CF835257

Overview
NameCF835257
Unique NameCF835257
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length660
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11430 contig Csv1_Contig11430:233..892. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C75A6_CAMME (Flavonoid 3',5'-hydroxylase OS=Campanula medium GN=CYP75A6 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.647e-16
Identity = 48/145 (33.10%), Postives = 80/145 (55.17%), Query Frame = 3
Query:  192 HKQLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDV 626
            H  LPPGP  +P+IG L  LG  PH SLA +A  +GPIM L+LG   TVV S+P  A+A L+ HD +F +R +      L +   +  + +      WK LRK+ ++H+   + L+    ++  ++  +L  + +  ++ K++ V
Sbjct:   35 HHHLPPGPTGWPIIGALPLLGTMPHVSLADMAVKYGPIMYLKLGSKGTVVASNPKAARAFLKTHDANFSNRPIDGGPTYLAYNAQD--MVFAEYGPKWKLLRKLCSLHMLGPKALEDWAHVKVSEVGHMLKEMYE--QSSKSVPV 175          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C71AR_ARATH (Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=CYP71A27 PE=2 SV=3)

HSP 1 Score: 85.5001 bits (210), Expect = 2.647e-16
Identity = 51/176 (28.98%), Postives = 94/176 (53.41%), Query Frame = 3
Query:  105 KMDLLINCILWLVFTLVWVMALSFVSRGRHKQLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDVGQ 632
            +M L+  C+  L+  L     L  ++  + K LPP P   PVIGNL +LG  PH+ L  L+  +GP+M L  G+V  +VVS P +   I++ HDL F +R   +AI    F      + + P    WK+++ +  +H+  ++ + + + LR ++IK +   +E+   +  ++++ +
Sbjct:    2 EMILISLCLTTLLAFLFLKPLLKRITTTKPK-LPPSPWRLPVIGNLHQLGPNPHRYLHSLSLRYGPLMLLHFGRVPVLVVSCPDVTNDIMKTHDLKFANRPKSKAINI--FMEGGRDIIFGPYGEDWKSMKSLGVVHLLNNKMVRSFENLREEEIKVMTEKLEEASSSSSSVNLSK 174          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C71B8_ARATH (Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CYP71B8 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.458e-16
Identity = 47/149 (31.54%), Postives = 81/149 (54.36%), Query Frame = 3
Query:  198 QLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDVGQAAFN 644
            +LPPGP   P+IGNL +LG   H S  KL+  HGP+M LR G V  VV+SS   AK +L++ DL  C R  P+ + +  F  +   +A+      W+ ++K+  + +F  +K    + +R ++   L+  +  + +    +D+ +A F+
Sbjct:   29 KLPPGPTGLPIIGNLHQLGRLLHSSFHKLSLEHGPVMLLRFGVVPMVVISSKEAAKQVLKSRDLETCSR--PKLVANGLFTRNFKDIAFAQYGEDWREMKKLVGLELFNPKKHKFFRYIREEEGDLLVKKLSKSSQTQTLVDLRKAFFS 175          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C71A6_NEPRA (Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa GN=CYP71A6 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.458e-16
Identity = 46/147 (31.29%), Postives = 82/147 (55.78%), Query Frame = 3
Query:  138 LVFTLVWVMALSFVSRGRH----KQLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKK 566
            L+  L  +  L F+ + R     K  PP P   PV+GNL +LG  PH+SL  L++ +GP+M L  G V  +V SSP  A+ I++N DL+F +R        L + +H+  +A+ P    W+ +R I  + + +++++ + + +R ++
Sbjct:    2 LIALLCTLPFLFFLKKWRRSYSGKTPPPSPPKLPVLGNLHQLGTFPHRSLQSLSRRYGPVMQLHFGSVPVLVASSPEAAREIMKNQDLNFSNRPNLSIPRRLLYDNHD--VAFAPYGEYWRQIRSICVLQLLSNKRVQSFRRVREEE 146          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C71BP_ARATH (Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=CYP71B25 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.516e-16
