CF835257

Overview
NameCF835257
Unique NameCF835257
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length660
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11430 contig Csv1_Contig11430:233..892. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C71AD_ARATH (Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=CYP71A13 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.314e-15
Identity = 45/163 (27.61%), Postives = 90/163 (55.21%), Query Frame = 3
Query:  108 MDLLINCILWLVFTLVWVMALSFVSRGRHK-QLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVE 593
            M+++++  L L   +  ++   F+ R   K  LPP P   PVIGNL +L   PH+SL  L+  +GP+M L  G+V  +VVSS   A+ +L+ HD  F +R   +A+  L     +  + + P    W+ ++ +  +++ T++ +++ +++R  ++  ++  +E
Sbjct:    1 MEMILSISLCLTTLITLLLLRRFLKRTATKVNLPPSPWRLPVIGNLHQLSLHPHRSLRSLSLRYGPLMLLHFGRVPILVVSSGEAAQEVLKTHDHKFANRPRSKAVHGLMNGGRD--VVFAPYGEYWRQMKSVCILNLLTNKMVESFEKVREDEVNAMIEKLE 161          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C98A1_SORBI (Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.716e-15
Identity = 49/152 (32.24%), Postives = 85/152 (55.92%), Query Frame = 3
Query:  162 MALSFVSRGRHKQLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKA 617
            ++L+ ++R R  +LPPGPRP+PV+GNL ++     +   + A+ +GP++S+  G   TVVVS+  +AK +L+ +D    DR  P    +  F  +   L W      +  +RK+ N+ +FT ++L+A + +R  ++    A VE   RA  A
Sbjct:   18 LSLALLNRLRLGRLPPGPRPWPVLGNLRQIKPIRCRCFQEWAERYGPVISVWFGSGLTVVVSTSELAKEVLKENDQQLADR--PRNRSTQRFSRNGQDLIWADYGPHYIKVRKLCNLELFTPKRLEALRPIREDEV---TAMVESVYRAATA 164          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C71A2_SOLME (Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71A2 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.716e-15
Identity = 41/160 (25.62%), Postives = 89/160 (55.62%), Query Frame = 3
Query:  180 SRGRHKQLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDVGQAAFNTSLNL 659
            S+ ++  L P PR  P+IGNL +LG+ PH+SL KL++ +GP+M L  G    +V SS   A+ I++ HD+ +  R  P++ +     +    + + P    W+  + I+ +H+ ++ ++ + + +R ++  +++  +   C +   I++G+   + + N+
Sbjct:   30 SKKQNMLLLPSPRKLPIIGNLHQLGSLPHRSLHKLSQKYGPVMLLHFGSKPVIVASSVDAARDIMKTHDVVWASR--PKSSIVDRLSYGSKDVGFSPFGEYWRRAKSITVLHLLSNTRVQSYRNVRAEETANMIGKIRQGCDS-SVINLGEHLCSLTNNI 186          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C83A1_ARATH (Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CYP83A1 PE=1 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 2.927e-15
Identity = 47/152 (30.92%), Postives = 81/152 (53.29%), Query Frame = 3
Query:  198 QLPPGPRPYPVIGNLLELGA-KPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEF------SLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDVGQ 632
            +LPPGP P PVIGNLL+L    P +  A  AK +GPI+S R+G  T VV+SS  +AK +L+  D++F DR         P   HEF       +A    +  ++ +RK+   H+F+  ++   + +R ++ + ++  +       + +D+ +
Sbjct:   29 KLPPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRP--------PHRGHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISE 172          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C71BS_ARATH (Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=CYP71B28 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.927e-15
Identity = 52/169 (30.77%), Postives = 88/169 (52.07%), Query Frame = 3
Query:  198 QLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRR-------KKIKDL-----LAHVEDN---------CRAGKAIDVGQAAF 641
            +LPPGP+  P+IGNL +      ++   L++ +GPI+ LR G V  VV+SS   A+ +L+ HDL  C R  PE + +    ++   + + P    W+ +RK+S + +F+S+KL + + +R        KK+ DL     L ++E           CR G  I++ +  F
Sbjct:   27 KLPPGPKKLPIIGNLHQRRELHPRNSRNLSEKYGPIVFLRYGFVPVVVISSKEAAEEVLKTHDLECCSR--PETVGTRAISYNFKDIGFAPYGEDWRTMRKLSVVELFSSKKLQSFRYIREEENDLCVKKLSDLASRRSLVNLEKTLFTLVGSIVCRIGFGINLRECEF 193          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C71AL_ARATH (Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=CYP71A21 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.927e-15
Identity = 44/162 (27.16%), Postives = 86/162 (53.09%), Query Frame = 3
Query:  108 MDLLINCILWLVFTLVWVMALSFVSRGRHKQLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVE 593
            M+ +   IL  +   + ++      RG+    P  P   P+IGNL +LG  PH+SL  L+  +GP+M L LG+V  +VVSS  +A+ IL+ HD  F  R  P + L     +    +A+ P    W+ ++ +  + + +++ + + + +R+++I  ++  ++
Sbjct:    1 MESMTMIILQSLIIFITILFFKKQKRGKKSNTPRSPPRLPLIGNLHQLGHHPHRSLCSLSHRYGPLMLLHLGRVPVLVVSSADVARDILKTHDRVFASR--PRSKLFEKLFYDGRDVAFAPYGEYWRQIKSVCVLRLLSNKMVTSFRNVRQEEISLMMEKIQ 160          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C98A3_ARATH (Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CYP98A3 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.823e-15
