAACTGCATACTGTGGCTTGTATTCACAT
TGGTTTGGGTGATGGCTTTAAGTTTCGTTTCCAGAGGACGACACAAACAG
CTTCCACCGGGACCGAGGCCTTATCCAGTGATCGGAAACCTTCTGGAGCT
AGGTGCTAAACCTCACAAGTCACTGGCCAAGCTTGCCAAGATTCATGGGC
CCATAATGAGTCTAAGACTTGGCCAGGTGACCACAGTAGTGGTTTCTTCT
CCAAGCATGGCCAAAGCCATCCTTCAAAATCATGATTTATCATTCTGTGA
TCGAATGGTCCCTGAAGCAATCTTGTCACTGCCCTTCCCGCACCATGAAT
TCAGTTTGGCCTGGCTTCCAGTTTCAACAATGTGGAAAAATCTTCGAAAA
ATAAGCAACATGCATATTTTCACTAGTCAGAAACTCGATGCCAATCAAGA
GCTCCGGCGCAAGAAAATCAAAGACCTTCTTGCTCATGTTGAAGACAATT
GCCGTGCGGGTAAAGCAATAGATGTTGGCCAAGCTGCTTTCAATACTTCA
CTTAATTTAT
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