Identity = 48/178 (26.97%), Postives = 91/178 (51.12%), Query Frame = 3
Query:  108 MDLLINCILWLVFTLVWVMALSFVSRGRHKQLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDVGQAAF 641
            M +L + +L L    ++ +  +   +   + LPPGP   P++GNL +L    H+ L +L+K HGP+M L+LG V  V++SS   A+  L+ HD+  C R  P    +  F  +  ++     S  W+ LRK++    F+ +K+ + + +R ++   ++  + D       +D+ +  F
Sbjct:    1 MAILQSFLLLLSLPFLFTLIYTKKMKESKRNLPPGPAKLPIVGNLHQLQGMVHRCLHELSKKHGPVMHLQLGFVPLVLISSSEAAEEALKTHDIECCTR--PNTNAARVFSRNNKNIGLGAYSDEWRELRKVAVREYFSVKKVQSFRYVREEENHLMVKKLRDLALKQSPVDLSKTLF 176          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C71AM_ARATH (Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=CYP71A22 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.516e-16
Identity = 44/162 (27.16%), Postives = 87/162 (53.70%), Query Frame = 3
Query:  108 MDLLINCILWLVFTLVWVMALSFVSRGRHKQLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVE 593
            M+ +I  IL  +   + ++      +G+    P  P   P+IGNL +LG  PH+SL  L+  +GP+M LR G V  +VVSS  +A+ IL+ +D  F  R   +    + +   + +LA  P    W+ ++ +  +H+ T++ + + + +R+++I  ++  ++
Sbjct:    1 MESMIRIILLSLIIFITILFFIKQKKGKKSNTPASPPRLPLIGNLHQLGRHPHRSLCSLSNRYGPLMLLRFGLVPVLVVSSADVARDILKTYDRVFASRPRSKIFEKIFYEARDVALA--PYGEYWRQMKSVCVLHLLTNKMVRSFRNVRQEEISLMMEKIQ 160          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C99A3_ORYSJ (Cytochrome P450 99A3 OS=Oryza sativa subsp. japonica GN=CYP99A3 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 7.703e-16
Identity = 49/152 (32.24%), Postives = 85/152 (55.92%), Query Frame = 3
Query:  141 VFTLVWVMALSFVSRGRHKQLPPGPRPYPVIGNLLEL-GAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVE 593
            V TL  ++AL        K+ PPGP   P++G LL L  ++P  +L  LA  +GP+M LR GQV TVV+SSP+ A+ +L++ D++F  R  P  ++S  F +    + + P    W+ LRK+  + + +++ +     +R  +   L+ ++E
Sbjct:   15 VVTLPILLALLTRKSSSKKRRPPGPWNLPLVGGLLHLLRSQPQVALRDLAGKYGPVMFLRTGQVDTVVISSPAAAQEVLRDKDVTFASR--PSLLVSEIFCYGNLDIGFAPYGAYWRMLRKLCTVELLSTKMVRQLAPIRDGETLALVRNIE 164          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C93B1_GLYEC (Licodione synthase OS=Glycyrrhiza echinata GN=CYP93B1 PE=1 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 7.703e-16
Identity = 50/156 (32.05%), Postives = 85/156 (54.49%), Query Frame = 3
Query:  195 KQLPPGPR-PYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDVGQAAFNTSLNL 659
            K LPP P    P+IG++  LG   H+S   L+  +GP+ SL  G V  VV S+P  AK +LQ ++L+F  R+   A+  L +   E SLA+ P    W+ ++K+S   +  S+ ++  Q LR ++   LL  + +  RA +A+++ +     + N+
Sbjct:   30 KNLPPSPFFRLPIIGHMHMLGPLLHQSFHNLSHRYGPLFSLNFGSVLCVVASTPHFAKQLLQTNELAFNCRIESTAVKKLTY---ESSLAFAPYGDYWRFIKKLSMNELLGSRSINNFQHLRAQETHQLLRLLSNRARAFEAVNITEELLKLTNNV 182          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C71AI_ARATH (Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=CYP71A18 PE=2 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.006e-15
Identity = 49/164 (29.88%), Postives = 91/164 (55.49%), Query Frame = 3
Query:  105 KMDLLINCILWLVFTLVWVMALSFVSRGRHK-QLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVE 593