Identity = 44/154 (28.57%), Postives = 83/154 (53.90%), Query Frame = 3
Query:  141 VFTLVWVMALSFVSRGRHKQLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNC 602
            V T+  V++   + R R+K  PPGP P P++GNL ++     +   + A+ +GPI+S+ +G +  VVVSS  +AK +L+ HD    DR    +  +  F  +   L W      +  +RK+  + +FT ++L++ + +R  ++  ++  V  +C
Sbjct:    8 VATIAAVVSYKLIQRLRYK-FPPGPSPKPIVGNLYDIKPVRFRCYYEWAQSYGPIISVWIGSILNVVVSSAELAKEVLKEHDQKLADRHRNRS--TEAFSRNGQDLIWADYGPHYVKVRKVCTLELFTPKRLESLRPIREDEVTAMVESVFRDC 158          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C71BO_ARATH (Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=CYP71B24 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.823e-15
Identity = 48/150 (32.00%), Postives = 79/150 (52.67%), Query Frame = 3
Query:  192 HKQLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDVGQAAF 641
            ++ LPP P   PVIGNL +L    HK L  L+K HGP++ LRLG +  VV+SS   A+  L+ HDL  C R +      L     +  LA  P     + LRK+S +  F++ K+ + + +R ++   ++  +++      ++D+ Q  F
Sbjct:   23 NRNLPPSPLKLPVIGNLYQLRGLFHKCLHDLSKKHGPVLLLRLGFLDMVVISSTEAAEEALKVHDLECCTRPITNVTSKLWRDGQDIGLA--PYGESLRELRKLSFLKFFSTTKVRSFRYIREEENDLMVKKLKEAALKKSSVDLSQTLF 170          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C93A3_SOYBN (Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 4.993e-15
Identity = 53/175 (30.29%), Postives = 83/175 (47.43%), Query Frame = 3
Query:  138 LVFTLVWVMALSFVSRGRHKQLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMV-PEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDVGQAAFNTSLNL 659
            L+ T+V+   L          LPP P P P+IG+L  L   PH+   KL+  +GPI+ L LG V  VV S+   AK  L+ H+ +F +R     A+ +L +   +F  A  P    WK ++K+    +     LD    +R+ + K  +  V     +G+A+D G      S N+
Sbjct:   10 LISTIVFASILWRKQNKNKTLLPPSPMPLPIIGHLHLLSPTPHQDFHKLSLRYGPIIHLFLGSVPCVVASTAEAAKEFLKTHEPAFSNRPANTVAVETLTYGFQDFLFA--PYGPYWKFMKKLCMSELLGGHMLDQFLPVRQXETKKFIKRVLQKGISGEAVDFGGEFITLSNNI 182          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C71D9_SOYBN (Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 4.993e-15
Identity = 44/130 (33.85%), Postives = 74/130 (56.92%), Query Frame = 3
Query:  201 LPPGPRPYPVIGNLLELGAKP--HKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEF-SLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLL 581
            LPPGP   P+IGN+  L   P  H  L  L+  +G +M L+LG+V+T+VVSSP  AK +++ HD  F  R     +L+     ++F  +A+ P    W+ LRKI  + + +S+++ + Q +R + +   +
Sbjct:   35 LPPGPWKLPIIGNMHNLVGSPLPHHRLRDLSAKYGSLMHLKLGEVSTIVVSSPEYAKEVMKTHDHIFASR---PYVLAAEIMDYDFKGVAFTPYGDYWRQLRKIFALELLSSKRVQSFQPIREEVLTSFI 161          
The following BLAST results are available for this feature:
BLAST of CF835257 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 124
Match NameE-valueIdentityDescription
C71AD_ARATH1.314e-1527.61Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=C... [more]
C98A1_SORBI1.716e-1532.24Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1... [more]
C71A2_SOLME1.716e-1525.63Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71... [more]
C83A1_ARATH2.927e-1530.92Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CY... [more]
C71BS_ARATH2.927e-1530.77Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=C... [more]
C71AL_ARATH2.927e-1527.16Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=C... [more]
C98A3_ARATH3.823e-1528.57Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CY... [more]
C71BO_ARATH3.823e-1532.00Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=C... [more]
C93A3_SOYBN4.993e-1530.29Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=... [more]
C71D9_SOYBN4.993e-1533.85Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06O20_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06O20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835257 ID=CF835257; Name=CF835257; organism=Citrus sinensis; type=EST; length=660bp
TTTTTTGGGTATCCATAAGAAGCACATGTAAACCAATGCGTGAAAAAACC
TATGTATAGATACGGGGTTACAGTGTGCTAAACCAAAATATCAACTTCAA
TTCAAAGATGGATTTGTTAATTAACTGCATACTGTGGCTTGTATTCACAT
TGGTTTGGGTGATGGCTTTAAGTTTCGTTTCCAGAGGACGACACAAACAG
CTTCCACCGGGACCGAGGCCTTATCCAGTGATCGGAAACCTTCTGGAGCT
AGGTGCTAAACCTCACAAGTCACTGGCCAAGCTTGCCAAGATTCATGGGC
CCATAATGAGTCTAAGACTTGGCCAGGTGACCACAGTAGTGGTTTCTTCT
CCAAGCATGGCCAAAGCCATCCTTCAAAATCATGATTTATCATTCTGTGA
TCGAATGGTCCCTGAAGCAATCTTGTCACTGCCCTTCCCGCACCATGAAT
TCAGTTTGGCCTGGCTTCCAGTTTCAACAATGTGGAAAAATCTTCGAAAA
ATAAGCAACATGCATATTTTCACTAGTCAGAAACTCGATGCCAATCAAGA
GCTCCGGCGCAAGAAAATCAAAGACCTTCTTGCTCATGTTGAAGACAATT
GCCGTGCGGGTAAAGCAATAGATGTTGGCCAAGCTGCTTTCAATACTTCA
CTTAATTTAT
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