            +M L+++  L  + TL+  +   F+ R   K  LPP P   PVIGNL +L   PH+SL  L+  +GP+M L  G+V  +VVSS   A  IL+ HDL F +R   +A+  L     +  + + P    W+ ++ +  +++ T++ + + +++R +++  ++  +E
Sbjct:    2 EMTLMVSLCLTTLLTLL--LLKKFLKRTAKKVNLPPSPWRIPVIGNLHQLSLHPHRSLHSLSLRYGPLMLLHFGRVPILVVSSSEAAHEILKTHDLKFANRPKSKAVHGLMNGGRD--VVFGPYGEYWRQMKSVCILNLLTNKMVASFEKVREEEVNAMMEKLE 161          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C71AC_ARATH (Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=CYP71A12 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.006e-15
Identity = 45/163 (27.61%), Postives = 91/163 (55.83%), Query Frame = 3
Query:  108 MDLLINCILWLVFTLVWVMALSFVSRGRHK-QLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVE 593
            M++++   L L   +   +   F+ R  +K  LPP P   P+IGNL +L   PH+SL  L+  +GP+M L  G+V  +VVSS   A+ +L+ HDL F +R   +A+  L     +  + + P    W+ ++ +  +++ T++ + + +++R +++ +++  +E
Sbjct:    1 MEMILMVSLCLTTLITLFLLKQFLKRTANKVNLPPSPWRLPLIGNLHQLSLHPHRSLHSLSLRYGPLMLLHFGRVPILVVSSGEAAQEVLKTHDLKFANRPRSKAVHGLMNGGRD--VVFGPYGEYWRQMKSVCILNLLTNKMVASFEKIREEELNEMIKKLE 161          
The following BLAST results are available for this feature:
BLAST of CF835257 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 124
Match NameE-valueIdentityDescription
C75A6_CAMME2.647e-1633.10Flavonoid 3',5'-hydroxylase OS=Campanula medium GN... [more]
C71AR_ARATH2.647e-1628.98Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=C... [more]
C71B8_ARATH3.458e-1631.54Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CY... [more]
C71A6_NEPRA3.458e-1631.29Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa... [more]
C71BP_ARATH4.516e-1626.97Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=C... [more]
C71AM_ARATH4.516e-1627.16Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=C... [more]
C99A3_ORYSJ7.703e-1632.24Cytochrome P450 99A3 OS=Oryza sativa subsp. japoni... [more]
C93B1_GLYEC7.703e-1632.05Licodione synthase OS=Glycyrrhiza echinata GN=CYP9... [more]
C71AI_ARATH1.006e-1529.88Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=C... [more]
C71AC_ARATH1.006e-1527.61Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06O20_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06O20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835257 ID=CF835257; Name=CF835257; organism=Citrus sinensis; type=EST; length=660bp
TTTTTTGGGTATCCATAAGAAGCACATGTAAACCAATGCGTGAAAAAACC
TATGTATAGATACGGGGTTACAGTGTGCTAAACCAAAATATCAACTTCAA
TTCAAAGATGGATTTGTTAATTAACTGCATACTGTGGCTTGTATTCACAT
TGGTTTGGGTGATGGCTTTAAGTTTCGTTTCCAGAGGACGACACAAACAG
CTTCCACCGGGACCGAGGCCTTATCCAGTGATCGGAAACCTTCTGGAGCT
AGGTGCTAAACCTCACAAGTCACTGGCCAAGCTTGCCAAGATTCATGGGC
CCATAATGAGTCTAAGACTTGGCCAGGTGACCACAGTAGTGGTTTCTTCT
CCAAGCATGGCCAAAGCCATCCTTCAAAATCATGATTTATCATTCTGTGA
TCGAATGGTCCCTGAAGCAATCTTGTCACTGCCCTTCCCGCACCATGAAT
TCAGTTTGGCCTGGCTTCCAGTTTCAACAATGTGGAAAAATCTTCGAAAA
ATAAGCAACATGCATATTTTCACTAGTCAGAAACTCGATGCCAATCAAGA
GCTCCGGCGCAAGAAAATCAAAGACCTTCTTGCTCATGTTGAAGACAATT
GCCGTGCGGGTAAAGCAATAGATGTTGGCCAAGCTGCTTTCAATACTTCA
CTTAATTTAT
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